Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07155

Experiment: R2A pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A pH7
1,532,426	+		LRK54_RS07145	0.84	-0.0
1,532,426	+		LRK54_RS07145	0.84	+0.4
1,532,426	+		LRK54_RS07145	0.84	+1.3
1,532,426	+		LRK54_RS07145	0.84	-0.6
1,532,426	+		LRK54_RS07145	0.84	+0.3
1,532,426	+		LRK54_RS07145	0.84	+0.1
1,532,426	+		LRK54_RS07145	0.84	+2.1
1,532,426	+		LRK54_RS07145	0.84	-0.7
1,532,426	+		LRK54_RS07145	0.84	+0.0
1,532,426	+		LRK54_RS07145	0.84	+0.4
1,532,426	+		LRK54_RS07145	0.84	-0.7
1,532,426	+		LRK54_RS07145	0.84	-2.3
1,532,426	+		LRK54_RS07145	0.84	+0.8
1,532,426	+		LRK54_RS07145	0.84	-0.1
1,532,426	+		LRK54_RS07145	0.84	+1.4
1,532,426	+		LRK54_RS07145	0.84	+1.9
1,532,426	+		LRK54_RS07145	0.84	-0.3
1,532,426	+		LRK54_RS07145	0.84	-0.1
1,532,426	+		LRK54_RS07145	0.84	-1.5
1,532,426	+		LRK54_RS07145	0.84	+0.1
1,532,426	+		LRK54_RS07145	0.84	-0.6
1,532,426	+		LRK54_RS07145	0.84	-1.2
1,532,426	+		LRK54_RS07145	0.84	-0.4
1,532,427	-		LRK54_RS07145	0.84	+0.2
1,532,427	-		LRK54_RS07145	0.84	+0.4
1,532,427	-		LRK54_RS07145	0.84	-0.4
1,532,427	-		LRK54_RS07145	0.84	-0.7
1,532,427	-		LRK54_RS07145	0.84	+1.0
1,532,427	-		LRK54_RS07145	0.84	-1.1
1,532,427	-		LRK54_RS07145	0.84	-0.4
1,532,427	-		LRK54_RS07145	0.84	+0.9
1,532,427	-		LRK54_RS07145	0.84	-0.7
1,532,427	-		LRK54_RS07145	0.84	+0.3
1,532,427	-		LRK54_RS07145	0.84	+0.2
1,532,427	-		LRK54_RS07145	0.84	+0.2
1,532,427	-		LRK54_RS07145	0.84	+0.3
1,532,427	-		LRK54_RS07145	0.84	+0.6
1,532,427	-		LRK54_RS07145	0.84	-1.0
1,532,427	-		LRK54_RS07145	0.84	-0.3
1,532,427	-		LRK54_RS07145	0.84	-0.4
1,532,427	-		LRK54_RS07145	0.84	+0.4
1,532,427	-		LRK54_RS07145	0.84	-0.3
1,532,427	-		LRK54_RS07145	0.84	-0.1
1,532,427	-		LRK54_RS07145	0.84	+0.1
1,532,427	-		LRK54_RS07145	0.84	+0.5
1,532,427	-		LRK54_RS07145	0.84	-1.4
1,532,427	-		LRK54_RS07145	0.84	-0.8
1,532,427	-		LRK54_RS07145	0.84	+0.6
1,532,427	-		LRK54_RS07145	0.84	+2.1
1,532,427	-		LRK54_RS07145	0.84	+0.1
1,532,427	-		LRK54_RS07145	0.84	+2.1
1,532,427	-		LRK54_RS07145	0.84	+0.2
1,532,427	-		LRK54_RS07145	0.84	-0.0
1,532,427	-		LRK54_RS07145	0.84	-0.1
1,532,427	-		LRK54_RS07145	0.84	+0.6
1,532,427	-		LRK54_RS07145	0.84	-0.1
1,532,427	-		LRK54_RS07145	0.84	+0.7
1,532,427	-		LRK54_RS07145	0.84	-0.3
1,532,427	-		LRK54_RS07145	0.84	+1.8
1,532,427	-		LRK54_RS07145	0.84	-1.3
1,532,507	+		LRK54_RS07145	0.89	+0.4
1,532,507	+		LRK54_RS07145	0.89	-0.2
1,532,507	+		LRK54_RS07145	0.89	+0.2
1,532,507	+		LRK54_RS07145	0.89	+0.1
1,532,508	-		LRK54_RS07145	0.90	+1.2
1,532,508	-		LRK54_RS07145	0.90	-0.3
1,532,508	-		LRK54_RS07145	0.90	+1.2
1,532,508	-		LRK54_RS07145	0.90	-0.6
1,532,508	-		LRK54_RS07145	0.90	-0.1
1,532,508	-		LRK54_RS07145	0.90	+0.6
1,532,508	-		LRK54_RS07145	0.90	-0.3
1,532,668	+				-0.1
1,532,668	+				+0.2
1,532,668	+				+0.2
1,532,668	+				-0.1
1,532,669	-				-1.5
1,532,669	-				+0.2
1,532,669	-				-0.1
1,532,669	-				-0.7
1,532,700	+				+0.5
1,532,700	+				-0.3
1,532,701	-				-1.2
1,532,710	+				+0.1
1,532,710	+				+0.2
1,532,710	+				-0.5
1,532,710	+				-2.5
1,532,710	+				-0.4
1,532,710	+				+0.4
1,532,711	-				+0.1
1,532,711	-				+0.5
1,532,711	-				+0.3
1,532,735	+				-1.9
1,532,735	+				-0.1
1,532,735	+				+0.9
1,532,735	+				+1.1
1,532,735	+				-1.0
1,532,735	+				-0.4
1,532,735	+				-0.5
1,532,735	+				+0.2
1,532,735	+				-1.1
1,532,735	+				-1.9
1,532,735	+				-2.0
1,532,735	+				-2.0
1,532,735	+				-1.0
1,532,735	+				-0.4
1,532,735	+				-1.6
1,532,735	+				-0.4
1,532,735	+				+0.3
1,532,736	-				+1.6
1,532,736	-				+0.0
1,532,736	-				+1.0
1,532,736	-				+0.2
1,532,736	-				-0.5
1,532,736	-				+0.8
1,532,736	-				-0.8
1,532,736	-				-0.2
1,532,736	-				+1.8
1,532,736	-				+0.5
1,532,736	-				-0.7
1,532,805	+				+1.5
1,532,807	+				+0.8
1,532,807	+				+0.7
1,532,807	+				-1.1
1,532,807	+				+0.2
1,532,807	+				-0.8
1,532,807	+				-1.0
1,532,807	+				+0.3
1,532,807	+				+0.1
1,532,807	+				-1.2
1,532,807	+				-2.0
1,532,807	+				-0.4
1,532,807	+				+0.5
1,532,808	-				+1.3
1,532,808	-				+0.8
1,532,808	-				+2.0
1,532,808	-				+0.1
1,532,808	-				+0.6
1,532,808	-				+2.1
1,532,808	-				-0.4
1,532,808	-				-0.2
1,532,808	-				+0.4
1,532,808	-				-0.2
1,532,808	-				-1.2
1,532,808	-				+3.2
1,532,808	-				-0.2
1,532,808	-				+3.1
1,532,808	-				+1.1
1,532,808	-				-0.5
1,532,808	-				+0.5
1,532,811	+				-1.0
1,532,811	+				-0.7
1,532,811	+				-0.7
1,532,811	+				-0.4
1,532,811	+				-1.0
1,532,811	+				+0.3
1,532,811	+				-0.7
1,532,811	+				+1.2
1,532,811	+				-1.7
1,532,811	+				+1.5
1,532,811	+				-0.8
1,532,812	-				-0.5
1,532,812	-				-0.1
1,532,812	-				+1.7
1,532,812	-				-1.2
1,532,812	-				+0.3
1,532,812	-				-1.4
1,532,871	+				-0.1
1,532,871	+				-1.0
1,532,871	+				-1.2
1,532,872	-				-0.7
1,532,872	-				-0.2
1,532,872	-				-0.4
1,532,872	-				+1.5
1,532,872	-				+2.1
1,532,872	-				-0.3
1,532,930	+				-0.8
1,532,930	+				+0.2
1,532,930	+				-1.1
1,532,930	+				+2.1
1,532,930	+				-1.0
1,532,930	+				+0.2
1,532,930	+				-0.4
1,532,931	-				-1.1
1,532,931	-				+0.5
1,532,931	-				+0.1
1,532,931	-				-0.8
1,532,931	-				-0.5
1,532,931	-				-0.4
1,532,931	-				-0.1
1,532,931	-				+1.5
1,532,931	-				-0.8
1,532,957	+		LRK54_RS07150	0.14	-0.0
1,532,957	+		LRK54_RS07150	0.14	-0.2
1,532,957	+		LRK54_RS07150	0.14	+0.9
1,532,957	+		LRK54_RS07150	0.14	-1.0
1,532,957	+		LRK54_RS07150	0.14	+1.3
1,532,957	+		LRK54_RS07150	0.14	+0.0
1,532,957	+		LRK54_RS07150	0.14	-0.3
1,532,957	+		LRK54_RS07150	0.14	+0.2
1,532,957	+		LRK54_RS07150	0.14	-0.7
1,532,957	+		LRK54_RS07150	0.14	+1.4
1,532,957	+		LRK54_RS07150	0.14	+0.4
1,532,957	+		LRK54_RS07150	0.14	-1.0
1,532,957	+		LRK54_RS07150	0.14	+0.0
1,532,957	+		LRK54_RS07150	0.14	-0.3
1,532,957	+		LRK54_RS07150	0.14	+0.7
1,532,957	+		LRK54_RS07150	0.14	-0.9
1,532,957	+		LRK54_RS07150	0.14	-1.3
1,532,957	+		LRK54_RS07150	0.14	-0.8
1,532,957	+		LRK54_RS07150	0.14	-0.3
1,532,957	+		LRK54_RS07150	0.14	-0.6
1,532,957	+		LRK54_RS07150	0.14	-0.7
1,532,957	+		LRK54_RS07150	0.14	+0.9
1,532,957	+		LRK54_RS07150	0.14	-0.3
1,532,957	+		LRK54_RS07150	0.14	-0.4
1,532,957	+		LRK54_RS07150	0.14	+1.8
1,532,957	+		LRK54_RS07150	0.14	-2.2
1,532,957	+		LRK54_RS07150	0.14	+0.5
1,532,957	+		LRK54_RS07150	0.14	+0.7
1,532,957	+		LRK54_RS07150	0.14	+0.2
1,532,958	-		LRK54_RS07150	0.15	+0.1
1,532,958	-		LRK54_RS07150	0.15	-1.2
1,532,958	-		LRK54_RS07150	0.15	+0.0
1,532,958	-		LRK54_RS07150	0.15	+1.7
1,532,958	-		LRK54_RS07150	0.15	-0.7
1,532,958	-		LRK54_RS07150	0.15	+0.7
1,532,958	-		LRK54_RS07150	0.15	+0.2
1,532,958	-		LRK54_RS07150	0.15	-0.8
1,532,958	-		LRK54_RS07150	0.15	+1.6
1,532,958	-		LRK54_RS07150	0.15	+0.5
1,532,958	-		LRK54_RS07150	0.15	+0.2
1,532,958	-		LRK54_RS07150	0.15	-0.2
1,532,958	-		LRK54_RS07150	0.15	-0.0
1,532,958	-		LRK54_RS07150	0.15	-0.0
1,532,958	-		LRK54_RS07150	0.15	-0.8
1,532,958	-		LRK54_RS07150	0.15	+0.8
1,532,958	-		LRK54_RS07150	0.15	+0.8
1,532,958	-		LRK54_RS07150	0.15	-0.1
1,532,958	-		LRK54_RS07150	0.15	-0.3
1,532,958	-		LRK54_RS07150	0.15	-0.4
1,532,958	-		LRK54_RS07150	0.15	-0.4
1,532,958	-		LRK54_RS07150	0.15	-0.7
1,532,958	-		LRK54_RS07150	0.15	-0.0
1,532,958	-		LRK54_RS07150	0.15	+1.0
1,532,958	-		LRK54_RS07150	0.15	-0.1
1,532,958	-		LRK54_RS07150	0.15	+1.0
1,532,958	-		LRK54_RS07150	0.15	+2.3
1,532,958	-		LRK54_RS07150	0.15	+0.7
1,532,958	-		LRK54_RS07150	0.15	-2.9
1,532,958	-		LRK54_RS07150	0.15	+0.5
1,532,958	-		LRK54_RS07150	0.15	-0.5
1,532,958	-		LRK54_RS07150	0.15	-2.0
1,532,958	-		LRK54_RS07150	0.15	+1.0
1,532,958	-		LRK54_RS07150	0.15	-0.4
1,532,958	-		LRK54_RS07150	0.15	+1.3
1,533,009	+		LRK54_RS07150	0.32	-0.7
1,533,009	+		LRK54_RS07150	0.32	-0.4
1,533,009	+		LRK54_RS07150	0.32	-1.7
1,533,009	+		LRK54_RS07150	0.32	-1.1
1,533,009	+		LRK54_RS07150	0.32	+0.3
1,533,009	+		LRK54_RS07150	0.32	-0.3
1,533,009	+		LRK54_RS07150	0.32	-1.8
1,533,009	+		LRK54_RS07150	0.32	-0.9
1,533,009	+		LRK54_RS07150	0.32	+0.3
1,533,009	+		LRK54_RS07150	0.32	-0.6
1,533,009	+		LRK54_RS07150	0.32	-0.8
1,533,009	+		LRK54_RS07150	0.32	-1.8
1,533,009	+		LRK54_RS07150	0.32	-0.8
1,533,010	-		LRK54_RS07150	0.32	+1.2
1,533,010	-		LRK54_RS07150	0.32	-1.2
1,533,010	-		LRK54_RS07150	0.32	-0.4
1,533,010	-		LRK54_RS07150	0.32	+0.3
1,533,010	-		LRK54_RS07150	0.32	-0.5
1,533,010	-		LRK54_RS07150	0.32	-0.6
1,533,010	-		LRK54_RS07150	0.32	+0.3
1,533,010	-		LRK54_RS07150	0.32	+0.2
1,533,010	-		LRK54_RS07150	0.32	+0.1
1,533,010	-		LRK54_RS07150	0.32	+0.4
1,533,010	-		LRK54_RS07150	0.32	-0.5
1,533,173	+		LRK54_RS07150	0.88	-2.0
1,533,173	+		LRK54_RS07150	0.88	+0.3
1,533,173	+		LRK54_RS07150	0.88	-0.6
1,533,173	+		LRK54_RS07150	0.88	+0.9
1,533,173	+		LRK54_RS07150	0.88	-2.4
1,533,173	+		LRK54_RS07150	0.88	-1.3
1,533,173	+		LRK54_RS07150	0.88	-1.1
1,533,173	+		LRK54_RS07150	0.88	-1.3
1,533,173	+		LRK54_RS07150	0.88	-0.2
1,533,173	+		LRK54_RS07150	0.88	-2.2
1,533,173	+		LRK54_RS07150	0.88	-1.1
1,533,173	+		LRK54_RS07150	0.88	-1.4
1,533,173	+		LRK54_RS07150	0.88	-0.8
1,533,173	+		LRK54_RS07150	0.88	+0.4
1,533,173	+		LRK54_RS07150	0.88	+0.4
1,533,173	+		LRK54_RS07150	0.88	+1.4
1,533,173	+		LRK54_RS07150	0.88	-0.2
1,533,173	+		LRK54_RS07150	0.88	+1.0
1,533,174	-		LRK54_RS07150	0.88	-0.3
1,533,174	-		LRK54_RS07150	0.88	-0.5
1,533,174	-		LRK54_RS07150	0.88	+0.0
1,533,174	-		LRK54_RS07150	0.88	+0.2
1,533,174	-		LRK54_RS07150	0.88	-0.1
1,533,174	-		LRK54_RS07150	0.88	-1.1
1,533,174	-		LRK54_RS07150	0.88	+0.6
1,533,174	-		LRK54_RS07150	0.88	-1.1
1,533,174	-		LRK54_RS07150	0.88	-0.0
1,533,174	-		LRK54_RS07150	0.88	+1.2
1,533,174	-		LRK54_RS07150	0.88	+0.5
1,533,174	-		LRK54_RS07150	0.88	+0.9
1,533,174	-		LRK54_RS07150	0.88	-0.7
1,533,174	-		LRK54_RS07150	0.88	-1.3
1,533,175	+		LRK54_RS07150	0.88	-0.1
1,533,175	+		LRK54_RS07150	0.88	+0.0
1,533,175	+		LRK54_RS07150	0.88	-0.1
1,533,175	+		LRK54_RS07150	0.88	-1.5
1,533,175	+		LRK54_RS07150	0.88	-0.1
1,533,175	+		LRK54_RS07150	0.88	-0.3
1,533,175	+		LRK54_RS07150	0.88	+1.7
1,533,175	+		LRK54_RS07150	0.88	+0.0
1,533,175	+		LRK54_RS07150	0.88	+2.2
1,533,175	+		LRK54_RS07150	0.88	-2.6
1,533,176	-		LRK54_RS07150	0.89	+0.1
1,533,176	-		LRK54_RS07150	0.89	-0.0
1,533,176	-		LRK54_RS07150	0.89	-0.3
1,533,176	-		LRK54_RS07150	0.89	+0.2
1,533,176	-		LRK54_RS07150	0.89	+0.5
1,533,176	-		LRK54_RS07150	0.89	+0.8
1,533,176	-		LRK54_RS07150	0.89	+0.0
1,533,176	-		LRK54_RS07150	0.89	-0.4
1,533,176	-		LRK54_RS07150	0.89	+0.9
1,533,176	-		LRK54_RS07150	0.89	+0.2
1,533,176	-		LRK54_RS07150	0.89	-1.8
1,533,176	-		LRK54_RS07150	0.89	+0.0
1,533,176	-		LRK54_RS07150	0.89	-0.6
1,533,232	+				-1.9
1,533,233	-				-0.2
1,533,268	+				+0.7
1,533,268	+				+0.2
1,533,268	+				-0.8
1,533,268	+				-0.3
1,533,268	+				-0.5
1,533,268	+				-2.0
1,533,268	+				-1.1
1,533,268	+				-0.3
1,533,268	+				-1.4
1,533,268	+				+1.5
1,533,268	+				-0.8
1,533,268	+				+0.3
1,533,268	+				+0.5
1,533,268	+				-1.6
1,533,268	+				+0.8
1,533,268	+				-1.0
1,533,268	+				+0.0
1,533,268	+				-3.3
1,533,268	+				-0.6
1,533,268	+				-0.7
1,533,268	+				-0.9
1,533,268	+				-0.1
1,533,268	+				+0.5
1,533,268	+				+0.2
1,533,268	+				+0.9
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