Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_01010 and AO356_01015 are separated by 249 nucleotides AO356_01015 and AO356_01020 overlap by 4 nucleotides AO356_01020 and AO356_01025 are separated by 155 nucleotides
AO356_01010: AO356_01010 - glutamine--tRNA ligase, at 226,780 to 228,480
_01010
AO356_01015: AO356_01015 - peptidylprolyl isomerase, at 228,730 to 229,233
_01015
AO356_01020: AO356_01020 - UDP-2,3-diacylglucosamine hydrolase, at 229,230 to 229,979
_01020
AO356_01025: AO356_01025 - multidrug resistance protein B, at 230,135 to 231,664
_01025
Position (kb) 228
229
230 Strain fitness (log2 ratio) -1
0
1 at 228.560 kb on - strand at 228.560 kb on - strand at 228.643 kb on - strand at 228.823 kb on + strand, within AO356_01015 at 228.823 kb on + strand, within AO356_01015 at 228.979 kb on + strand, within AO356_01015 at 229.234 kb on + strand at 229.977 kb on + strand at 229.977 kb on + strand at 229.977 kb on + strand at 229.977 kb on + strand at 229.977 kb on + strand at 229.977 kb on + strand at 229.978 kb on - strand at 229.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 228,560 - +1.3 228,560 - -1.1 228,643 - -0.6 228,823 + AO356_01015 0.18 -1.7 228,823 + AO356_01015 0.18 -1.0 228,979 + AO356_01015 0.49 +0.0 229,234 + +0.2 229,977 + -0.9 229,977 + +0.0 229,977 + -0.2 229,977 + -0.5 229,977 + +0.7 229,977 + -0.4 229,978 - -1.4 229,978 - -0.7
Or see this region's nucleotide sequence