Experiment: m.b. Doxycycline hyclate 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0859 and Echvi_0860 are separated by 41 nucleotides Echvi_0860 and Echvi_0861 are separated by 27 nucleotides Echvi_0861 and Echvi_0862 are separated by 150 nucleotides
Echvi_0859: Echvi_0859 - Predicted molecular chaperone distantly related to HSP70-fold metalloproteases, at 981,093 to 982,169
_0859
Echvi_0860: Echvi_0860 - hypothetical protein, at 982,211 to 982,309
_0860
Echvi_0861: Echvi_0861 - hypothetical protein, at 982,337 to 982,486
_0861
Echvi_0862: Echvi_0862 - Glutamate dehydrogenase/leucine dehydrogenase, at 982,637 to 983,863
_0862
Position (kb) 982
983 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 981.373 kb on + strand, within Echvi_0859 at 981.373 kb on + strand, within Echvi_0859 at 981.373 kb on + strand, within Echvi_0859 at 981.374 kb on - strand, within Echvi_0859 at 981.374 kb on - strand, within Echvi_0859 at 981.374 kb on - strand, within Echvi_0859 at 981.390 kb on - strand, within Echvi_0859 at 981.394 kb on + strand, within Echvi_0859 at 981.394 kb on + strand, within Echvi_0859 at 981.395 kb on - strand, within Echvi_0859 at 981.395 kb on - strand, within Echvi_0859 at 981.395 kb on - strand, within Echvi_0859 at 981.395 kb on - strand, within Echvi_0859 at 981.505 kb on + strand, within Echvi_0859 at 981.505 kb on + strand, within Echvi_0859 at 981.506 kb on - strand, within Echvi_0859 at 981.562 kb on - strand, within Echvi_0859 at 981.562 kb on - strand, within Echvi_0859 at 981.562 kb on - strand, within Echvi_0859 at 981.575 kb on + strand, within Echvi_0859 at 981.576 kb on - strand, within Echvi_0859 at 981.610 kb on - strand, within Echvi_0859 at 981.686 kb on - strand, within Echvi_0859 at 981.690 kb on + strand, within Echvi_0859 at 981.690 kb on + strand, within Echvi_0859 at 981.691 kb on - strand, within Echvi_0859 at 981.716 kb on + strand, within Echvi_0859 at 981.727 kb on + strand, within Echvi_0859 at 981.768 kb on + strand, within Echvi_0859 at 981.768 kb on + strand, within Echvi_0859 at 981.768 kb on + strand, within Echvi_0859 at 981.769 kb on - strand, within Echvi_0859 at 981.832 kb on + strand, within Echvi_0859 at 981.885 kb on + strand, within Echvi_0859 at 981.885 kb on + strand, within Echvi_0859 at 981.908 kb on - strand, within Echvi_0859 at 981.935 kb on + strand, within Echvi_0859 at 981.966 kb on + strand, within Echvi_0859 at 982.094 kb on + strand at 982.094 kb on + strand at 982.094 kb on + strand at 982.094 kb on + strand at 982.098 kb on - strand at 982.106 kb on - strand at 982.106 kb on - strand at 982.109 kb on + strand at 982.110 kb on - strand at 982.110 kb on - strand at 982.142 kb on + strand at 982.142 kb on + strand at 982.158 kb on + strand at 982.158 kb on + strand at 982.158 kb on + strand at 982.159 kb on - strand at 982.159 kb on - strand at 982.167 kb on + strand at 982.175 kb on + strand at 982.176 kb on - strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.178 kb on + strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.179 kb on - strand at 982.180 kb on + strand at 982.181 kb on - strand at 982.187 kb on - strand at 982.212 kb on + strand at 982.213 kb on - strand at 982.277 kb on + strand, within Echvi_0860 at 982.277 kb on + strand, within Echvi_0860 at 982.277 kb on + strand, within Echvi_0860 at 982.286 kb on + strand, within Echvi_0860 at 982.286 kb on + strand, within Echvi_0860 at 982.286 kb on + strand, within Echvi_0860 at 982.286 kb on + strand, within Echvi_0860 at 982.287 kb on - strand, within Echvi_0860 at 982.287 kb on - strand, within Echvi_0860 at 982.287 kb on - strand, within Echvi_0860 at 982.287 kb on - strand, within Echvi_0860 at 982.288 kb on + strand, within Echvi_0860 at 982.288 kb on + strand, within Echvi_0860 at 982.288 kb on + strand, within Echvi_0860 at 982.288 kb on + strand, within Echvi_0860 at 982.289 kb on - strand, within Echvi_0860 at 982.289 kb on - strand, within Echvi_0860 at 982.305 kb on - strand at 982.309 kb on + strand at 982.309 kb on + strand at 982.309 kb on + strand at 982.351 kb on + strand at 982.352 kb on - strand, within Echvi_0861 at 982.353 kb on + strand, within Echvi_0861 at 982.354 kb on - strand, within Echvi_0861 at 982.361 kb on + strand, within Echvi_0861 at 982.361 kb on + strand, within Echvi_0861 at 982.361 kb on + strand, within Echvi_0861 at 982.376 kb on - strand, within Echvi_0861 at 982.376 kb on - strand, within Echvi_0861 at 982.420 kb on + strand, within Echvi_0861 at 982.421 kb on - strand, within Echvi_0861 at 982.430 kb on - strand, within Echvi_0861 at 982.475 kb on + strand at 982.476 kb on - strand at 982.519 kb on + strand at 982.520 kb on - strand at 982.520 kb on - strand at 982.531 kb on + strand at 982.632 kb on - strand at 982.632 kb on - strand at 982.637 kb on - strand at 982.637 kb on - strand at 982.637 kb on - strand at 982.777 kb on + strand, within Echvi_0862 at 982.777 kb on + strand, within Echvi_0862 at 982.864 kb on + strand, within Echvi_0862 at 982.944 kb on + strand, within Echvi_0862 at 982.956 kb on - strand, within Echvi_0862 at 982.956 kb on - strand, within Echvi_0862 at 982.956 kb on - strand, within Echvi_0862 at 982.958 kb on + strand, within Echvi_0862 at 982.958 kb on + strand, within Echvi_0862 at 982.963 kb on + strand, within Echvi_0862 at 982.963 kb on + strand, within Echvi_0862 at 982.963 kb on + strand, within Echvi_0862 at 982.963 kb on + strand, within Echvi_0862 at 983.021 kb on + strand, within Echvi_0862 at 983.022 kb on - strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.052 kb on + strand, within Echvi_0862 at 983.053 kb on - strand, within Echvi_0862 at 983.128 kb on - strand, within Echvi_0862 at 983.144 kb on + strand, within Echvi_0862 at 983.145 kb on - strand, within Echvi_0862 at 983.145 kb on - strand, within Echvi_0862 at 983.169 kb on - strand, within Echvi_0862 at 983.170 kb on + strand, within Echvi_0862 at 983.170 kb on + strand, within Echvi_0862 at 983.182 kb on + strand, within Echvi_0862 at 983.214 kb on + strand, within Echvi_0862 at 983.215 kb on - strand, within Echvi_0862 at 983.225 kb on + strand, within Echvi_0862 at 983.226 kb on - strand, within Echvi_0862 at 983.226 kb on - strand, within Echvi_0862 at 983.247 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.286 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.361 kb on + strand, within Echvi_0862 at 983.362 kb on - strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.385 kb on + strand, within Echvi_0862 at 983.386 kb on - strand, within Echvi_0862 at 983.386 kb on - strand, within Echvi_0862 at 983.446 kb on - strand, within Echvi_0862 at 983.485 kb on - strand, within Echvi_0862
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Doxycycline hyclate 0.032 mg/ml remove 981,373 + Echvi_0859 0.26 -1.5 981,373 + Echvi_0859 0.26 +1.0 981,373 + Echvi_0859 0.26 +2.3 981,374 - Echvi_0859 0.26 -1.0 981,374 - Echvi_0859 0.26 +0.8 981,374 - Echvi_0859 0.26 +0.2 981,390 - Echvi_0859 0.28 +0.9 981,394 + Echvi_0859 0.28 -0.8 981,394 + Echvi_0859 0.28 +0.2 981,395 - Echvi_0859 0.28 -1.0 981,395 - Echvi_0859 0.28 -0.7 981,395 - Echvi_0859 0.28 -0.2 981,395 - Echvi_0859 0.28 -1.7 981,505 + Echvi_0859 0.38 -0.3 981,505 + Echvi_0859 0.38 +0.2 981,506 - Echvi_0859 0.38 -2.5 981,562 - Echvi_0859 0.44 -0.6 981,562 - Echvi_0859 0.44 -1.2 981,562 - Echvi_0859 0.44 +1.3 981,575 + Echvi_0859 0.45 +0.8 981,576 - Echvi_0859 0.45 +2.0 981,610 - Echvi_0859 0.48 +0.5 981,686 - Echvi_0859 0.55 -1.2 981,690 + Echvi_0859 0.55 +0.8 981,690 + Echvi_0859 0.55 -1.0 981,691 - Echvi_0859 0.56 +1.4 981,716 + Echvi_0859 0.58 +0.5 981,727 + Echvi_0859 0.59 +0.1 981,768 + Echvi_0859 0.63 +0.0 981,768 + Echvi_0859 0.63 +1.5 981,768 + Echvi_0859 0.63 -0.4 981,769 - Echvi_0859 0.63 -3.2 981,832 + Echvi_0859 0.69 +1.0 981,885 + Echvi_0859 0.74 -1.0 981,885 + Echvi_0859 0.74 +1.2 981,908 - Echvi_0859 0.76 +1.1 981,935 + Echvi_0859 0.78 +2.2 981,966 + Echvi_0859 0.81 +1.7 982,094 + +1.1 982,094 + +1.5 982,094 + +1.1 982,094 + +1.8 982,098 - +0.6 982,106 - +0.4 982,106 - +2.1 982,109 + +2.0 982,110 - -0.5 982,110 - -0.8 982,142 + +2.3 982,142 + +0.9 982,158 + +1.9 982,158 + +2.5 982,158 + +1.7 982,159 - -0.4 982,159 - -0.9 982,167 + +3.0 982,175 + +2.3 982,176 - -1.4 982,178 + +2.1 982,178 + +3.1 982,178 + +1.6 982,178 + +2.3 982,178 + +2.4 982,178 + +2.1 982,178 + +2.8 982,178 + +2.3 982,178 + +1.6 982,179 - -0.4 982,179 - -1.6 982,179 - -0.4 982,179 - -1.8 982,179 - -0.0 982,179 - -0.9 982,179 - +0.2 982,180 + +2.0 982,181 - +1.2 982,187 - -0.6 982,212 + +2.2 982,213 - -2.1 982,277 + Echvi_0860 0.67 +2.2 982,277 + Echvi_0860 0.67 +2.2 982,277 + Echvi_0860 0.67 +1.8 982,286 + Echvi_0860 0.76 +1.9 982,286 + Echvi_0860 0.76 +1.7 982,286 + Echvi_0860 0.76 +2.0 982,286 + Echvi_0860 0.76 +2.3 982,287 - Echvi_0860 0.77 +0.9 982,287 - Echvi_0860 0.77 -0.8 982,287 - Echvi_0860 0.77 +0.4 982,287 - Echvi_0860 0.77 -0.1 982,288 + Echvi_0860 0.78 +1.4 982,288 + Echvi_0860 0.78 +2.2 982,288 + Echvi_0860 0.78 +2.2 982,288 + Echvi_0860 0.78 +2.0 982,289 - Echvi_0860 0.79 +0.6 982,289 - Echvi_0860 0.79 +1.8 982,305 - -0.0 982,309 + +1.7 982,309 + +0.6 982,309 + +1.8 982,351 + +2.2 982,352 - Echvi_0861 0.10 +0.0 982,353 + Echvi_0861 0.11 +2.1 982,354 - Echvi_0861 0.11 -0.2 982,361 + Echvi_0861 0.16 +2.4 982,361 + Echvi_0861 0.16 +1.6 982,361 + Echvi_0861 0.16 +1.8 982,376 - Echvi_0861 0.26 +0.7 982,376 - Echvi_0861 0.26 +1.5 982,420 + Echvi_0861 0.55 +1.6 982,421 - Echvi_0861 0.56 -0.4 982,430 - Echvi_0861 0.62 -0.7 982,475 + +1.3 982,476 - -0.2 982,519 + +2.4 982,520 - -0.2 982,520 - +0.9 982,531 + +2.3 982,632 - -1.6 982,632 - -2.4 982,637 - -0.1 982,637 - +0.3 982,637 - -0.5 982,777 + Echvi_0862 0.11 +1.5 982,777 + Echvi_0862 0.11 +3.1 982,864 + Echvi_0862 0.19 +3.0 982,944 + Echvi_0862 0.25 +3.1 982,956 - Echvi_0862 0.26 -1.3 982,956 - Echvi_0862 0.26 +0.4 982,956 - Echvi_0862 0.26 -1.0 982,958 + Echvi_0862 0.26 +2.3 982,958 + Echvi_0862 0.26 +2.8 982,963 + Echvi_0862 0.27 +1.8 982,963 + Echvi_0862 0.27 +2.5 982,963 + Echvi_0862 0.27 +2.8 982,963 + Echvi_0862 0.27 +2.3 983,021 + Echvi_0862 0.31 +3.3 983,022 - Echvi_0862 0.31 -0.4 983,052 + Echvi_0862 0.34 +2.4 983,052 + Echvi_0862 0.34 +2.2 983,052 + Echvi_0862 0.34 +3.7 983,052 + Echvi_0862 0.34 +2.1 983,052 + Echvi_0862 0.34 +1.9 983,053 - Echvi_0862 0.34 -1.9 983,128 - Echvi_0862 0.40 -0.1 983,144 + Echvi_0862 0.41 +3.1 983,145 - Echvi_0862 0.41 +1.2 983,145 - Echvi_0862 0.41 +1.2 983,169 - Echvi_0862 0.43 +1.3 983,170 + Echvi_0862 0.43 +2.5 983,170 + Echvi_0862 0.43 +2.9 983,182 + Echvi_0862 0.44 -1.0 983,214 + Echvi_0862 0.47 +3.3 983,215 - Echvi_0862 0.47 +0.8 983,225 + Echvi_0862 0.48 +2.3 983,226 - Echvi_0862 0.48 -1.8 983,226 - Echvi_0862 0.48 -2.6 983,247 + Echvi_0862 0.50 +3.2 983,286 + Echvi_0862 0.53 +0.3 983,286 + Echvi_0862 0.53 +2.7 983,286 + Echvi_0862 0.53 +3.2 983,361 + Echvi_0862 0.59 +2.7 983,361 + Echvi_0862 0.59 +1.9 983,361 + Echvi_0862 0.59 +3.3 983,362 - Echvi_0862 0.59 +0.2 983,385 + Echvi_0862 0.61 +2.5 983,385 + Echvi_0862 0.61 +3.4 983,385 + Echvi_0862 0.61 +2.8 983,386 - Echvi_0862 0.61 +0.9 983,386 - Echvi_0862 0.61 -1.2 983,446 - Echvi_0862 0.66 -0.2 983,485 - Echvi_0862 0.69 +1.6
Or see this region's nucleotide sequence