Experiment: Ethanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03915 and AO356_03920 are separated by 9 nucleotides AO356_03920 and AO356_03925 are separated by 70 nucleotides AO356_03925 and AO356_03930 are separated by 49 nucleotides
AO356_03915: AO356_03915 - flagellar biosynthesis protein FlgI, at 871,840 to 872,946
_03915
AO356_03920: AO356_03920 - flagellar basal body L-ring protein, at 872,956 to 873,651
_03920
AO356_03925: AO356_03925 - flagellar basal-body rod protein FlgG, at 873,722 to 874,507
_03925
AO356_03930: AO356_03930 - flagellar biosynthesis protein FlgF, at 874,557 to 875,294
_03930
Position (kb) 873
874
875 Strain fitness (log2 ratio) -1
0
1
2 at 872.751 kb on + strand, within AO356_03915 at 872.751 kb on + strand, within AO356_03915 at 872.751 kb on + strand, within AO356_03915 at 872.923 kb on + strand at 872.923 kb on + strand at 872.924 kb on - strand at 872.924 kb on - strand at 872.924 kb on - strand at 872.937 kb on + strand at 872.937 kb on + strand at 872.937 kb on + strand at 872.937 kb on + strand at 872.938 kb on - strand at 872.957 kb on + strand at 872.958 kb on - strand at 872.958 kb on - strand at 872.958 kb on - strand at 873.038 kb on + strand, within AO356_03920 at 873.038 kb on + strand, within AO356_03920 at 873.039 kb on - strand, within AO356_03920 at 873.039 kb on - strand, within AO356_03920 at 873.039 kb on - strand, within AO356_03920 at 873.039 kb on - strand, within AO356_03920 at 873.405 kb on + strand, within AO356_03920 at 873.405 kb on + strand, within AO356_03920 at 873.406 kb on - strand, within AO356_03920 at 873.406 kb on - strand, within AO356_03920 at 873.476 kb on + strand, within AO356_03920 at 873.476 kb on + strand, within AO356_03920 at 873.477 kb on - strand, within AO356_03920 at 873.477 kb on - strand, within AO356_03920 at 873.503 kb on + strand, within AO356_03920 at 873.503 kb on + strand, within AO356_03920 at 873.541 kb on - strand, within AO356_03920 at 873.560 kb on + strand, within AO356_03920 at 873.560 kb on + strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.561 kb on - strand, within AO356_03920 at 873.563 kb on + strand, within AO356_03920 at 873.564 kb on - strand, within AO356_03920 at 873.637 kb on + strand at 873.637 kb on + strand at 873.638 kb on - strand at 873.657 kb on + strand at 873.657 kb on + strand at 873.657 kb on + strand at 873.657 kb on + strand at 873.657 kb on + strand at 873.657 kb on + strand at 873.658 kb on - strand at 873.697 kb on + strand at 873.697 kb on + strand at 873.698 kb on - strand at 873.698 kb on - strand at 873.698 kb on - strand at 873.698 kb on - strand at 873.701 kb on + strand at 873.701 kb on + strand at 873.701 kb on + strand at 873.701 kb on + strand at 873.702 kb on - strand at 873.702 kb on - strand at 873.702 kb on - strand at 873.723 kb on + strand at 873.724 kb on - strand at 874.153 kb on + strand, within AO356_03925 at 874.153 kb on + strand, within AO356_03925 at 874.154 kb on - strand, within AO356_03925 at 874.167 kb on + strand, within AO356_03925 at 874.168 kb on - strand, within AO356_03925 at 874.168 kb on - strand, within AO356_03925 at 874.292 kb on + strand, within AO356_03925 at 874.292 kb on + strand, within AO356_03925 at 874.293 kb on - strand, within AO356_03925 at 874.293 kb on - strand, within AO356_03925 at 874.364 kb on + strand, within AO356_03925 at 874.364 kb on + strand, within AO356_03925 at 874.371 kb on + strand, within AO356_03925 at 874.372 kb on - strand, within AO356_03925 at 874.372 kb on - strand, within AO356_03925 at 874.522 kb on - strand at 874.551 kb on + strand at 874.551 kb on + strand at 874.551 kb on + strand at 874.551 kb on + strand at 874.551 kb on + strand at 874.552 kb on - strand at 874.558 kb on + strand at 874.559 kb on - strand at 874.559 kb on - strand at 874.959 kb on + strand, within AO356_03930 at 874.999 kb on + strand, within AO356_03930 at 874.999 kb on + strand, within AO356_03930 at 875.000 kb on - strand, within AO356_03930 at 875.000 kb on - strand, within AO356_03930 at 875.000 kb on - strand, within AO356_03930 at 875.158 kb on - strand, within AO356_03930 at 875.158 kb on - strand, within AO356_03930 at 875.278 kb on + strand at 875.278 kb on + strand at 875.278 kb on + strand at 875.278 kb on + strand at 875.278 kb on + strand at 875.278 kb on + strand at 875.278 kb on + strand at 875.279 kb on - strand at 875.284 kb on + strand at 875.284 kb on + strand at 875.284 kb on + strand at 875.284 kb on + strand at 875.284 kb on + strand at 875.285 kb on - strand at 875.285 kb on - strand at 875.285 kb on - strand at 875.285 kb on - strand at 875.285 kb on - strand at 875.285 kb on - strand at 875.394 kb on + strand at 875.394 kb on + strand at 875.435 kb on + strand at 875.435 kb on + strand at 875.436 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanol (C) remove 872,751 + AO356_03915 0.82 +1.7 872,751 + AO356_03915 0.82 +0.8 872,751 + AO356_03915 0.82 +0.9 872,923 + +0.9 872,923 + +0.7 872,924 - +0.6 872,924 - +0.8 872,924 - +0.7 872,937 + +1.0 872,937 + +0.0 872,937 + +0.8 872,937 + +0.8 872,938 - +1.4 872,957 + +0.9 872,958 - +1.3 872,958 - +0.6 872,958 - -0.0 873,038 + AO356_03920 0.12 +0.2 873,038 + AO356_03920 0.12 -0.8 873,039 - AO356_03920 0.12 +1.1 873,039 - AO356_03920 0.12 +0.1 873,039 - AO356_03920 0.12 -0.4 873,039 - AO356_03920 0.12 +1.5 873,405 + AO356_03920 0.65 +0.6 873,405 + AO356_03920 0.65 -0.4 873,406 - AO356_03920 0.65 +0.7 873,406 - AO356_03920 0.65 +0.5 873,476 + AO356_03920 0.75 -0.2 873,476 + AO356_03920 0.75 +1.2 873,477 - AO356_03920 0.75 -0.7 873,477 - AO356_03920 0.75 -0.1 873,503 + AO356_03920 0.79 +1.8 873,503 + AO356_03920 0.79 +0.5 873,541 - AO356_03920 0.84 +0.4 873,560 + AO356_03920 0.87 +0.8 873,560 + AO356_03920 0.87 +0.3 873,561 - AO356_03920 0.87 +0.7 873,561 - AO356_03920 0.87 +1.2 873,561 - AO356_03920 0.87 +0.5 873,561 - AO356_03920 0.87 +0.6 873,561 - AO356_03920 0.87 +0.6 873,561 - AO356_03920 0.87 +0.5 873,561 - AO356_03920 0.87 +0.7 873,563 + AO356_03920 0.87 +1.1 873,564 - AO356_03920 0.87 +0.8 873,637 + +1.5 873,637 + +0.5 873,638 - +1.0 873,657 + +0.9 873,657 + +1.3 873,657 + +0.3 873,657 + +1.0 873,657 + +0.8 873,657 + +0.9 873,658 - +0.2 873,697 + +0.4 873,697 + +0.7 873,698 - -1.6 873,698 - -1.4 873,698 - +0.6 873,698 - -0.9 873,701 + +0.8 873,701 + +0.7 873,701 + +0.1 873,701 + +1.0 873,702 - -0.6 873,702 - -0.0 873,702 - +0.6 873,723 + +0.5 873,724 - -0.3 874,153 + AO356_03925 0.55 -0.2 874,153 + AO356_03925 0.55 +1.5 874,154 - AO356_03925 0.55 +0.1 874,167 + AO356_03925 0.57 +0.3 874,168 - AO356_03925 0.57 +0.1 874,168 - AO356_03925 0.57 +0.5 874,292 + AO356_03925 0.73 +0.5 874,292 + AO356_03925 0.73 +0.8 874,293 - AO356_03925 0.73 +0.9 874,293 - AO356_03925 0.73 +0.6 874,364 + AO356_03925 0.82 +0.9 874,364 + AO356_03925 0.82 +0.8 874,371 + AO356_03925 0.83 +1.4 874,372 - AO356_03925 0.83 +1.0 874,372 - AO356_03925 0.83 +1.1 874,522 - -0.3 874,551 + +1.3 874,551 + +0.8 874,551 + +0.7 874,551 + +0.4 874,551 + +0.7 874,552 - -0.8 874,558 + +0.7 874,559 - +0.5 874,559 - -0.7 874,959 + AO356_03930 0.54 +1.5 874,999 + AO356_03930 0.60 -0.6 874,999 + AO356_03930 0.60 +0.1 875,000 - AO356_03930 0.60 -0.3 875,000 - AO356_03930 0.60 +0.2 875,000 - AO356_03930 0.60 +0.7 875,158 - AO356_03930 0.81 +0.6 875,158 - AO356_03930 0.81 +0.0 875,278 + -0.2 875,278 + +0.8 875,278 + +0.7 875,278 + +1.3 875,278 + +0.4 875,278 + +0.8 875,278 + +1.1 875,279 - +0.4 875,284 + +0.6 875,284 + +0.5 875,284 + +0.2 875,284 + +0.6 875,284 + +0.4 875,285 - +0.1 875,285 - +1.0 875,285 - +0.9 875,285 - -0.1 875,285 - +1.0 875,285 - +0.7 875,394 + +0.3 875,394 + +0.1 875,435 + +1.0 875,435 + -0.1 875,436 - +0.8
Or see this region's nucleotide sequence