Strain Fitness in Sinorhizobium meliloti 1021 around SMa1664
Experiment: Fusidic 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
930,244 | + | SMa1662 | 0.75 | -0.1 | |
930,245 | - | SMa1662 | 0.75 | -0.2 | |
930,245 | - | SMa1662 | 0.75 | +0.2 | |
930,276 | + | SMa1662 | 0.76 | +0.4 | |
930,433 | + | SMa1662 | 0.81 | +0.6 | |
930,465 | + | SMa1662 | 0.82 | -0.1 | |
930,466 | - | SMa1662 | 0.82 | +0.0 | |
930,476 | + | SMa1662 | 0.82 | +0.7 | |
930,551 | + | SMa1662 | 0.85 | -0.4 | |
930,552 | - | SMa1662 | 0.85 | -0.7 | |
930,566 | - | SMa1662 | 0.85 | +0.8 | |
930,566 | - | SMa1662 | 0.85 | -0.1 | |
930,593 | + | SMa1662 | 0.86 | +1.2 | |
930,758 | + | -0.1 | |||
930,758 | + | -0.4 | |||
930,791 | + | -0.6 | |||
930,791 | + | -0.1 | |||
930,791 | + | +0.0 | |||
930,791 | + | -0.3 | |||
930,791 | + | +0.2 | |||
930,791 | + | -0.0 | |||
930,792 | - | +0.1 | |||
930,792 | - | -0.6 | |||
930,792 | - | +0.8 | |||
930,792 | - | +0.7 | |||
930,875 | + | -1.2 | |||
930,876 | - | -0.5 | |||
931,240 | - | SMa1664 | 0.19 | +0.0 | |
931,371 | - | SMa1664 | 0.30 | +0.9 | |
931,454 | - | SMa1664 | 0.37 | +0.3 | |
931,645 | + | SMa1664 | 0.53 | -1.1 | |
931,694 | - | SMa1664 | 0.57 | -1.6 | |
931,907 | - | SMa1664 | 0.76 | -0.1 | |
931,907 | - | SMa1664 | 0.76 | -0.0 | |
932,058 | + | SMa1664 | 0.89 | -0.3 | |
932,058 | + | SMa1664 | 0.89 | -0.1 | |
932,058 | + | SMa1664 | 0.89 | -0.2 | |
932,333 | + | +0.2 | |||
932,334 | - | -0.3 | |||
932,334 | - | -0.7 | |||
932,334 | - | -0.3 | |||
932,370 | - | +0.9 | |||
932,382 | + | -0.3 | |||
932,383 | - | +0.1 | |||
932,383 | - | +1.9 | |||
932,747 | + | SMa1666 | 0.46 | +0.9 | |
932,811 | + | SMa1666 | 0.59 | -0.8 | |
932,811 | + | SMa1666 | 0.59 | -0.4 | |
932,812 | - | SMa1666 | 0.60 | +0.3 | |
932,812 | - | SMa1666 | 0.60 | -2.2 | |
932,988 | + | +0.3 | |||
932,989 | - | +0.4 | |||
933,102 | + | -0.5 | |||
933,103 | - | -0.6 | |||
933,154 | + | +0.1 | |||
933,154 | + | +0.2 | |||
933,155 | - | -0.2 |
Or see this region's nucleotide sequence