Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2057

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
2,258,844	+				+0.1
2,258,844	+				-3.3
2,258,845	-				-1.8
2,258,910	-				-1.0
2,259,645	+				-0.2
2,259,646	-				-1.7
2,259,655	+				-0.9
2,259,768	+				-1.5
2,259,768	+				-0.8
2,259,768	+				-2.5
2,259,769	-				+0.4
2,259,772	+				-1.5
2,259,781	-				-0.5
2,259,865	+				+1.8
2,259,865	+				-2.1
2,259,865	+				-1.9
2,259,866	-				+2.3
2,259,866	-				+0.0
2,259,866	-				-1.5
2,259,931	-		PfGW456L13_2057	0.15	-0.3
2,259,942	+		PfGW456L13_2057	0.16	-2.1
2,259,942	+		PfGW456L13_2057	0.16	-0.6
2,259,943	-		PfGW456L13_2057	0.16	+1.2
2,259,996	+		PfGW456L13_2057	0.22	+2.2
2,259,996	+		PfGW456L13_2057	0.22	+0.3
2,259,997	-		PfGW456L13_2057	0.22	-0.8
2,259,997	-		PfGW456L13_2057	0.22	+1.4
2,259,997	-		PfGW456L13_2057	0.22	-0.7
2,260,032	+		PfGW456L13_2057	0.25	-0.1
2,260,032	+		PfGW456L13_2057	0.25	-2.6
2,260,032	+		PfGW456L13_2057	0.25	-1.5
2,260,032	+		PfGW456L13_2057	0.25	-3.1
2,260,033	-		PfGW456L13_2057	0.25	-2.0
2,260,033	-		PfGW456L13_2057	0.25	+1.4
2,260,033	-		PfGW456L13_2057	0.25	+1.4
2,260,033	-		PfGW456L13_2057	0.25	-1.7
2,260,033	-		PfGW456L13_2057	0.25	+1.2
2,260,125	+		PfGW456L13_2057	0.34	-2.4
2,260,126	-		PfGW456L13_2057	0.35	-2.7
2,260,126	-		PfGW456L13_2057	0.35	+1.8
2,260,185	+		PfGW456L13_2057	0.40	+0.5
2,260,378	-		PfGW456L13_2057	0.60	+1.8
2,260,413	+		PfGW456L13_2057	0.63	+0.8
2,260,413	+		PfGW456L13_2057	0.63	-0.6
2,260,413	+		PfGW456L13_2057	0.63	-2.0
2,260,413	+		PfGW456L13_2057	0.63	+0.6
2,260,413	+		PfGW456L13_2057	0.63	+0.3
2,260,414	-		PfGW456L13_2057	0.63	-2.3
2,260,414	-		PfGW456L13_2057	0.63	-4.0
2,260,414	-		PfGW456L13_2057	0.63	+1.5
2,260,414	-		PfGW456L13_2057	0.63	-0.6
2,260,414	-		PfGW456L13_2057	0.63	+0.1
2,260,449	+		PfGW456L13_2057	0.67	-0.1
2,260,449	+		PfGW456L13_2057	0.67	-1.4
2,260,449	+		PfGW456L13_2057	0.67	+0.7
2,260,449	+		PfGW456L13_2057	0.67	+0.8
2,260,450	-		PfGW456L13_2057	0.67	-0.8
2,260,450	-		PfGW456L13_2057	0.67	+0.9
2,260,450	-		PfGW456L13_2057	0.67	+0.8
2,260,450	-		PfGW456L13_2057	0.67	-1.0
2,260,450	-		PfGW456L13_2057	0.67	+1.4
2,260,506	+		PfGW456L13_2057	0.72	-1.6
2,260,506	+		PfGW456L13_2057	0.72	-0.1
2,260,599	+		PfGW456L13_2057	0.82	-1.3
2,260,599	+		PfGW456L13_2057	0.82	+0.6
2,260,599	+		PfGW456L13_2057	0.82	+1.2
2,260,600	-		PfGW456L13_2057	0.82	-3.3
2,260,600	-		PfGW456L13_2057	0.82	+3.1
2,260,600	-		PfGW456L13_2057	0.82	-2.0
2,260,600	-		PfGW456L13_2057	0.82	+1.2
2,260,600	-		PfGW456L13_2057	0.82	-1.8
2,260,650	+		PfGW456L13_2057	0.87	-0.8
2,260,650	+		PfGW456L13_2057	0.87	+2.5
2,260,650	+		PfGW456L13_2057	0.87	-0.8
2,260,650	+		PfGW456L13_2057	0.87	+0.1
2,260,651	-		PfGW456L13_2057	0.87	+0.4
2,260,651	-		PfGW456L13_2057	0.87	+1.4
2,260,651	-		PfGW456L13_2057	0.87	-1.0
2,260,667	+		PfGW456L13_2057	0.88	-2.2
2,260,667	+		PfGW456L13_2057	0.88	-1.0
2,260,668	-		PfGW456L13_2057	0.88	-1.7
2,260,697	+				+1.0
2,260,707	+				+0.3
2,260,708	-				-3.1
2,260,708	-				+0.6
2,260,708	-				-2.3
2,260,884	+				+1.3
2,260,884	+				-2.6
2,260,884	+				-3.3
2,260,885	-				+2.0
2,260,940	+				-0.3
2,260,941	-				+0.9
2,260,971	-				+2.0
2,260,982	-				-1.4
2,261,015	+				-0.0
2,261,015	+				-0.6
2,261,015	+				+0.5
2,261,015	+				-1.8
2,261,016	-				+1.6
2,261,016	-				+0.5
2,261,016	-				-3.0
2,261,016	-				+1.3
2,261,016	-				+1.0
2,261,016	-				-2.4
2,261,122	+		PfGW456L13_2058	0.13	+1.6
2,261,122	+		PfGW456L13_2058	0.13	-1.1
2,261,122	+		PfGW456L13_2058	0.13	+4.0
2,261,123	-		PfGW456L13_2058	0.13	+0.4
2,261,123	-		PfGW456L13_2058	0.13	+1.0
2,261,125	+		PfGW456L13_2058	0.14	-2.2
2,261,126	-		PfGW456L13_2058	0.14	+2.1
2,261,126	-		PfGW456L13_2058	0.14	+0.2
2,261,261	+		PfGW456L13_2058	0.31	+1.5
2,261,261	+		PfGW456L13_2058	0.31	-1.5
2,261,261	+		PfGW456L13_2058	0.31	+0.7
2,261,261	+		PfGW456L13_2058	0.31	-2.2
2,261,262	-		PfGW456L13_2058	0.31	-3.5
2,261,262	-		PfGW456L13_2058	0.31	+1.8
2,261,262	-		PfGW456L13_2058	0.31	+0.3
2,261,262	-		PfGW456L13_2058	0.31	-1.5
2,261,262	-		PfGW456L13_2058	0.31	-0.6
2,261,262	-		PfGW456L13_2058	0.31	+1.1
2,261,262	-		PfGW456L13_2058	0.31	-3.5
2,261,262	-		PfGW456L13_2058	0.31	-1.4
2,261,262	-		PfGW456L13_2058	0.31	-2.1
2,261,265	+		PfGW456L13_2058	0.32	+1.8
2,261,265	+		PfGW456L13_2058	0.32	+0.3
2,261,265	+		PfGW456L13_2058	0.32	+0.0
2,261,265	+		PfGW456L13_2058	0.32	-3.0
2,261,266	-		PfGW456L13_2058	0.32	+0.6
2,261,266	-		PfGW456L13_2058	0.32	+1.7
2,261,266	-		PfGW456L13_2058	0.32	-1.5
2,261,266	-		PfGW456L13_2058	0.32	-1.7
2,261,266	-		PfGW456L13_2058	0.32	+1.7
2,261,266	-		PfGW456L13_2058	0.32	+1.5
2,261,280	+		PfGW456L13_2058	0.34	+1.5
2,261,280	+		PfGW456L13_2058	0.34	-1.0
2,261,281	-		PfGW456L13_2058	0.34	-2.0
2,261,333	+		PfGW456L13_2058	0.41	-0.1
2,261,397	+		PfGW456L13_2058	0.49	-0.4
2,261,398	-		PfGW456L13_2058	0.49	+0.5
2,261,444	+		PfGW456L13_2058	0.55	+1.8
2,261,445	-		PfGW456L13_2058	0.56	+2.2
2,261,490	+		PfGW456L13_2058	0.61	-1.1
2,261,490	+		PfGW456L13_2058	0.61	+1.5
2,261,490	+		PfGW456L13_2058	0.61	+0.3
2,261,490	+		PfGW456L13_2058	0.61	-2.7
2,261,490	+		PfGW456L13_2058	0.61	-3.0
2,261,490	+		PfGW456L13_2058	0.61	-0.2
2,261,490	+		PfGW456L13_2058	0.61	-3.0
2,261,491	-		PfGW456L13_2058	0.62	+0.2
2,261,491	-		PfGW456L13_2058	0.62	-0.6
2,261,491	-		PfGW456L13_2058	0.62	+2.8
2,261,491	-		PfGW456L13_2058	0.62	+0.2
2,261,491	-		PfGW456L13_2058	0.62	-3.6
2,261,491	-		PfGW456L13_2058	0.62	+0.8
2,261,491	-		PfGW456L13_2058	0.62	+1.8
2,261,501	+		PfGW456L13_2058	0.63	+0.3
2,261,545	-		PfGW456L13_2058	0.69	-1.3
2,261,545	-		PfGW456L13_2058	0.69	-1.1
2,261,600	+		PfGW456L13_2058	0.76	-1.8
2,261,600	+		PfGW456L13_2058	0.76	-2.5
2,261,600	+		PfGW456L13_2058	0.76	+1.9
2,261,601	-		PfGW456L13_2058	0.76	-2.7
2,261,601	-		PfGW456L13_2058	0.76	+2.6
2,261,616	+		PfGW456L13_2058	0.78	-1.5
2,261,616	+		PfGW456L13_2058	0.78	-0.7
2,261,616	+		PfGW456L13_2058	0.78	+0.8
2,261,617	-		PfGW456L13_2058	0.78	-1.1
2,261,617	-		PfGW456L13_2058	0.78	+3.9
2,261,709	+				-2.2
2,261,709	+				+0.1
2,261,710	-				-0.7
2,261,710	-				-0.5
2,261,710	-				+0.2
2,261,710	-				-3.3
2,261,710	-				-3.1
2,261,710	-				+0.7