Strain Fitness in Shewanella loihica PV-4 around Shew_3167
Experiment: Polymyxin B sulfate 20 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Polymyxin B sulfate 20 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,770,122 | + | -0.4 | |||
| 3,770,130 | - | -0.9 | |||
| 3,770,245 | - | -0.1 | |||
| 3,770,245 | - | -1.0 | |||
| 3,770,245 | - | +0.5 | |||
| 3,770,642 | - | Shew_3167 | 0.13 | +0.8 | |
| 3,770,829 | - | Shew_3167 | 0.89 | +0.8 | |
| 3,770,864 | - | -0.2 | |||
| 3,770,950 | + | +0.5 | |||
| 3,770,958 | - | -0.8 | |||
| 3,771,025 | - | +0.8 | |||
| 3,771,246 | - | +1.0 | |||
| 3,771,246 | + | -1.9 | |||
| 3,771,752 | - | Shew_3168 | 0.53 | +0.5 | |
| 3,771,752 | - | Shew_3168 | 0.53 | -0.5 |
Or see this region's nucleotide sequence