Experiment: L-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17295 and AO353_17300 are separated by 3 nucleotides AO353_17300 and AO353_17305 are separated by 267 nucleotides
AO353_17295: AO353_17295 - multidrug transporter, at 3,822,422 to 3,825,589
_17295
AO353_17300: AO353_17300 - antibiotic transporter, at 3,825,593 to 3,826,750
_17300
AO353_17305: AO353_17305 - TetR family transcriptional regulator, at 3,827,018 to 3,827,650
_17305
Position (kb)
3825
3826
3827 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3824.766 kb on + strand, within AO353_17295 at 3824.766 kb on + strand, within AO353_17295 at 3824.767 kb on - strand, within AO353_17295 at 3824.767 kb on - strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.034 kb on + strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.035 kb on - strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.120 kb on + strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.121 kb on - strand, within AO353_17295 at 3825.319 kb on + strand at 3825.343 kb on + strand at 3825.343 kb on + strand at 3825.343 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.360 kb on + strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.361 kb on - strand at 3825.444 kb on + strand at 3825.445 kb on - strand at 3825.445 kb on - strand at 3825.445 kb on - strand at 3825.445 kb on - strand at 3825.515 kb on + strand at 3825.548 kb on + strand at 3825.548 kb on + strand at 3825.548 kb on + strand at 3825.548 kb on + strand at 3825.548 kb on + strand at 3825.548 kb on + strand at 3825.549 kb on - strand at 3825.549 kb on - strand at 3825.594 kb on + strand at 3825.594 kb on + strand at 3825.594 kb on + strand at 3825.594 kb on + strand at 3825.595 kb on - strand at 3825.595 kb on - strand at 3825.622 kb on + strand at 3825.622 kb on + strand at 3825.622 kb on + strand at 3825.622 kb on + strand at 3825.683 kb on + strand at 3825.683 kb on + strand at 3825.683 kb on + strand at 3825.683 kb on + strand at 3826.038 kb on + strand, within AO353_17300 at 3826.038 kb on + strand, within AO353_17300 at 3826.038 kb on + strand, within AO353_17300 at 3826.039 kb on - strand, within AO353_17300 at 3826.039 kb on - strand, within AO353_17300 at 3826.039 kb on - strand, within AO353_17300 at 3826.164 kb on + strand, within AO353_17300 at 3826.164 kb on + strand, within AO353_17300 at 3826.164 kb on + strand, within AO353_17300 at 3826.164 kb on + strand, within AO353_17300 at 3826.164 kb on + strand, within AO353_17300 at 3826.165 kb on - strand, within AO353_17300 at 3826.165 kb on - strand, within AO353_17300 at 3826.165 kb on - strand, within AO353_17300 at 3826.165 kb on - strand, within AO353_17300 at 3826.165 kb on - strand, within AO353_17300 at 3826.272 kb on + strand, within AO353_17300 at 3826.273 kb on - strand, within AO353_17300 at 3826.284 kb on + strand, within AO353_17300 at 3826.354 kb on - strand, within AO353_17300 at 3826.354 kb on - strand, within AO353_17300 at 3826.368 kb on - strand, within AO353_17300 at 3826.395 kb on + strand, within AO353_17300 at 3826.395 kb on + strand, within AO353_17300 at 3826.458 kb on + strand, within AO353_17300 at 3826.458 kb on + strand, within AO353_17300 at 3826.458 kb on + strand, within AO353_17300 at 3826.459 kb on - strand, within AO353_17300 at 3826.459 kb on - strand, within AO353_17300 at 3826.459 kb on - strand, within AO353_17300 at 3826.632 kb on - strand, within AO353_17300 at 3826.682 kb on - strand at 3826.717 kb on + strand at 3826.795 kb on + strand at 3826.795 kb on + strand at 3826.796 kb on - strand at 3826.796 kb on - strand at 3826.796 kb on - strand at 3826.827 kb on + strand at 3826.827 kb on + strand at 3826.827 kb on + strand at 3826.849 kb on - strand at 3826.923 kb on + strand at 3826.924 kb on - strand at 3826.924 kb on - strand at 3826.963 kb on + strand at 3826.963 kb on + strand at 3826.963 kb on + strand at 3826.963 kb on + strand at 3826.963 kb on + strand at 3826.964 kb on - strand at 3826.964 kb on - strand at 3826.976 kb on + strand at 3826.976 kb on + strand at 3826.976 kb on + strand at 3826.976 kb on + strand at 3826.976 kb on + strand at 3826.976 kb on + strand at 3826.977 kb on - strand at 3826.977 kb on - strand at 3826.977 kb on - strand at 3826.977 kb on - strand at 3826.977 kb on - strand at 3826.977 kb on - strand at 3827.011 kb on + strand at 3827.011 kb on + strand at 3827.011 kb on + strand at 3827.012 kb on - strand at 3827.064 kb on + strand at 3827.064 kb on + strand at 3827.065 kb on - strand at 3827.090 kb on + strand, within AO353_17305 at 3827.090 kb on + strand, within AO353_17305 at 3827.090 kb on + strand, within AO353_17305 at 3827.091 kb on - strand, within AO353_17305 at 3827.091 kb on - strand, within AO353_17305 at 3827.091 kb on - strand, within AO353_17305 at 3827.162 kb on + strand, within AO353_17305 at 3827.162 kb on + strand, within AO353_17305 at 3827.162 kb on + strand, within AO353_17305 at 3827.162 kb on + strand, within AO353_17305 at 3827.162 kb on + strand, within AO353_17305 at 3827.163 kb on - strand, within AO353_17305 at 3827.163 kb on - strand, within AO353_17305 at 3827.163 kb on - strand, within AO353_17305 at 3827.456 kb on - strand, within AO353_17305 at 3827.456 kb on - strand, within AO353_17305 at 3827.525 kb on + strand, within AO353_17305 at 3827.525 kb on + strand, within AO353_17305 at 3827.525 kb on + strand, within AO353_17305 at 3827.525 kb on + strand, within AO353_17305 at 3827.525 kb on + strand, within AO353_17305 at 3827.526 kb on - strand, within AO353_17305 at 3827.526 kb on - strand, within AO353_17305 at 3827.526 kb on - strand, within AO353_17305 at 3827.544 kb on - strand, within AO353_17305 at 3827.544 kb on - strand, within AO353_17305 at 3827.662 kb on + strand at 3827.662 kb on + strand at 3827.662 kb on + strand at 3827.662 kb on + strand at 3827.663 kb on - strand at 3827.663 kb on - strand at 3827.663 kb on - strand at 3827.663 kb on - strand at 3827.685 kb on - strand at 3827.724 kb on - strand at 3827.724 kb on - strand at 3827.724 kb on - strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.736 kb on + strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.737 kb on - strand at 3827.738 kb on + strand at 3827.738 kb on + strand at 3827.738 kb on + strand at 3827.738 kb on + strand at 3827.739 kb on - strand at 3827.739 kb on - strand at 3827.739 kb on - strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.740 kb on + strand at 3827.741 kb on - strand at 3827.741 kb on - strand at 3827.741 kb on - strand at 3827.741 kb on - strand at 3827.741 kb on - strand at 3827.741 kb on - strand at 3827.741 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (C) remove 3,824,766 + AO353_17295 0.74 -1.1 3,824,766 + AO353_17295 0.74 +1.0 3,824,767 - AO353_17295 0.74 +0.1 3,824,767 - AO353_17295 0.74 -1.1 3,825,034 + AO353_17295 0.82 +0.1 3,825,034 + AO353_17295 0.82 +1.3 3,825,034 + AO353_17295 0.82 +1.8 3,825,034 + AO353_17295 0.82 -0.4 3,825,034 + AO353_17295 0.82 -0.7 3,825,034 + AO353_17295 0.82 -1.1 3,825,034 + AO353_17295 0.82 -0.3 3,825,034 + AO353_17295 0.82 -0.7 3,825,035 - AO353_17295 0.82 -1.9 3,825,035 - AO353_17295 0.82 +0.5 3,825,035 - AO353_17295 0.82 +1.5 3,825,035 - AO353_17295 0.82 +1.6 3,825,035 - AO353_17295 0.82 -2.3 3,825,035 - AO353_17295 0.82 -0.3 3,825,035 - AO353_17295 0.82 -1.3 3,825,035 - AO353_17295 0.82 +0.7 3,825,120 + AO353_17295 0.85 +1.3 3,825,120 + AO353_17295 0.85 +0.1 3,825,120 + AO353_17295 0.85 -0.2 3,825,120 + AO353_17295 0.85 -1.1 3,825,120 + AO353_17295 0.85 +2.3 3,825,120 + AO353_17295 0.85 -0.1 3,825,120 + AO353_17295 0.85 +0.1 3,825,120 + AO353_17295 0.85 +0.3 3,825,121 - AO353_17295 0.85 -0.1 3,825,121 - AO353_17295 0.85 +0.8 3,825,121 - AO353_17295 0.85 +0.3 3,825,121 - AO353_17295 0.85 +0.7 3,825,121 - AO353_17295 0.85 -0.2 3,825,121 - AO353_17295 0.85 -0.1 3,825,121 - AO353_17295 0.85 +0.1 3,825,121 - AO353_17295 0.85 +0.5 3,825,319 + +0.3 3,825,343 + -0.3 3,825,343 + -0.5 3,825,343 + +0.3 3,825,360 + +1.5 3,825,360 + +1.7 3,825,360 + -1.1 3,825,360 + +0.1 3,825,360 + +0.5 3,825,360 + +0.3 3,825,360 + +0.7 3,825,360 + +0.7 3,825,361 - -0.5 3,825,361 - +0.9 3,825,361 - +0.1 3,825,361 - +0.3 3,825,361 - -0.5 3,825,361 - -1.0 3,825,361 - +3.3 3,825,361 - +1.7 3,825,361 - +0.3 3,825,444 + +1.7 3,825,445 - +1.3 3,825,445 - +0.7 3,825,445 - -0.3 3,825,445 - +0.1 3,825,515 + -0.5 3,825,548 + -1.1 3,825,548 + -0.5 3,825,548 + -0.5 3,825,548 + -1.1 3,825,548 + +0.3 3,825,548 + -0.1 3,825,549 - -0.2 3,825,549 - +1.3 3,825,594 + -1.1 3,825,594 + -0.5 3,825,594 + -0.9 3,825,594 + +1.0 3,825,595 - -0.1 3,825,595 - +0.3 3,825,622 + +1.8 3,825,622 + -0.9 3,825,622 + -0.1 3,825,622 + -0.2 3,825,683 + -0.2 3,825,683 + +1.5 3,825,683 + +0.3 3,825,683 + +0.3 3,826,038 + AO353_17300 0.38 -0.1 3,826,038 + AO353_17300 0.38 +0.3 3,826,038 + AO353_17300 0.38 -1.4 3,826,039 - AO353_17300 0.39 +0.1 3,826,039 - AO353_17300 0.39 -1.0 3,826,039 - AO353_17300 0.39 -0.6 3,826,164 + AO353_17300 0.49 -1.9 3,826,164 + AO353_17300 0.49 -1.1 3,826,164 + AO353_17300 0.49 -1.5 3,826,164 + AO353_17300 0.49 -0.3 3,826,164 + AO353_17300 0.49 -0.1 3,826,165 - AO353_17300 0.49 +1.0 3,826,165 - AO353_17300 0.49 +0.3 3,826,165 - AO353_17300 0.49 -0.4 3,826,165 - AO353_17300 0.49 -1.2 3,826,165 - AO353_17300 0.49 -0.3 3,826,272 + AO353_17300 0.59 +0.7 3,826,273 - AO353_17300 0.59 +0.1 3,826,284 + AO353_17300 0.60 -0.1 3,826,354 - AO353_17300 0.66 -1.7 3,826,354 - AO353_17300 0.66 +0.9 3,826,368 - AO353_17300 0.67 +0.2 3,826,395 + AO353_17300 0.69 -1.4 3,826,395 + AO353_17300 0.69 -0.1 3,826,458 + AO353_17300 0.75 -0.7 3,826,458 + AO353_17300 0.75 +1.3 3,826,458 + AO353_17300 0.75 -0.5 3,826,459 - AO353_17300 0.75 +0.9 3,826,459 - AO353_17300 0.75 -0.2 3,826,459 - AO353_17300 0.75 +0.6 3,826,632 - AO353_17300 0.90 +1.1 3,826,682 - +0.3 3,826,717 + +0.3 3,826,795 + +0.0 3,826,795 + -0.5 3,826,796 - +0.5 3,826,796 - +0.1 3,826,796 - -0.5 3,826,827 + -1.3 3,826,827 + +1.1 3,826,827 + -0.5 3,826,849 - +2.3 3,826,923 + -0.7 3,826,924 - +0.4 3,826,924 - +0.2 3,826,963 + -0.1 3,826,963 + +0.3 3,826,963 + -0.1 3,826,963 + -0.1 3,826,963 + -1.6 3,826,964 - +0.3 3,826,964 - -0.1 3,826,976 + +0.8 3,826,976 + -0.1 3,826,976 + -0.3 3,826,976 + -0.9 3,826,976 + -0.1 3,826,976 + -0.9 3,826,977 - -2.4 3,826,977 - +0.3 3,826,977 - +0.9 3,826,977 - -0.7 3,826,977 - +0.4 3,826,977 - -0.5 3,827,011 + +1.8 3,827,011 + +0.9 3,827,011 + +1.3 3,827,012 - -0.4 3,827,064 + -0.5 3,827,064 + +0.0 3,827,065 - -0.1 3,827,090 + AO353_17305 0.11 +1.4 3,827,090 + AO353_17305 0.11 +0.9 3,827,090 + AO353_17305 0.11 +1.1 3,827,091 - AO353_17305 0.12 -0.7 3,827,091 - AO353_17305 0.12 -0.2 3,827,091 - AO353_17305 0.12 -0.2 3,827,162 + AO353_17305 0.23 -1.0 3,827,162 + AO353_17305 0.23 +0.1 3,827,162 + AO353_17305 0.23 -0.7 3,827,162 + AO353_17305 0.23 +0.3 3,827,162 + AO353_17305 0.23 +0.1 3,827,163 - AO353_17305 0.23 +0.3 3,827,163 - AO353_17305 0.23 -0.6 3,827,163 - AO353_17305 0.23 -0.9 3,827,456 - AO353_17305 0.69 +0.5 3,827,456 - AO353_17305 0.69 -1.2 3,827,525 + AO353_17305 0.80 +0.4 3,827,525 + AO353_17305 0.80 +0.7 3,827,525 + AO353_17305 0.80 +3.3 3,827,525 + AO353_17305 0.80 -0.5 3,827,525 + AO353_17305 0.80 +0.3 3,827,526 - AO353_17305 0.80 +0.9 3,827,526 - AO353_17305 0.80 +0.2 3,827,526 - AO353_17305 0.80 +0.5 3,827,544 - AO353_17305 0.83 +0.5 3,827,544 - AO353_17305 0.83 -0.2 3,827,662 + +0.9 3,827,662 + -0.1 3,827,662 + -0.1 3,827,662 + -1.4 3,827,663 - -0.9 3,827,663 - -0.3 3,827,663 - +1.8 3,827,663 - +1.0 3,827,685 - +0.7 3,827,724 - +0.7 3,827,724 - +0.3 3,827,724 - +1.3 3,827,736 + +0.3 3,827,736 + -0.0 3,827,736 + -0.4 3,827,736 + +0.4 3,827,736 + -0.2 3,827,736 + -0.4 3,827,736 + +0.7 3,827,736 + +0.7 3,827,736 + -0.7 3,827,736 + -0.1 3,827,736 + +0.9 3,827,736 + +0.4 3,827,736 + +0.5 3,827,736 + +2.1 3,827,736 + -2.2 3,827,736 + +0.3 3,827,737 - -0.6 3,827,737 - -0.2 3,827,737 - +1.1 3,827,737 - -2.1 3,827,737 - -0.1 3,827,737 - +0.1 3,827,737 - -1.0 3,827,737 - +0.9 3,827,737 - -0.1 3,827,737 - +1.5 3,827,737 - -0.7 3,827,738 + -0.7 3,827,738 + -1.9 3,827,738 + +0.1 3,827,738 + +0.1 3,827,739 - -0.1 3,827,739 - +0.8 3,827,739 - -0.3 3,827,740 + +0.1 3,827,740 + +0.3 3,827,740 + -0.4 3,827,740 + -0.3 3,827,740 + +0.3 3,827,740 + +0.9 3,827,740 + +0.0 3,827,741 - -0.5 3,827,741 - -0.1 3,827,741 - +0.1 3,827,741 - -1.7 3,827,741 - +1.4 3,827,741 - +0.5 3,827,741 - -0.3
Or see this region's nucleotide sequence