Experiment: Beta-alanine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16930 and ABZR87_RS16935 are separated by 274 nucleotides ABZR87_RS16935 and ABZR87_RS16940 are separated by 34 nucleotides ABZR87_RS16940 and ABZR87_RS16945 are separated by 88 nucleotides
ABZR87_RS16930: ABZR87_RS16930 - MASE4 domain-containing protein, at 153,272 to 154,198
_RS16930
ABZR87_RS16935: ABZR87_RS16935 - enoyl-CoA hydratase, at 154,473 to 155,276
_RS16935
ABZR87_RS16940: ABZR87_RS16940 - thioredoxin family protein, at 155,311 to 155,865
_RS16940
ABZR87_RS16945: ABZR87_RS16945 - organic hydroperoxide resistance protein, at 155,954 to 156,370
_RS16945
Position (kb) 154
155
156 Strain fitness (log2 ratio) -2
-1
0
1 at 153.542 kb on + strand, within ABZR87_RS16930 at 153.543 kb on - strand, within ABZR87_RS16930 at 153.543 kb on - strand, within ABZR87_RS16930 at 153.543 kb on - strand, within ABZR87_RS16930 at 153.543 kb on - strand, within ABZR87_RS16930 at 153.730 kb on - strand, within ABZR87_RS16930 at 153.781 kb on - strand, within ABZR87_RS16930 at 153.822 kb on + strand, within ABZR87_RS16930 at 153.822 kb on + strand, within ABZR87_RS16930 at 153.823 kb on - strand, within ABZR87_RS16930 at 153.823 kb on - strand, within ABZR87_RS16930 at 153.823 kb on - strand, within ABZR87_RS16930 at 153.823 kb on - strand, within ABZR87_RS16930 at 154.037 kb on + strand, within ABZR87_RS16930 at 154.134 kb on + strand at 154.163 kb on + strand at 154.164 kb on - strand at 154.300 kb on + strand at 154.301 kb on - strand at 154.301 kb on - strand at 154.312 kb on - strand at 154.351 kb on - strand at 154.393 kb on - strand at 154.432 kb on - strand at 154.731 kb on + strand, within ABZR87_RS16935 at 154.732 kb on - strand, within ABZR87_RS16935 at 154.732 kb on - strand, within ABZR87_RS16935 at 154.732 kb on - strand, within ABZR87_RS16935 at 154.732 kb on - strand, within ABZR87_RS16935 at 154.734 kb on + strand, within ABZR87_RS16935 at 154.997 kb on + strand, within ABZR87_RS16935 at 154.997 kb on + strand, within ABZR87_RS16935 at 155.172 kb on + strand, within ABZR87_RS16935 at 155.172 kb on + strand, within ABZR87_RS16935 at 155.172 kb on + strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.173 kb on - strand, within ABZR87_RS16935 at 155.178 kb on + strand, within ABZR87_RS16935 at 155.179 kb on - strand, within ABZR87_RS16935 at 155.179 kb on - strand, within ABZR87_RS16935 at 155.274 kb on + strand at 155.274 kb on + strand at 155.274 kb on + strand at 155.399 kb on + strand, within ABZR87_RS16940 at 155.399 kb on + strand, within ABZR87_RS16940 at 155.399 kb on + strand, within ABZR87_RS16940 at 155.429 kb on + strand, within ABZR87_RS16940 at 155.429 kb on + strand, within ABZR87_RS16940 at 155.430 kb on - strand, within ABZR87_RS16940 at 155.474 kb on + strand, within ABZR87_RS16940 at 155.474 kb on + strand, within ABZR87_RS16940 at 155.474 kb on + strand, within ABZR87_RS16940 at 155.474 kb on + strand, within ABZR87_RS16940 at 155.474 kb on + strand, within ABZR87_RS16940 at 155.475 kb on - strand, within ABZR87_RS16940 at 155.558 kb on + strand, within ABZR87_RS16940 at 155.558 kb on + strand, within ABZR87_RS16940 at 155.559 kb on - strand, within ABZR87_RS16940 at 155.604 kb on - strand, within ABZR87_RS16940 at 155.612 kb on + strand, within ABZR87_RS16940 at 155.613 kb on - strand, within ABZR87_RS16940 at 155.660 kb on + strand, within ABZR87_RS16940 at 155.660 kb on + strand, within ABZR87_RS16940 at 155.660 kb on + strand, within ABZR87_RS16940 at 155.660 kb on + strand, within ABZR87_RS16940 at 155.660 kb on + strand, within ABZR87_RS16940 at 155.661 kb on - strand, within ABZR87_RS16940 at 155.661 kb on - strand, within ABZR87_RS16940 at 155.739 kb on + strand, within ABZR87_RS16940 at 155.739 kb on + strand, within ABZR87_RS16940 at 155.814 kb on - strand at 155.814 kb on - strand at 155.880 kb on - strand at 155.919 kb on + strand at 155.920 kb on - strand at 155.928 kb on + strand at 155.928 kb on + strand at 155.928 kb on + strand at 155.928 kb on + strand at 155.928 kb on + strand at 155.928 kb on + strand at 155.929 kb on - strand at 155.929 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-alanine (C) remove 153,542 + ABZR87_RS16930 0.29 +0.3 153,543 - ABZR87_RS16930 0.29 -0.4 153,543 - ABZR87_RS16930 0.29 +0.3 153,543 - ABZR87_RS16930 0.29 -0.9 153,543 - ABZR87_RS16930 0.29 -0.1 153,730 - ABZR87_RS16930 0.49 +0.0 153,781 - ABZR87_RS16930 0.55 +0.3 153,822 + ABZR87_RS16930 0.59 +0.4 153,822 + ABZR87_RS16930 0.59 +0.5 153,823 - ABZR87_RS16930 0.59 +0.4 153,823 - ABZR87_RS16930 0.59 +0.0 153,823 - ABZR87_RS16930 0.59 -0.2 153,823 - ABZR87_RS16930 0.59 +0.1 154,037 + ABZR87_RS16930 0.83 +0.9 154,134 + +0.6 154,163 + -0.2 154,164 - +0.2 154,300 + -0.8 154,301 - +0.2 154,301 - +1.1 154,312 - -1.1 154,351 - -0.4 154,393 - +1.2 154,432 - -0.1 154,731 + ABZR87_RS16935 0.32 +0.2 154,732 - ABZR87_RS16935 0.32 +0.4 154,732 - ABZR87_RS16935 0.32 -0.9 154,732 - ABZR87_RS16935 0.32 -0.2 154,732 - ABZR87_RS16935 0.32 -0.5 154,734 + ABZR87_RS16935 0.32 +1.0 154,997 + ABZR87_RS16935 0.65 +0.3 154,997 + ABZR87_RS16935 0.65 +0.3 155,172 + ABZR87_RS16935 0.87 -0.0 155,172 + ABZR87_RS16935 0.87 +0.0 155,172 + ABZR87_RS16935 0.87 +0.6 155,173 - ABZR87_RS16935 0.87 -0.4 155,173 - ABZR87_RS16935 0.87 -1.2 155,173 - ABZR87_RS16935 0.87 -1.2 155,173 - ABZR87_RS16935 0.87 +0.2 155,173 - ABZR87_RS16935 0.87 +0.5 155,173 - ABZR87_RS16935 0.87 +0.8 155,178 + ABZR87_RS16935 0.88 -0.0 155,179 - ABZR87_RS16935 0.88 -1.1 155,179 - ABZR87_RS16935 0.88 +0.6 155,274 + -0.8 155,274 + +0.5 155,274 + +0.5 155,399 + ABZR87_RS16940 0.16 -1.3 155,399 + ABZR87_RS16940 0.16 -0.1 155,399 + ABZR87_RS16940 0.16 -0.4 155,429 + ABZR87_RS16940 0.21 -0.2 155,429 + ABZR87_RS16940 0.21 +0.0 155,430 - ABZR87_RS16940 0.21 +0.5 155,474 + ABZR87_RS16940 0.29 +1.0 155,474 + ABZR87_RS16940 0.29 -1.3 155,474 + ABZR87_RS16940 0.29 -0.1 155,474 + ABZR87_RS16940 0.29 +0.1 155,474 + ABZR87_RS16940 0.29 -0.2 155,475 - ABZR87_RS16940 0.30 -0.1 155,558 + ABZR87_RS16940 0.45 +0.3 155,558 + ABZR87_RS16940 0.45 -0.1 155,559 - ABZR87_RS16940 0.45 -0.5 155,604 - ABZR87_RS16940 0.53 +0.2 155,612 + ABZR87_RS16940 0.54 -0.6 155,613 - ABZR87_RS16940 0.54 -0.1 155,660 + ABZR87_RS16940 0.63 -0.3 155,660 + ABZR87_RS16940 0.63 +0.7 155,660 + ABZR87_RS16940 0.63 +0.4 155,660 + ABZR87_RS16940 0.63 +0.3 155,660 + ABZR87_RS16940 0.63 -0.3 155,661 - ABZR87_RS16940 0.63 -0.1 155,661 - ABZR87_RS16940 0.63 +0.3 155,739 + ABZR87_RS16940 0.77 +0.2 155,739 + ABZR87_RS16940 0.77 +0.2 155,814 - -1.0 155,814 - +0.6 155,880 - -0.6 155,919 + -0.4 155,920 - +0.4 155,928 + -0.3 155,928 + +0.4 155,928 + -1.9 155,928 + +0.5 155,928 + -0.3 155,928 + +0.1 155,929 - +0.4 155,929 - -0.9
Or see this region's nucleotide sequence