Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4904

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
5,427,111	-		Pf1N1B4_4903	0.42	-0.7
5,427,266	+		Pf1N1B4_4903	0.54	+0.1
5,427,435	-		Pf1N1B4_4903	0.66	-1.8
5,427,435	-		Pf1N1B4_4903	0.66	+1.4
5,427,629	-		Pf1N1B4_4903	0.80	-0.3
5,427,629	-		Pf1N1B4_4903	0.80	-0.7
5,427,629	-		Pf1N1B4_4903	0.80	+0.7
5,427,629	-		Pf1N1B4_4903	0.80	-1.7
5,427,815	+				-1.1
5,427,816	-				-0.0
5,427,816	-				-1.3
5,427,816	-				+0.7
5,427,816	-				-0.3
5,427,819	-				-0.2
5,427,819	-				-0.7
5,428,070	+				-2.3
5,428,070	+				+0.2
5,428,071	-				+1.2
5,428,071	-				+0.8
5,428,071	-				+0.2
5,428,116	+				+0.2
5,428,117	-				+0.1
5,428,117	-				-1.3
5,428,147	-				-0.3
5,428,190	+				-1.3
5,428,287	-				+1.2
5,428,287	-				-0.3
5,428,287	-				+0.3
5,428,404	-		Pf1N1B4_4904	0.10	+1.2
5,428,404	-		Pf1N1B4_4904	0.10	+1.7
5,428,404	-		Pf1N1B4_4904	0.10	+1.2
5,428,527	-		Pf1N1B4_4904	0.14	+0.7
5,428,542	-		Pf1N1B4_4904	0.15	+1.8
5,428,568	-		Pf1N1B4_4904	0.16	+1.0
5,428,616	+				-0.3
5,428,617	-		Pf1N1B4_4904	0.17	-0.3
5,428,847	+		Pf1N1B4_4904	0.25	-0.2
5,428,916	+		Pf1N1B4_4904	0.27	-0.9
5,428,917	-		Pf1N1B4_4904	0.27	-1.7
5,428,941	-		Pf1N1B4_4904	0.28	-0.3
5,428,941	-				+0.7
5,428,948	+		Pf1N1B4_4904	0.29	+0.6
5,429,075	+		Pf1N1B4_4904	0.33	+1.8
5,429,076	-		Pf1N1B4_4904	0.33	+2.5
5,429,451	-		Pf1N1B4_4904	0.45	-0.3
5,429,510	+		Pf1N1B4_4904	0.47	+0.1
5,429,758	+		Pf1N1B4_4904	0.56	+1.0
5,429,864	+		Pf1N1B4_4904	0.59	+0.5
5,429,865	-		Pf1N1B4_4904	0.59	+1.5
5,429,865	-		Pf1N1B4_4904	0.59	-0.9
5,429,924	+		Pf1N1B4_4904	0.61	-1.7
5,429,924	+		Pf1N1B4_4904	0.61	+2.5
5,429,925	-		Pf1N1B4_4904	0.61	+0.8
5,430,446	+		Pf1N1B4_4904	0.79	+1.5
5,430,446	+				+2.0
5,430,510	-		Pf1N1B4_4904	0.81	+0.9
5,430,672	-		Pf1N1B4_4904	0.87	-0.3
5,430,998	+				-0.2
5,431,141	+				+0.9
5,431,155	-				-1.0
5,431,260	+				+0.7
5,431,260	+				+1.2
5,431,260	+				-1.7
5,431,261	-				+0.1
5,431,261	-				+0.0
5,431,261	-				+0.4
5,431,264	+				-1.7
5,431,265	-				+2.7
5,431,265	-				-0.0
5,431,265	-				+0.7
5,431,330	+				-2.3
5,431,336	-				+0.1
5,431,497	-				-0.6
5,431,586	-				+2.2
5,431,634	+		Pf1N1B4_4905	0.11	+0.1
5,431,634	+				+0.4
5,431,635	-		Pf1N1B4_4905	0.11	-1.3
5,431,667	+				-0.3
5,431,668	-		Pf1N1B4_4905	0.13	+0.1
5,431,859	+		Pf1N1B4_4905	0.19	+0.9
5,431,860	-		Pf1N1B4_4905	0.19	-2.3
5,432,048	+				-1.3
5,432,049	-		Pf1N1B4_4905	0.25	-0.3