Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3970

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,410,640	+		Pf1N1B4_3969	0.18	+0.6
4,410,641	-		Pf1N1B4_3969	0.18	-0.5
4,410,820	+		Pf1N1B4_3969	0.34	+0.2
4,410,820	+		Pf1N1B4_3969	0.34	+0.4
4,410,820	+		Pf1N1B4_3969	0.34	-2.2
4,410,821	-				+2.2
4,410,821	-		Pf1N1B4_3969	0.34	+0.1
4,410,821	-		Pf1N1B4_3969	0.34	+2.2
4,410,821	-		Pf1N1B4_3969	0.34	-0.2
4,410,821	-		Pf1N1B4_3969	0.34	-2.2
4,410,821	-		Pf1N1B4_3969	0.34	-0.2
4,410,821	-		Pf1N1B4_3969	0.34	+1.4
4,411,249	+		Pf1N1B4_3969	0.72	+1.0
4,411,420	+		Pf1N1B4_3969	0.88	+0.2
4,411,420	+		Pf1N1B4_3969	0.88	-0.6
4,412,022	+		Pf1N1B4_3970	0.35	+2.0
4,412,022	+		Pf1N1B4_3970	0.35	-1.7
4,412,023	-		Pf1N1B4_3970	0.35	-0.4
4,412,517	+		Pf1N1B4_3970	0.71	+0.2
4,412,517	+				-1.2
4,412,517	+				-1.7
4,412,517	+		Pf1N1B4_3970	0.71	-0.7
4,412,517	+		Pf1N1B4_3970	0.71	+0.1
4,412,517	+		Pf1N1B4_3970	0.71	-0.6
4,412,518	-		Pf1N1B4_3970	0.71	-0.2
4,412,518	-		Pf1N1B4_3970	0.71	-1.2
4,412,518	-		Pf1N1B4_3970	0.71	-1.7
4,412,742	+		Pf1N1B4_3970	0.88	-1.4
4,412,742	+		Pf1N1B4_3970	0.88	-1.0
4,412,742	+		Pf1N1B4_3970	0.88	+0.5
4,412,742	+		Pf1N1B4_3970	0.88	-1.4
4,412,743	-		Pf1N1B4_3970	0.88	-1.0
4,412,787	+				+0.7
4,412,787	+				+1.3
4,412,908	+				-0.2
4,412,919	+				-0.7
4,412,919	+				-0.7
4,412,919	+				+2.4
4,412,919	+				-1.0
4,412,919	+				+1.4
4,412,919	+				-0.0
4,412,919	+				-0.2
4,412,919	+				+1.8
4,412,919	+				-0.2
4,412,919	+				+1.3
4,412,920	-				-0.2
4,412,920	-				+0.8
4,412,920	-				-0.8
4,412,920	-				+1.8
4,412,920	-				+0.4
4,412,920	-				-0.7
4,412,920	-				+0.2
4,412,982	+				+0.8
4,412,982	+				+2.6
4,412,982	+				+0.8
4,412,982	+				-0.1
4,412,983	-				+0.6
4,412,983	-				+0.2
4,413,066	+				-0.2
4,413,067	-				+0.3
4,413,067	-				-1.7
4,413,067	-				-0.7
4,413,067	-				+1.2
4,413,489	+		Pf1N1B4_3972	0.16	-1.3
4,413,490	-		Pf1N1B4_3972	0.16	-0.2
4,413,495	+				-0.2
4,413,495	+		Pf1N1B4_3972	0.17	-2.2
4,413,495	+				+1.4
4,413,496	-		Pf1N1B4_3972	0.17	+1.0
4,413,496	-		Pf1N1B4_3972	0.17	-1.2
4,413,727	-		Pf1N1B4_3972	0.46	-0.1
4,413,727	-		Pf1N1B4_3972	0.46	-0.2