Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16785 and AO353_16790 are separated by 18 nucleotides AO353_16790 and AO353_16795 overlap by 19 nucleotides AO353_16795 and AO353_16800 are separated by 82 nucleotides AO353_16800 and AO353_16805 are separated by 83 nucleotides
AO353_16785: AO353_16785 - hypothetical protein, at 3,718,797 to 3,719,810
_16785
AO353_16790: AO353_16790 - lysozyme, at 3,719,829 to 3,720,392
_16790
AO353_16795: AO353_16795 - lysozyme, at 3,720,374 to 3,720,910
_16795
AO353_16800: AO353_16800 - damage-inducible protein CinA, at 3,720,993 to 3,721,493
_16800
AO353_16805: AO353_16805 - recombinase RecA, at 3,721,577 to 3,722,629
_16805
Position (kb)
3720
3721 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3719.414 kb on + strand, within AO353_16785 at 3719.471 kb on + strand, within AO353_16785 at 3719.471 kb on + strand, within AO353_16785 at 3719.471 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.477 kb on + strand, within AO353_16785 at 3719.478 kb on - strand, within AO353_16785 at 3719.478 kb on - strand, within AO353_16785 at 3719.478 kb on - strand, within AO353_16785 at 3719.478 kb on - strand, within AO353_16785 at 3719.478 kb on - strand, within AO353_16785 at 3719.484 kb on - strand, within AO353_16785 at 3719.562 kb on + strand, within AO353_16785 at 3719.563 kb on - strand, within AO353_16785 at 3719.563 kb on - strand, within AO353_16785 at 3719.563 kb on - strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.622 kb on + strand, within AO353_16785 at 3719.623 kb on - strand, within AO353_16785 at 3719.623 kb on - strand, within AO353_16785 at 3719.623 kb on - strand, within AO353_16785 at 3719.623 kb on - strand, within AO353_16785 at 3719.624 kb on + strand, within AO353_16785 at 3719.708 kb on - strand, within AO353_16785 at 3719.708 kb on - strand, within AO353_16785 at 3719.738 kb on + strand at 3719.793 kb on + strand at 3719.793 kb on + strand at 3719.793 kb on + strand at 3719.793 kb on + strand at 3719.794 kb on - strand at 3719.794 kb on - strand at 3719.794 kb on - strand at 3719.794 kb on - strand at 3719.794 kb on - strand at 3719.805 kb on + strand at 3719.805 kb on + strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.806 kb on - strand at 3719.808 kb on + strand at 3719.808 kb on + strand at 3719.808 kb on + strand at 3719.808 kb on + strand at 3719.808 kb on + strand at 3719.809 kb on - strand at 3719.809 kb on - strand at 3719.809 kb on - strand at 3719.809 kb on - strand at 3719.815 kb on + strand at 3719.815 kb on + strand at 3719.815 kb on + strand at 3719.815 kb on + strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.816 kb on - strand at 3719.828 kb on + strand at 3719.828 kb on + strand at 3719.829 kb on - strand at 3719.829 kb on - strand at 3719.829 kb on - strand at 3719.837 kb on + strand at 3719.837 kb on + strand at 3719.837 kb on + strand at 3719.838 kb on - strand at 3719.838 kb on - strand at 3719.838 kb on - strand at 3719.838 kb on - strand at 3719.838 kb on - strand at 3719.838 kb on - strand at 3719.860 kb on + strand at 3719.861 kb on - strand at 3719.861 kb on - strand at 3719.997 kb on + strand, within AO353_16790 at 3719.997 kb on + strand, within AO353_16790 at 3719.997 kb on + strand, within AO353_16790 at 3720.024 kb on + strand, within AO353_16790 at 3720.024 kb on + strand, within AO353_16790 at 3720.024 kb on + strand, within AO353_16790 at 3720.024 kb on + strand, within AO353_16790 at 3720.025 kb on - strand, within AO353_16790 at 3720.025 kb on - strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.036 kb on + strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.037 kb on - strand, within AO353_16790 at 3720.071 kb on + strand, within AO353_16790 at 3720.072 kb on - strand, within AO353_16790 at 3720.072 kb on - strand, within AO353_16790 at 3720.072 kb on - strand, within AO353_16790 at 3720.140 kb on + strand, within AO353_16790 at 3720.144 kb on + strand, within AO353_16790 at 3720.144 kb on + strand, within AO353_16790 at 3720.144 kb on + strand, within AO353_16790 at 3720.144 kb on + strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.145 kb on - strand, within AO353_16790 at 3720.373 kb on + strand at 3720.426 kb on + strand at 3720.426 kb on + strand at 3720.629 kb on + strand, within AO353_16795 at 3720.629 kb on + strand, within AO353_16795 at 3720.629 kb on + strand, within AO353_16795 at 3720.630 kb on - strand, within AO353_16795 at 3720.630 kb on - strand, within AO353_16795 at 3720.630 kb on - strand, within AO353_16795 at 3720.630 kb on - strand, within AO353_16795 at 3720.630 kb on - strand, within AO353_16795 at 3720.792 kb on + strand, within AO353_16795 at 3720.792 kb on + strand, within AO353_16795 at 3720.793 kb on - strand, within AO353_16795 at 3720.793 kb on - strand, within AO353_16795 at 3720.887 kb on + strand at 3720.887 kb on + strand at 3720.887 kb on + strand at 3720.887 kb on + strand at 3720.888 kb on - strand at 3720.888 kb on - strand at 3720.888 kb on - strand at 3720.954 kb on + strand at 3720.954 kb on + strand at 3720.954 kb on + strand at 3720.955 kb on - strand at 3720.955 kb on - strand at 3720.955 kb on - strand at 3720.981 kb on + strand at 3720.982 kb on - strand at 3720.982 kb on - strand at 3720.982 kb on - strand at 3721.025 kb on - strand at 3721.025 kb on - strand at 3721.143 kb on + strand, within AO353_16800 at 3721.143 kb on + strand, within AO353_16800 at 3721.143 kb on + strand, within AO353_16800 at 3721.143 kb on + strand, within AO353_16800 at 3721.144 kb on - strand, within AO353_16800 at 3721.144 kb on - strand, within AO353_16800 at 3721.144 kb on - strand, within AO353_16800 at 3721.152 kb on + strand, within AO353_16800 at 3721.152 kb on + strand, within AO353_16800 at 3721.153 kb on - strand, within AO353_16800 at 3721.153 kb on - strand, within AO353_16800 at 3721.153 kb on - strand, within AO353_16800 at 3721.153 kb on - strand, within AO353_16800 at 3721.153 kb on - strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.246 kb on + strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.247 kb on - strand, within AO353_16800 at 3721.320 kb on - strand, within AO353_16800 at 3721.320 kb on - strand, within AO353_16800 at 3721.320 kb on - strand, within AO353_16800 at 3721.377 kb on + strand, within AO353_16800 at 3721.377 kb on + strand, within AO353_16800 at 3721.378 kb on - strand, within AO353_16800 at 3721.461 kb on + strand at 3721.461 kb on + strand at 3721.461 kb on + strand at 3721.461 kb on + strand at 3721.461 kb on + strand at 3721.461 kb on + strand at 3721.462 kb on - strand at 3721.462 kb on - strand at 3721.462 kb on - strand at 3721.462 kb on - strand at 3721.463 kb on + strand at 3721.463 kb on + strand at 3721.463 kb on + strand at 3721.464 kb on - strand at 3721.464 kb on - strand at 3721.464 kb on - strand at 3721.530 kb on + strand at 3721.555 kb on + strand at 3721.562 kb on + strand at 3721.562 kb on + strand at 3721.562 kb on + strand at 3721.562 kb on + strand at 3721.575 kb on + strand at 3721.658 kb on - strand at 3721.658 kb on - strand at 3721.767 kb on - strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.880 kb on + strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805 at 3721.881 kb on - strand, within AO353_16805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,719,414 + AO353_16785 0.61 -0.1 3,719,471 + AO353_16785 0.66 +1.0 3,719,471 + AO353_16785 0.66 -1.7 3,719,471 + AO353_16785 0.66 -0.7 3,719,477 + AO353_16785 0.67 -1.4 3,719,477 + AO353_16785 0.67 -0.7 3,719,477 + AO353_16785 0.67 +1.2 3,719,477 + AO353_16785 0.67 -0.5 3,719,477 + AO353_16785 0.67 -0.1 3,719,477 + AO353_16785 0.67 +0.0 3,719,478 - AO353_16785 0.67 +0.8 3,719,478 - AO353_16785 0.67 -0.5 3,719,478 - AO353_16785 0.67 +1.2 3,719,478 - AO353_16785 0.67 +1.3 3,719,478 - AO353_16785 0.67 -0.5 3,719,484 - AO353_16785 0.68 -0.1 3,719,562 + AO353_16785 0.75 -0.5 3,719,563 - AO353_16785 0.76 -0.3 3,719,563 - AO353_16785 0.76 -0.7 3,719,563 - AO353_16785 0.76 +0.7 3,719,622 + AO353_16785 0.81 -0.0 3,719,622 + AO353_16785 0.81 +0.4 3,719,622 + AO353_16785 0.81 -0.1 3,719,622 + AO353_16785 0.81 -0.9 3,719,622 + AO353_16785 0.81 -2.9 3,719,622 + AO353_16785 0.81 -0.8 3,719,623 - AO353_16785 0.81 -0.1 3,719,623 - AO353_16785 0.81 -0.0 3,719,623 - AO353_16785 0.81 +0.0 3,719,623 - AO353_16785 0.81 -0.4 3,719,624 + AO353_16785 0.82 -0.1 3,719,708 - AO353_16785 0.90 +0.1 3,719,708 - AO353_16785 0.90 +0.5 3,719,738 + +0.4 3,719,793 + -0.2 3,719,793 + +2.8 3,719,793 + +0.3 3,719,793 + -2.2 3,719,794 - +0.2 3,719,794 - +2.2 3,719,794 - +0.1 3,719,794 - +0.8 3,719,794 - +0.8 3,719,805 + +1.5 3,719,805 + +1.5 3,719,806 - +0.2 3,719,806 - +0.2 3,719,806 - +1.5 3,719,806 - +0.0 3,719,806 - +0.8 3,719,806 - -0.7 3,719,806 - -0.3 3,719,808 + +0.6 3,719,808 + -0.7 3,719,808 + +0.5 3,719,808 + -1.9 3,719,808 + -1.8 3,719,809 - -1.1 3,719,809 - -1.1 3,719,809 - +0.7 3,719,809 - -0.1 3,719,815 + -1.0 3,719,815 + +0.7 3,719,815 + +0.7 3,719,815 + +0.5 3,719,816 - -0.3 3,719,816 - +0.1 3,719,816 - +1.5 3,719,816 - +0.8 3,719,816 - +0.5 3,719,816 - -0.5 3,719,816 - -0.6 3,719,816 - +0.3 3,719,816 - -0.8 3,719,828 + +1.1 3,719,828 + -0.3 3,719,829 - -1.8 3,719,829 - +1.5 3,719,829 - -0.5 3,719,837 + +1.5 3,719,837 + -0.2 3,719,837 + +0.1 3,719,838 - -0.5 3,719,838 - +0.2 3,719,838 - +0.7 3,719,838 - +1.5 3,719,838 - +0.3 3,719,838 - -0.4 3,719,860 + +0.1 3,719,861 - -0.4 3,719,861 - +0.2 3,719,997 + AO353_16790 0.30 +0.1 3,719,997 + AO353_16790 0.30 -1.0 3,719,997 + AO353_16790 0.30 +1.5 3,720,024 + AO353_16790 0.35 +0.9 3,720,024 + AO353_16790 0.35 +0.8 3,720,024 + AO353_16790 0.35 +0.4 3,720,024 + AO353_16790 0.35 -0.3 3,720,025 - AO353_16790 0.35 -0.8 3,720,025 - AO353_16790 0.35 -0.9 3,720,036 + AO353_16790 0.37 +1.2 3,720,036 + AO353_16790 0.37 -0.5 3,720,036 + AO353_16790 0.37 +0.3 3,720,036 + AO353_16790 0.37 -0.3 3,720,036 + AO353_16790 0.37 +0.6 3,720,036 + AO353_16790 0.37 +0.3 3,720,036 + AO353_16790 0.37 -0.7 3,720,036 + AO353_16790 0.37 -2.3 3,720,037 - AO353_16790 0.37 -0.5 3,720,037 - AO353_16790 0.37 +0.3 3,720,037 - AO353_16790 0.37 -0.6 3,720,037 - AO353_16790 0.37 +0.9 3,720,037 - AO353_16790 0.37 -1.8 3,720,037 - AO353_16790 0.37 +0.6 3,720,037 - AO353_16790 0.37 +0.5 3,720,037 - AO353_16790 0.37 +0.4 3,720,071 + AO353_16790 0.43 +1.1 3,720,072 - AO353_16790 0.43 -0.5 3,720,072 - AO353_16790 0.43 -0.9 3,720,072 - AO353_16790 0.43 -0.6 3,720,140 + AO353_16790 0.55 -0.1 3,720,144 + AO353_16790 0.56 +0.8 3,720,144 + AO353_16790 0.56 +1.5 3,720,144 + AO353_16790 0.56 +0.8 3,720,144 + AO353_16790 0.56 +1.2 3,720,145 - AO353_16790 0.56 -0.8 3,720,145 - AO353_16790 0.56 -0.3 3,720,145 - AO353_16790 0.56 -0.7 3,720,145 - AO353_16790 0.56 -2.0 3,720,145 - AO353_16790 0.56 -0.1 3,720,145 - AO353_16790 0.56 -0.8 3,720,373 + -1.3 3,720,426 + -0.2 3,720,426 + +0.3 3,720,629 + AO353_16795 0.47 -0.1 3,720,629 + AO353_16795 0.47 +0.6 3,720,629 + AO353_16795 0.47 -2.0 3,720,630 - AO353_16795 0.48 +1.2 3,720,630 - AO353_16795 0.48 +0.5 3,720,630 - AO353_16795 0.48 +0.0 3,720,630 - AO353_16795 0.48 +0.5 3,720,630 - AO353_16795 0.48 +1.9 3,720,792 + AO353_16795 0.78 +0.4 3,720,792 + AO353_16795 0.78 -0.6 3,720,793 - AO353_16795 0.78 +1.7 3,720,793 - AO353_16795 0.78 +0.1 3,720,887 + +0.4 3,720,887 + -0.8 3,720,887 + -1.1 3,720,887 + -0.4 3,720,888 - +0.9 3,720,888 - -0.2 3,720,888 - +0.1 3,720,954 + +0.8 3,720,954 + -0.6 3,720,954 + -0.1 3,720,955 - -1.4 3,720,955 - -1.7 3,720,955 - +1.2 3,720,981 + -2.6 3,720,982 - +0.9 3,720,982 - -0.4 3,720,982 - +1.1 3,721,025 - -1.5 3,721,025 - +0.2 3,721,143 + AO353_16800 0.30 -0.6 3,721,143 + AO353_16800 0.30 -0.4 3,721,143 + AO353_16800 0.30 +0.3 3,721,143 + AO353_16800 0.30 -0.3 3,721,144 - AO353_16800 0.30 +1.5 3,721,144 - AO353_16800 0.30 +0.9 3,721,144 - AO353_16800 0.30 +0.1 3,721,152 + AO353_16800 0.32 +0.5 3,721,152 + AO353_16800 0.32 -0.1 3,721,153 - AO353_16800 0.32 -0.4 3,721,153 - AO353_16800 0.32 +0.4 3,721,153 - AO353_16800 0.32 -0.1 3,721,153 - AO353_16800 0.32 +0.5 3,721,153 - AO353_16800 0.32 +0.6 3,721,246 + AO353_16800 0.50 -0.7 3,721,246 + AO353_16800 0.50 -1.1 3,721,246 + AO353_16800 0.50 -0.3 3,721,246 + AO353_16800 0.50 -0.2 3,721,246 + AO353_16800 0.50 -0.4 3,721,246 + AO353_16800 0.50 -0.4 3,721,246 + AO353_16800 0.50 -0.8 3,721,246 + AO353_16800 0.50 +0.6 3,721,247 - AO353_16800 0.51 -0.1 3,721,247 - AO353_16800 0.51 -0.2 3,721,247 - AO353_16800 0.51 +0.2 3,721,247 - AO353_16800 0.51 +1.2 3,721,247 - AO353_16800 0.51 -0.1 3,721,247 - AO353_16800 0.51 -0.9 3,721,247 - AO353_16800 0.51 -0.4 3,721,247 - AO353_16800 0.51 -1.4 3,721,247 - AO353_16800 0.51 +0.5 3,721,247 - AO353_16800 0.51 -1.6 3,721,320 - AO353_16800 0.65 -0.2 3,721,320 - AO353_16800 0.65 -0.3 3,721,320 - AO353_16800 0.65 -0.2 3,721,377 + AO353_16800 0.77 -1.4 3,721,377 + AO353_16800 0.77 -0.5 3,721,378 - AO353_16800 0.77 +0.1 3,721,461 + -0.2 3,721,461 + +1.0 3,721,461 + -0.8 3,721,461 + +1.2 3,721,461 + -1.2 3,721,461 + -0.5 3,721,462 - +0.4 3,721,462 - -0.3 3,721,462 - +0.2 3,721,462 - -0.5 3,721,463 + -0.5 3,721,463 + -1.5 3,721,463 + -0.4 3,721,464 - +0.0 3,721,464 - +0.5 3,721,464 - -1.6 3,721,530 + +0.8 3,721,555 + +0.9 3,721,562 + -0.3 3,721,562 + -0.5 3,721,562 + +1.0 3,721,562 + +0.3 3,721,575 + -1.0 3,721,658 - -0.4 3,721,658 - -1.1 3,721,767 - AO353_16805 0.18 +0.1 3,721,880 + AO353_16805 0.29 -0.8 3,721,880 + AO353_16805 0.29 +0.5 3,721,880 + AO353_16805 0.29 -0.5 3,721,880 + AO353_16805 0.29 -0.4 3,721,881 - AO353_16805 0.29 +0.5 3,721,881 - AO353_16805 0.29 -1.5 3,721,881 - AO353_16805 0.29 -0.2 3,721,881 - AO353_16805 0.29 +0.5
Or see this region's nucleotide sequence