Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_3103 and Pf1N1B4_3104 are separated by 155 nucleotides Pf1N1B4_3104 and Pf1N1B4_3105 are separated by 171 nucleotides Pf1N1B4_3105 and Pf1N1B4_3106 are separated by 56 nucleotides
Pf1N1B4_3103 - 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55), at 3,490,456 to 3,491,301
_3103
Pf1N1B4_3104 - Enolase (EC 4.2.1.11), at 3,491,457 to 3,492,746
_3104
Pf1N1B4_3105 - Cell division protein DivIC (FtsB), stabilizes FtsL against RasP cleavage, at 3,492,918 to 3,493,196
_3105
Pf1N1B4_3106 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60), at 3,493,253 to 3,493,900
_3106
Position (kb)
3491
3492
3493 Strain fitness (log2 ratio)
-1
0
1 at 3491.322 kb on + strand at 3491.322 kb on + strand at 3492.213 kb on + strand, within Pf1N1B4_3104 at 3492.228 kb on + strand, within Pf1N1B4_3104 at 3492.228 kb on + strand, within Pf1N1B4_3104 at 3492.669 kb on + strand at 3492.669 kb on + strand at 3492.669 kb on + strand at 3492.669 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.717 kb on + strand at 3492.751 kb on + strand at 3492.824 kb on + strand at 3492.824 kb on + strand at 3492.824 kb on + strand at 3493.198 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,491,322 + +0.4 3,491,322 + +0.7 3,492,213 + Pf1N1B4_3104 0.59 +1.4 3,492,228 + Pf1N1B4_3104 0.60 +0.6 3,492,228 + Pf1N1B4_3104 0.60 +0.1 3,492,669 + -0.4 3,492,669 + +0.4 3,492,669 + +1.5 3,492,669 + +0.4 3,492,717 + -1.3 3,492,717 + -1.5 3,492,717 + +1.1 3,492,717 + +0.1 3,492,717 + +0.9 3,492,717 + -0.2 3,492,717 + +0.6 3,492,751 + +0.4 3,492,824 + +0.1 3,492,824 + -0.7 3,492,824 + +0.1 3,493,198 + -1.5
Or see this region's nucleotide sequence