Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24620

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
6,000,215	-		CA265_RS24610	0.71	-0.1
6,000,278	+		CA265_RS24610	0.76	-1.0
6,000,279	-		CA265_RS24610	0.76	+1.5
6,000,326	+		CA265_RS24610	0.81	-0.8
6,000,378	-		CA265_RS24610	0.85	-0.3
6,000,378	-		CA265_RS24610	0.85	-0.2
6,000,444	-				-0.5
6,000,490	-				+0.1
6,000,490	-				+0.6
6,000,496	-				-0.9
6,000,573	-				+0.8
6,000,658	+		CA265_RS24615	0.16	-0.8
6,000,678	-		CA265_RS24615	0.21	-0.1
6,000,749	+		CA265_RS24615	0.41	-1.5
6,000,749	+		CA265_RS24615	0.41	-2.7
6,000,802	+		CA265_RS24615	0.56	-1.6
6,000,803	-		CA265_RS24615	0.56	-0.8
6,000,804	+		CA265_RS24615	0.57	-1.7
6,000,841	-		CA265_RS24615	0.67	-1.2
6,000,841	-		CA265_RS24615	0.67	+0.7
6,000,847	+		CA265_RS24615	0.69	-1.3
6,000,954	+				-1.8
6,000,954	+				-1.2
6,000,975	-				-1.3
6,000,981	-				+0.3
6,001,034	+				-1.0
6,001,060	+				+0.6
6,001,066	+				-0.4
6,001,069	+				-2.0
6,001,069	+				-0.9
6,001,069	+				-1.2
6,001,137	+				-0.3
6,001,145	+				-0.9
6,001,156	+				-1.6
6,001,156	+				-2.7
6,001,157	-				-0.1
6,001,167	+				-0.0
6,001,167	+				-1.6
6,001,281	+		CA265_RS24620	0.38	-1.6
6,001,281	+		CA265_RS24620	0.38	-2.8
6,001,282	-		CA265_RS24620	0.38	-1.5
6,001,282	-		CA265_RS24620	0.38	-0.4
6,001,283	+		CA265_RS24620	0.39	-2.6
6,001,284	-		CA265_RS24620	0.39	-1.3
6,001,314	+		CA265_RS24620	0.47	-2.5
6,001,354	-		CA265_RS24620	0.58	-1.8
6,001,403	+		CA265_RS24620	0.72	-1.5
6,001,407	+		CA265_RS24620	0.73	-2.3
6,001,408	-		CA265_RS24620	0.73	-2.0
6,001,408	-		CA265_RS24620	0.73	-2.0
6,001,558	-				-1.1
6,001,568	-				+0.2
6,001,572	-				-0.9
6,001,617	+				-1.0
6,001,637	+				-0.5
6,001,696	-				-1.4
6,001,697	-				+0.2
6,001,744	+				-1.7
6,001,745	-				-1.1
6,001,752	-				-0.3
6,001,753	+				-1.4
6,001,785	+				-0.3
6,001,805	+				+0.9
6,001,809	-				+0.2
6,001,877	+				+1.3
6,001,909	+		CA265_RS24625	0.11	+0.7
6,001,909	+		CA265_RS24625	0.11	+0.5
6,001,909	+		CA265_RS24625	0.11	+1.1
6,001,910	-		CA265_RS24625	0.11	+0.4
6,001,910	-		CA265_RS24625	0.11	+0.3
6,001,931	-		CA265_RS24625	0.13	+0.2
6,002,016	-		CA265_RS24625	0.22	+0.7
6,002,103	+		CA265_RS24625	0.30	+1.0
6,002,103	+		CA265_RS24625	0.30	+1.7
6,002,104	-		CA265_RS24625	0.30	+0.2
6,002,106	-		CA265_RS24625	0.30	+0.9
6,002,109	-		CA265_RS24625	0.31	+0.2
6,002,156	+		CA265_RS24625	0.35	+0.3
6,002,157	-		CA265_RS24625	0.36	+0.5
6,002,159	+		CA265_RS24625	0.36	+0.3
6,002,159	+		CA265_RS24625	0.36	+0.7
6,002,159	+		CA265_RS24625	0.36	-0.3
6,002,192	+		CA265_RS24625	0.39	+0.9
6,002,193	-		CA265_RS24625	0.39	+1.6
6,002,279	+		CA265_RS24625	0.48	+0.3
6,002,289	+		CA265_RS24625	0.49	+1.1
6,002,291	+		CA265_RS24625	0.49	+0.7
6,002,309	+		CA265_RS24625	0.50	+0.3
6,002,320	+		CA265_RS24625	0.52	+0.2
6,002,321	-		CA265_RS24625	0.52	+0.4
6,002,401	-		CA265_RS24625	0.60	+0.8
6,002,402	+		CA265_RS24625	0.60	+0.7
6,002,402	+		CA265_RS24625	0.60	+1.0
6,002,469	+		CA265_RS24625	0.66	-0.2
6,002,470	-		CA265_RS24625	0.66	+1.5
6,002,470	-		CA265_RS24625	0.66	+0.5