Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13390

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
3,335,511	-		CA265_RS13385	0.84	-0.7
3,335,515	+		CA265_RS13385	0.85	+0.7
3,335,516	-		CA265_RS13385	0.85	+0.2
3,335,593	-		CA265_RS13385	0.86	+0.4
3,335,636	+		CA265_RS13385	0.87	+0.4
3,335,637	-		CA265_RS13385	0.87	+0.2
3,335,637	-		CA265_RS13385	0.87	-0.7
3,335,662	+		CA265_RS13385	0.87	+0.2
3,335,662	+		CA265_RS13385	0.87	-0.1
3,335,664	+		CA265_RS13385	0.87	+0.9
3,335,668	+		CA265_RS13385	0.87	-0.9
3,335,690	-		CA265_RS13385	0.88	+0.7
3,335,696	-		CA265_RS13385	0.88	+1.6
3,335,700	+		CA265_RS13385	0.88	+0.7
3,335,701	-		CA265_RS13385	0.88	+0.2
3,335,916	+				-0.1
3,335,944	+				-1.4
3,335,987	-				+0.4
3,336,026	-				-0.9
3,336,031	-				+0.2
3,336,034	-				+1.4
3,336,082	+				+0.6
3,336,095	-				+1.0
3,336,095	-				-0.1
3,336,108	-				-0.4
3,336,121	-				-0.2
3,336,169	-				+0.2
3,336,169	-				+0.8
3,336,169	-				+0.9
3,336,291	-				+0.4
3,336,338	+				+0.2
3,336,350	+				+0.7
3,336,351	-				+2.4
3,336,486	-				+2.4
3,336,543	+				-0.3
3,336,543	+				-0.8
3,336,544	-				+1.8
3,336,582	-				+3.2
3,336,588	+				+0.5
3,336,588	+				+0.4
3,336,599	+				+0.3
3,336,600	-				+0.5
3,336,612	+		CA265_RS13390	0.10	+0.5
3,336,665	+		CA265_RS13390	0.15	-0.0
3,336,665	+		CA265_RS13390	0.15	-0.4
3,336,666	-		CA265_RS13390	0.15	+2.1
3,336,671	+		CA265_RS13390	0.15	+0.0
3,336,694	-		CA265_RS13390	0.17	+2.7
3,336,694	-		CA265_RS13390	0.17	+2.7
3,336,751	-		CA265_RS13390	0.22	+2.9
3,336,772	-		CA265_RS13390	0.24	+2.4
3,336,805	-		CA265_RS13390	0.27	+2.8
3,336,825	+		CA265_RS13390	0.29	-2.3
3,336,879	+		CA265_RS13390	0.33	-0.1
3,336,884	-		CA265_RS13390	0.34	+2.2
3,336,959	+		CA265_RS13390	0.40	-0.1
3,337,008	+		CA265_RS13390	0.44	+0.1
3,337,008	+		CA265_RS13390	0.44	-0.6
3,337,008	+		CA265_RS13390	0.44	+0.2
3,337,008	+		CA265_RS13390	0.44	-0.1
3,337,009	-		CA265_RS13390	0.44	+0.8
3,337,046	-		CA265_RS13390	0.48	+3.0
3,337,078	-		CA265_RS13390	0.50	+1.5
3,337,078	-		CA265_RS13390	0.50	+1.9
3,337,202	+		CA265_RS13390	0.61	+0.7
3,337,203	-		CA265_RS13390	0.61	+2.5
3,337,206	+		CA265_RS13390	0.61	-0.7
3,337,362	+		CA265_RS13390	0.75	+0.0
3,337,363	-		CA265_RS13390	0.75	+0.9
3,337,363	-		CA265_RS13390	0.75	+1.4
3,337,363	-		CA265_RS13390	0.75	+1.3
3,337,395	-		CA265_RS13390	0.77	+2.2
3,337,612	-				+1.3
3,337,691	-				+2.2
3,337,707	-				+2.2
3,337,707	-				+2.4
3,337,724	+				-2.8
3,337,736	-				+3.1
3,337,876	+				+1.7
3,337,903	+				+0.7
3,337,912	-				+1.3
3,337,974	+				-0.8
3,338,009	-				+0.7
3,338,061	-				+0.1
3,338,061	-				+1.5
3,338,063	-				+1.0
3,338,072	-				+1.0
3,338,139	+				-0.0
3,338,144	+				+0.3
3,338,173	-				+0.4
3,338,221	+				+0.3
3,338,221	+				-0.5
3,338,296	+				+0.1
3,338,333	-				+1.0
3,338,425	+				+0.8
3,338,425	+				+1.2
3,338,428	+				+0.7
3,338,460	-		CA265_RS13395	0.10	+1.2
3,338,460	-		CA265_RS13395	0.10	+1.7
3,338,470	+		CA265_RS13395	0.13	+2.2
3,338,470	+		CA265_RS13395	0.13	+0.2
3,338,487	+		CA265_RS13395	0.18	-0.8
3,338,492	+		CA265_RS13395	0.19	-0.3
3,338,503	+		CA265_RS13395	0.22	-0.7
3,338,503	+		CA265_RS13395	0.22	-0.1
3,338,503	+		CA265_RS13395	0.22	-1.0
3,338,503	+		CA265_RS13395	0.22	-0.1
3,338,503	+		CA265_RS13395	0.22	-0.2
3,338,504	-		CA265_RS13395	0.22	+0.4
3,338,504	-		CA265_RS13395	0.22	-0.5
3,338,504	-		CA265_RS13395	0.22	-0.4
3,338,586	-		CA265_RS13395	0.45	-0.8
3,338,603	+		CA265_RS13395	0.50	-0.2
3,338,603	+		CA265_RS13395	0.50	-0.3
3,338,616	-		CA265_RS13395	0.54	+0.4
3,338,640	+		CA265_RS13395	0.61	+0.3