Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08340

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
2,065,891	-		CA265_RS08335	0.44	+0.5
2,065,892	+		CA265_RS08335	0.44	-0.1
2,066,002	-		CA265_RS08335	0.53	+1.4
2,066,027	+		CA265_RS08335	0.55	-0.2
2,066,098	+		CA265_RS08335	0.61	-1.1
2,066,099	-		CA265_RS08335	0.61	+1.1
2,066,103	+		CA265_RS08335	0.62	-0.0
2,066,103	+		CA265_RS08335	0.62	+0.1
2,066,104	-		CA265_RS08335	0.62	+0.6
2,066,135	+		CA265_RS08335	0.64	+0.5
2,066,164	+		CA265_RS08335	0.67	+1.3
2,066,165	-		CA265_RS08335	0.67	-0.5
2,066,174	-		CA265_RS08335	0.68	+0.7
2,066,187	+		CA265_RS08335	0.69	+0.2
2,066,188	-		CA265_RS08335	0.69	+0.0
2,066,202	+		CA265_RS08335	0.70	-0.2
2,066,206	+		CA265_RS08335	0.71	+0.3
2,066,211	+				+0.1
2,066,230	-		CA265_RS08335	0.73	-1.1
2,066,350	-		CA265_RS08335	0.83	+1.6
2,066,365	+		CA265_RS08335	0.84	+0.9
2,066,379	+		CA265_RS08335	0.85	+2.1
2,066,389	-		CA265_RS08335	0.86	-0.1
2,066,533	+				-0.2
2,066,534	-				+0.1
2,066,535	+				+0.1
2,066,634	+				-0.5
2,066,641	+				+1.4
2,066,641	+				-0.4
2,066,645	+				+0.3
2,066,697	+				-0.1
2,066,753	+				+1.0
2,066,756	+				+0.4
2,066,830	-				+1.9
2,066,882	+				+0.1
2,066,951	+		CA265_RS08340	0.17	-1.3
2,066,951	+		CA265_RS08340	0.17	+0.2
2,066,952	-		CA265_RS08340	0.17	+1.4
2,066,984	-		CA265_RS08340	0.21	-0.8
2,067,060	+		CA265_RS08340	0.31	+0.0
2,067,218	+		CA265_RS08340	0.50	+2.4
2,067,219	-		CA265_RS08340	0.50	+0.8
2,067,226	+		CA265_RS08340	0.51	+0.2
2,067,227	-		CA265_RS08340	0.51	+0.1
2,067,229	+		CA265_RS08340	0.51	-0.3
2,067,240	-		CA265_RS08340	0.52	+0.2
2,067,291	+		CA265_RS08340	0.59	-0.5
2,067,319	-		CA265_RS08340	0.62	+1.4
2,067,319	-		CA265_RS08340	0.62	+0.2
2,067,489	+		CA265_RS08340	0.83	-0.7
2,067,498	+		CA265_RS08340	0.84	+0.2
2,067,515	+		CA265_RS08340	0.86	+1.2
2,067,613	+				-0.3
2,067,622	-				+1.4
2,067,630	+				-1.2
2,067,654	-				-0.3
2,067,755	+		CA265_RS08345	0.35	-0.8
2,067,830	+		CA265_RS08345	0.57	-0.7
2,067,866	-		CA265_RS08345	0.68	-0.5
2,067,869	-		CA265_RS08345	0.69	-0.4
2,067,869	-		CA265_RS08345	0.69	+0.8
2,067,911	-		CA265_RS08345	0.82	+0.4
2,067,960	+				-0.4
2,067,973	+				-0.1
2,067,985	+				+2.4
2,068,011	-				+0.7
2,068,011	-				+0.6
2,068,029	+				+0.3
2,068,030	-				+0.3
2,068,053	+				-1.7
2,068,080	+		CA265_RS08350	0.13	+0.4
2,068,080	+		CA265_RS08350	0.13	-0.0
2,068,114	-		CA265_RS08350	0.17	-0.1
2,068,151	-		CA265_RS08350	0.21	-0.1
2,068,151	-		CA265_RS08350	0.21	-0.8
2,068,193	+		CA265_RS08350	0.26	-0.1
2,068,194	-		CA265_RS08350	0.26	+1.0
2,068,274	+		CA265_RS08350	0.35	+0.8
2,068,275	-		CA265_RS08350	0.35	+0.8
2,068,275	-		CA265_RS08350	0.35	+0.7
2,068,358	+		CA265_RS08350	0.45	+0.1
2,068,395	+		CA265_RS08350	0.49	+0.5
2,068,417	+		CA265_RS08350	0.52	-0.1
2,068,417	+		CA265_RS08350	0.52	+0.3
2,068,417	+		CA265_RS08350	0.52	-0.1
2,068,418	-		CA265_RS08350	0.52	+0.2
2,068,418	-		CA265_RS08350	0.52	+0.6
2,068,418	-		CA265_RS08350	0.52	+0.6
2,068,587	-		CA265_RS08350	0.72	+1.6
2,068,600	-		CA265_RS08350	0.73	-0.1