Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05050

Experiment: R2A with Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Vancomycin 0.06 mg/ml
1,199,422	-		CA265_RS05045	0.72	-0.5
1,199,424	+		CA265_RS05045	0.72	-2.8
1,199,425	-		CA265_RS05045	0.72	-0.0
1,199,525	+		CA265_RS05045	0.76	+0.1
1,199,539	+		CA265_RS05045	0.76	-0.4
1,199,548	+		CA265_RS05045	0.76	-0.5
1,199,548	+		CA265_RS05045	0.76	-1.1
1,199,548	+		CA265_RS05045	0.76	-0.8
1,199,549	-		CA265_RS05045	0.76	+0.3
1,199,549	-		CA265_RS05045	0.76	+0.5
1,199,550	+		CA265_RS05045	0.76	-0.7
1,199,574	+		CA265_RS05045	0.77	-0.3
1,199,574	+		CA265_RS05045	0.77	-0.6
1,199,758	+		CA265_RS05045	0.83	-0.1
1,199,775	+		CA265_RS05045	0.83	-0.5
1,199,783	-		CA265_RS05045	0.84	-1.0
1,199,806	-				+3.3
1,199,807	+		CA265_RS05045	0.84	-0.6
1,199,830	+		CA265_RS05045	0.85	-0.4
1,199,830	+		CA265_RS05045	0.85	-0.6
1,199,831	-		CA265_RS05045	0.85	-0.2
1,199,831	-		CA265_RS05045	0.85	-0.1
1,199,835	-		CA265_RS05045	0.85	+3.0
1,199,840	+		CA265_RS05045	0.85	+0.4
1,199,849	-		CA265_RS05045	0.86	+0.7
1,199,849	-		CA265_RS05045	0.86	-1.8
1,199,867	-		CA265_RS05045	0.86	+0.4
1,199,899	-		CA265_RS05045	0.87	+0.6
1,199,899	-		CA265_RS05045	0.87	-1.1
1,199,899	-		CA265_RS05045	0.87	-1.0
1,199,899	-		CA265_RS05045	0.87	+0.7
1,199,899	-		CA265_RS05045	0.87	-0.0
1,199,899	-		CA265_RS05045	0.87	+0.3
1,199,899	-		CA265_RS05045	0.87	-0.3
1,199,902	+		CA265_RS05045	0.87	-0.4
1,199,902	+		CA265_RS05045	0.87	-1.4
1,200,014	-				-0.4
1,200,089	+				+0.3
1,200,131	+				-0.8
1,200,132	-				+0.3
1,200,154	+				-1.0
1,200,155	-				-0.7
1,200,155	-				-0.0
1,200,163	+				-0.5
1,200,170	-				-0.2
1,200,278	+				-0.3
1,200,278	+				+0.3
1,200,411	-				-0.8
1,200,411	-				+0.1
1,200,489	+		CA265_RS05050	0.14	-0.6
1,200,552	-		CA265_RS05050	0.18	+0.0
1,200,639	-		CA265_RS05050	0.24	+0.9
1,200,836	-				+0.3
1,200,839	-		CA265_RS05050	0.39	-0.1
1,200,839	-		CA265_RS05050	0.39	-0.5
1,201,043	+		CA265_RS05050	0.53	-0.9
1,201,121	+				+0.7
1,201,168	-		CA265_RS05050	0.62	+0.3
1,201,230	-		CA265_RS05050	0.66	+1.7
1,201,230	-		CA265_RS05050	0.66	+0.7
1,201,298	+		CA265_RS05050	0.71	+0.4
1,201,473	-				+0.7
1,201,481	+		CA265_RS05050	0.84	-1.4
1,201,492	+		CA265_RS05050	0.85	+0.2
1,201,493	-		CA265_RS05050	0.85	-0.6
1,201,523	+		CA265_RS05050	0.87	+1.0
1,201,567	-				+0.4
1,201,573	-				-0.3
1,201,573	-				-0.2
1,201,573	-				-1.7
1,201,576	+				-0.8
1,201,639	-				+0.4
1,201,652	+				-0.7
1,201,706	+				-0.1
1,201,714	-				-0.3
1,201,716	-				+0.3
1,201,718	-				-0.2
1,201,718	-				+0.3
1,201,718	-				-2.2
1,201,728	-				-0.7
1,201,758	+				-0.2
1,201,764	+				-0.6
1,201,865	-				-0.3
1,201,865	-				+0.0
1,201,915	+				+0.2
1,202,007	+				+0.4
1,202,007	+				+0.3
1,202,007	+				-1.0
1,202,009	+				+0.2
1,202,009	+				+0.5
1,202,014	+				-0.2
1,202,075	-				+0.3
1,202,141	-				+0.1
1,202,324	-				-1.5
1,202,379	-				+0.1
1,202,449	-				+1.2
1,202,449	-				+0.4
1,202,450	+				-0.1
1,202,450	+				+0.1
1,202,486	-				+0.3
1,202,670	+				-0.4