Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS25025 and CA265_RS25030 are separated by 466 nucleotides CA265_RS25030 and CA265_RS25035 are separated by 145 nucleotides
CA265_RS25025: CA265_RS25025 - N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA, at 6,094,340 to 6,095,488
_RS25025
CA265_RS25030: CA265_RS25030 - hypothetical protein, at 6,095,955 to 6,096,218
_RS25030
CA265_RS25035: CA265_RS25035 - molecular chaperone DnaJ, at 6,096,364 to 6,096,810
_RS25035
Position (kb)
6095
6096
6097 Strain fitness (log2 ratio)
-2
-1
0
1 at 6095.443 kb on + strand at 6095.443 kb on + strand at 6095.558 kb on + strand at 6095.558 kb on + strand at 6095.558 kb on + strand at 6095.559 kb on - strand at 6095.559 kb on - strand at 6095.615 kb on - strand at 6095.615 kb on - strand at 6095.628 kb on - strand at 6095.684 kb on + strand at 6095.684 kb on + strand at 6095.706 kb on + strand at 6095.735 kb on - strand at 6095.790 kb on - strand at 6095.791 kb on + strand at 6095.846 kb on + strand at 6095.879 kb on + strand at 6095.880 kb on - strand at 6095.883 kb on - strand at 6095.937 kb on + strand at 6095.937 kb on + strand at 6095.964 kb on - strand at 6096.041 kb on - strand, within CA265_RS25030 at 6096.041 kb on - strand, within CA265_RS25030 at 6096.155 kb on - strand, within CA265_RS25030 at 6096.155 kb on - strand, within CA265_RS25030 at 6096.214 kb on - strand at 6096.214 kb on - strand at 6096.238 kb on + strand at 6096.315 kb on - strand at 6096.375 kb on - strand at 6096.383 kb on - strand at 6096.429 kb on + strand at 6096.430 kb on - strand, within CA265_RS25035 at 6096.498 kb on - strand, within CA265_RS25035 at 6096.498 kb on - strand, within CA265_RS25035 at 6096.516 kb on + strand, within CA265_RS25035 at 6096.552 kb on + strand, within CA265_RS25035 at 6096.553 kb on - strand, within CA265_RS25035 at 6096.553 kb on - strand, within CA265_RS25035 at 6096.589 kb on + strand, within CA265_RS25035 at 6096.592 kb on - strand, within CA265_RS25035 at 6096.652 kb on - strand, within CA265_RS25035 at 6096.677 kb on - strand, within CA265_RS25035 at 6096.677 kb on - strand, within CA265_RS25035 at 6096.721 kb on - strand, within CA265_RS25035 at 6096.767 kb on - strand at 6096.781 kb on - strand at 6096.829 kb on + strand at 6096.829 kb on + strand at 6096.882 kb on + strand at 6096.911 kb on - strand at 6096.913 kb on - strand at 6096.968 kb on + strand at 6097.010 kb on + strand at 6097.031 kb on + strand at 6097.031 kb on + strand at 6097.031 kb on + strand at 6097.087 kb on + strand at 6097.160 kb on + strand at 6097.160 kb on + strand at 6097.160 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Dimethyl Sulfoxide 7.5 vol% remove 6,095,443 + +1.3 6,095,443 + -0.4 6,095,558 + -0.1 6,095,558 + -0.0 6,095,558 + -0.1 6,095,559 - +0.0 6,095,559 - -1.4 6,095,615 - -0.3 6,095,615 - -1.3 6,095,628 - +0.7 6,095,684 + -0.7 6,095,684 + +0.1 6,095,706 + -0.6 6,095,735 - +0.0 6,095,790 - -1.2 6,095,791 + -2.0 6,095,846 + -0.6 6,095,879 + +0.6 6,095,880 - +1.1 6,095,883 - -0.1 6,095,937 + -1.0 6,095,937 + +1.5 6,095,964 - +0.3 6,096,041 - CA265_RS25030 0.33 -0.3 6,096,041 - CA265_RS25030 0.33 -0.4 6,096,155 - CA265_RS25030 0.76 -0.4 6,096,155 - CA265_RS25030 0.76 -1.5 6,096,214 - +0.1 6,096,214 - -2.1 6,096,238 + +0.2 6,096,315 - +0.3 6,096,375 - -0.3 6,096,383 - -0.3 6,096,429 + +0.5 6,096,430 - CA265_RS25035 0.15 -1.2 6,096,498 - CA265_RS25035 0.30 -0.2 6,096,498 - CA265_RS25035 0.30 +0.8 6,096,516 + CA265_RS25035 0.34 -0.6 6,096,552 + CA265_RS25035 0.42 +0.4 6,096,553 - CA265_RS25035 0.42 -1.1 6,096,553 - CA265_RS25035 0.42 +0.1 6,096,589 + CA265_RS25035 0.50 -0.2 6,096,592 - CA265_RS25035 0.51 +0.6 6,096,652 - CA265_RS25035 0.64 -0.4 6,096,677 - CA265_RS25035 0.70 -0.3 6,096,677 - CA265_RS25035 0.70 -0.2 6,096,721 - CA265_RS25035 0.80 -0.5 6,096,767 - +0.5 6,096,781 - +1.2 6,096,829 + +0.1 6,096,829 + -0.7 6,096,882 + -0.5 6,096,911 - +1.0 6,096,913 - +0.4 6,096,968 + +1.2 6,097,010 + -0.3 6,097,031 + +0.0 6,097,031 + -0.6 6,097,031 + -0.4 6,097,087 + -0.4 6,097,160 + +0.1 6,097,160 + +0.3 6,097,160 + +0.0
Or see this region's nucleotide sequence