Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07545

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
1,897,717	+				-0.3
1,897,723	+				-0.3
1,897,724	-				-0.0
1,897,756	+				+0.0
1,897,756	+				-0.1
1,897,757	-				-0.4
1,897,757	-				+1.7
1,897,757	-				+0.0
1,897,761	-				+0.2
1,897,761	-				+0.8
1,897,761	-				+0.2
1,897,777	+				+1.2
1,897,816	-				-0.5
1,897,892	+		CA265_RS07535	0.11	-1.0
1,898,013	+				+2.1
1,898,042	+		CA265_RS07535	0.45	-0.1
1,898,105	+		CA265_RS07535	0.60	-0.4
1,898,106	-		CA265_RS07535	0.60	+0.8
1,898,262	+				-0.3
1,898,262	+				-0.5
1,898,329	-		CA265_RS07540	0.14	-1.2
1,898,402	+		CA265_RS07540	0.37	-0.7
1,898,403	-		CA265_RS07540	0.38	-1.5
1,898,403	-		CA265_RS07540	0.38	-0.5
1,898,403	-		CA265_RS07540	0.38	-0.1
1,898,528	+		CA265_RS07540	0.77	-0.3
1,898,564	+		CA265_RS07540	0.88	-0.2
1,898,640	-				+0.9
1,898,683	-				-3.0
1,898,694	+				+0.7
1,898,695	-				-0.0
1,898,717	+				-0.2
1,898,767	+		CA265_RS07545	0.19	-0.5
1,898,785	+		CA265_RS07545	0.23	-1.0
1,898,880	+		CA265_RS07545	0.46	-0.1
1,899,015	+		CA265_RS07545	0.78	+0.6
1,899,015	+		CA265_RS07545	0.78	-1.2
1,899,016	-		CA265_RS07545	0.79	+0.1
1,899,016	-		CA265_RS07545	0.79	-1.0
1,899,063	-				-0.2
1,899,085	-				-0.2
1,899,128	+				-0.5
1,899,154	+				+1.2
1,899,199	-				+1.3
1,899,199	-				+0.0
1,899,208	+				+1.1
1,899,218	+				-0.3
1,899,218	+				-0.9
1,899,248	+				-1.5
1,899,268	+				+0.5
1,899,285	+				-0.4
1,899,302	-				-0.5
1,899,302	-				-0.7
1,899,312	-				+1.4
1,899,317	+				-0.1
1,899,321	+				+0.0
1,899,326	-				+0.7
1,899,355	-				-1.1
1,899,406	+				+1.1
1,899,439	+		CA265_RS07550	0.12	+0.3
1,899,491	+		CA265_RS07550	0.28	+0.1
1,899,491	+		CA265_RS07550	0.28	-0.1
1,899,492	-		CA265_RS07550	0.28	-0.0
1,899,542	+		CA265_RS07550	0.43	-0.8
1,899,623	+		CA265_RS07550	0.67	+0.1
1,899,701	+				+0.0
1,899,701	+				-0.2
1,899,714	-				+0.2
1,899,714	-				-1.0
1,899,716	-				-0.2
1,899,766	-				-0.0
1,899,805	+		CA265_RS07555	0.14	-1.2
1,899,856	-		CA265_RS07555	0.25	+0.8
1,899,877	+		CA265_RS07555	0.29	+0.6
1,899,877	+		CA265_RS07555	0.29	-0.1
1,899,932	+		CA265_RS07555	0.41	-0.1
1,899,933	-		CA265_RS07555	0.42	-1.8
1,899,933	-		CA265_RS07555	0.42	-0.2
1,899,946	-		CA265_RS07555	0.44	+0.2
1,899,949	-		CA265_RS07555	0.45	-0.2
1,899,949	-		CA265_RS07555	0.45	+0.7
1,899,960	-		CA265_RS07555	0.47	-0.4
1,899,960	-		CA265_RS07555	0.47	-0.1
1,899,962	-		CA265_RS07555	0.48	+0.4
1,899,962	-		CA265_RS07555	0.48	-0.0
1,899,962	-		CA265_RS07555	0.48	+0.1
1,900,044	-		CA265_RS07555	0.66	-0.4
1,900,044	-		CA265_RS07555	0.66	+0.2
1,900,084	-		CA265_RS07555	0.75	+0.1