Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02545 and CA265_RS02550 are separated by 246 nucleotides CA265_RS02550 and CA265_RS02555 are separated by 59 nucleotides CA265_RS02555 and CA265_RS02560 are separated by 320 nucleotides
CA265_RS02545: CA265_RS02545 - hypothetical protein, at 638,679 to 641,642
_RS02545
CA265_RS02550: CA265_RS02550 - tRNA-Phe, at 641,889 to 641,961
_RS02550
CA265_RS02555: CA265_RS02555 - ATPase, at 642,021 to 642,470
_RS02555
CA265_RS02560: CA265_RS02560 - hypothetical protein, at 642,791 to 644,398
_RS02560
Position (kb) 641
642 Strain fitness (log2 ratio) -2
-1
0
1 at 640.941 kb on - strand, within CA265_RS02545 at 641.014 kb on + strand, within CA265_RS02545 at 641.087 kb on + strand, within CA265_RS02545 at 641.090 kb on + strand, within CA265_RS02545 at 641.237 kb on + strand, within CA265_RS02545 at 641.243 kb on + strand, within CA265_RS02545 at 641.244 kb on - strand, within CA265_RS02545 at 641.294 kb on + strand, within CA265_RS02545 at 641.462 kb on + strand at 641.468 kb on - strand at 641.505 kb on + strand at 641.505 kb on + strand at 641.506 kb on - strand at 641.584 kb on + strand at 641.589 kb on - strand at 641.589 kb on - strand at 641.696 kb on - strand at 641.696 kb on - strand at 641.696 kb on - strand at 641.743 kb on - strand at 641.743 kb on - strand at 641.867 kb on + strand at 641.897 kb on - strand, within CA265_RS02550 at 641.964 kb on + strand at 641.981 kb on - strand at 642.018 kb on + strand at 642.030 kb on + strand at 642.037 kb on + strand at 642.037 kb on + strand at 642.071 kb on + strand, within CA265_RS02555 at 642.208 kb on - strand, within CA265_RS02555 at 642.228 kb on + strand, within CA265_RS02555 at 642.386 kb on + strand, within CA265_RS02555 at 642.387 kb on - strand, within CA265_RS02555 at 642.391 kb on + strand, within CA265_RS02555 at 642.453 kb on - strand at 642.498 kb on + strand at 642.499 kb on - strand at 642.504 kb on + strand at 642.554 kb on + strand at 642.555 kb on - strand at 642.598 kb on - strand at 642.602 kb on - strand at 642.602 kb on - strand at 642.672 kb on + strand at 642.744 kb on - strand at 642.762 kb on - strand at 642.775 kb on + strand at 642.788 kb on + strand at 642.800 kb on - strand at 642.834 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Dimethyl Sulfoxide 7.5 vol% remove 640,941 - CA265_RS02545 0.76 +0.6 641,014 + CA265_RS02545 0.79 +0.4 641,087 + CA265_RS02545 0.81 -0.2 641,090 + CA265_RS02545 0.81 -0.5 641,237 + CA265_RS02545 0.86 -0.2 641,243 + CA265_RS02545 0.87 +0.2 641,244 - CA265_RS02545 0.87 +0.5 641,294 + CA265_RS02545 0.88 +0.1 641,462 + +0.0 641,468 - -0.4 641,505 + +0.7 641,505 + -1.0 641,506 - +1.3 641,584 + -0.1 641,589 - +0.3 641,589 - -0.3 641,696 - +0.4 641,696 - +1.3 641,696 - +0.0 641,743 - -0.4 641,743 - -0.0 641,867 + -0.0 641,897 - CA265_RS02550 0.11 -0.5 641,964 + -0.9 641,981 - +0.2 642,018 + +0.1 642,030 + +0.0 642,037 + -0.6 642,037 + +1.3 642,071 + CA265_RS02555 0.11 -0.0 642,208 - CA265_RS02555 0.42 -0.8 642,228 + CA265_RS02555 0.46 -0.2 642,386 + CA265_RS02555 0.81 -2.2 642,387 - CA265_RS02555 0.81 +0.1 642,391 + CA265_RS02555 0.82 +0.8 642,453 - +0.6 642,498 + -0.4 642,499 - -1.9 642,504 + -1.7 642,554 + +0.5 642,555 - -0.2 642,598 - -0.2 642,602 - -0.5 642,602 - -0.6 642,672 + +0.2 642,744 - -0.1 642,762 - -0.7 642,775 + +0.3 642,788 + +0.1 642,800 - -0.1 642,834 + -0.3
Or see this region's nucleotide sequence