Experiment: Thallium(I) acetate 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0862 and Shew_0863 are separated by 1 nucleotides Shew_0863 and Shew_0864 are separated by 186 nucleotides
Shew_0862: Shew_0862 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 982,914 to 984,545
_0862
Shew_0863: Shew_0863 - ABC transporter-related protein (RefSeq), at 984,547 to 985,575
_0863
Shew_0864: Shew_0864 - Dyp-type peroxidase family protein (RefSeq), at 985,762 to 986,706
_0864
Position (kb) 984
985
986 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 983.860 kb on + strand, within Shew_0862 at 984.130 kb on + strand, within Shew_0862 at 984.223 kb on + strand, within Shew_0862 at 984.560 kb on + strand at 984.608 kb on + strand at 984.616 kb on - strand at 984.902 kb on - strand, within Shew_0863 at 984.951 kb on - strand, within Shew_0863 at 985.096 kb on - strand, within Shew_0863 at 985.096 kb on - strand, within Shew_0863 at 985.170 kb on + strand, within Shew_0863 at 985.192 kb on + strand, within Shew_0863 at 985.212 kb on + strand, within Shew_0863 at 985.282 kb on - strand, within Shew_0863 at 985.321 kb on + strand, within Shew_0863 at 985.421 kb on - strand, within Shew_0863 at 985.424 kb on + strand, within Shew_0863 at 985.430 kb on - strand, within Shew_0863 at 985.569 kb on + strand at 985.577 kb on - strand at 985.577 kb on - strand at 985.740 kb on - strand at 985.784 kb on + strand at 986.004 kb on + strand, within Shew_0864
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 10 mg/ml remove 983,860 + Shew_0862 0.58 +0.2 984,130 + Shew_0862 0.75 +0.5 984,223 + Shew_0862 0.80 +0.2 984,560 + +1.3 984,608 + +0.7 984,616 - -1.4 984,902 - Shew_0863 0.34 +0.2 984,951 - Shew_0863 0.39 -0.3 985,096 - Shew_0863 0.53 +0.7 985,096 - Shew_0863 0.53 -0.5 985,170 + Shew_0863 0.61 -0.3 985,192 + Shew_0863 0.63 +0.4 985,212 + Shew_0863 0.65 -0.1 985,282 - Shew_0863 0.71 -0.5 985,321 + Shew_0863 0.75 -0.0 985,421 - Shew_0863 0.85 +0.5 985,424 + Shew_0863 0.85 -3.2 985,430 - Shew_0863 0.86 +0.6 985,569 + -1.8 985,577 - +0.5 985,577 - +0.0 985,740 - -2.4 985,784 + -1.4 986,004 + Shew_0864 0.26 -2.0
Or see this region's nucleotide sequence