Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12675

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,159,276	+				+0.2
3,159,289	+				+0.6
3,159,333	+				+0.2
3,159,334	-				-0.5
3,159,356	+				+0.7
3,159,476	+		CA265_RS12670	0.13	-0.0
3,159,520	+		CA265_RS12670	0.28	-0.7
3,159,521	-		CA265_RS12670	0.29	+0.4
3,159,527	+		CA265_RS12670	0.31	+0.3
3,159,597	+		CA265_RS12670	0.55	-1.2
3,159,599	+		CA265_RS12670	0.55	-0.1
3,159,751	+				-0.6
3,159,757	-				+0.7
3,159,856	+				-0.4
3,159,912	+				-0.3
3,159,913	-				+0.1
3,159,960	-				-0.1
3,160,017	-				-0.0
3,160,055	+				-0.5
3,160,058	+				+0.4
3,160,065	+				+0.7
3,160,129	-				+0.4
3,160,132	+				-0.3
3,160,149	-				-0.1
3,160,151	-				-0.5
3,160,153	+				-0.7
3,160,153	+				-1.9
3,160,201	+		CA265_RS12675	0.25	-0.6
3,160,205	+		CA265_RS12675	0.28	-0.3
3,160,206	-		CA265_RS12675	0.29	-0.8
3,160,281	-		CA265_RS12675	0.83	-0.0
3,160,293	+				-0.1
3,160,312	+				-0.5
3,160,368	+				-1.6
3,160,372	+				-0.2
3,160,390	+				-1.4
3,160,499	+				-0.0
3,160,500	-				-0.6
3,160,503	-				-0.1
3,160,503	-				-1.3
3,160,536	-				-0.2
3,160,536	-				+0.1
3,160,653	-		CA265_RS12680	0.17	-0.3
3,160,656	+		CA265_RS12680	0.17	+0.5
3,160,683	+		CA265_RS12680	0.20	+0.7
3,160,692	+		CA265_RS12680	0.21	+0.0
3,160,699	+		CA265_RS12680	0.22	+0.4
3,160,700	-		CA265_RS12680	0.22	-0.5
3,160,767	+		CA265_RS12680	0.30	-1.5
3,160,959	-		CA265_RS12680	0.51	+0.1
3,161,004	+		CA265_RS12680	0.56	-0.5
3,161,004	+		CA265_RS12680	0.56	+0.3
3,161,166	+		CA265_RS12680	0.75	+0.7
3,161,168	+		CA265_RS12680	0.75	-0.2
3,161,169	-		CA265_RS12680	0.75	-0.3
3,161,169	-		CA265_RS12680	0.75	-0.5
3,161,191	-		CA265_RS12680	0.77	+0.1
3,161,209	-		CA265_RS12680	0.79	-0.5
3,161,274	+		CA265_RS12680	0.87	+0.5
3,161,297	-		CA265_RS12680	0.89	+0.7
3,161,297	-		CA265_RS12680	0.89	+0.2