Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25350

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
5,589,778	+		AO353_25345	0.55	-0.2
5,589,779	-		AO353_25345	0.55	-0.9
5,589,862	+		AO353_25345	0.60	-1.3
5,589,863	-		AO353_25345	0.60	-0.6
5,590,033	+		AO353_25345	0.71	-0.9
5,590,033	+		AO353_25345	0.71	-0.5
5,590,033	+		AO353_25345	0.71	+1.5
5,590,033	+		AO353_25345	0.71	+0.4
5,590,034	-		AO353_25345	0.71	-0.9
5,590,034	-		AO353_25345	0.71	-0.3
5,590,034	-		AO353_25345	0.71	-0.1
5,590,037	+				+1.5
5,590,037	+		AO353_25345	0.71	+0.2
5,590,038	-		AO353_25345	0.71	-1.4
5,590,038	-		AO353_25345	0.71	-1.5
5,590,112	-		AO353_25345	0.75	+0.1
5,590,112	-		AO353_25345	0.75	-1.1
5,590,123	+				+0.5
5,590,123	+		AO353_25345	0.76	+0.6
5,590,123	+		AO353_25345	0.76	-1.3
5,590,123	+		AO353_25345	0.76	+0.5
5,590,123	+		AO353_25345	0.76	+0.1
5,590,123	+		AO353_25345	0.76	+0.1
5,590,124	-		AO353_25345	0.76	-1.1
5,590,124	-		AO353_25345	0.76	+0.0
5,590,124	-		AO353_25345	0.76	-0.8
5,590,124	-		AO353_25345	0.76	+0.6
5,590,127	+		AO353_25345	0.76	-0.9
5,590,127	+		AO353_25345	0.76	-0.5
5,590,127	+		AO353_25345	0.76	+0.9
5,590,127	+		AO353_25345	0.76	-1.2
5,590,215	-		AO353_25345	0.82	-2.4
5,590,277	+		AO353_25345	0.85	-1.1
5,590,277	+		AO353_25345	0.85	-0.1
5,590,278	-		AO353_25345	0.85	-0.5
5,590,278	-		AO353_25345	0.85	+0.1
5,590,544	+				+1.5
5,590,544	+				+1.5
5,590,545	-				-0.9
5,590,545	-				-1.0
5,590,545	-				+0.0
5,590,545	-				+0.8
5,590,554	+				-0.7
5,590,554	+				+1.5
5,590,554	+				-2.2
5,590,555	-				-2.0
5,590,555	-				-1.9
5,590,555	-				+0.5
5,590,555	-				-0.3
5,590,559	+				+0.4
5,590,559	+				+0.1
5,590,559	+				-1.0
5,590,560	-				-1.1
5,590,560	-				-0.2
5,590,650	+				-1.5
5,590,698	+				-2.6
5,590,698	+				-0.0
5,590,698	+				-0.7
5,590,698	+				-0.7
5,590,698	+				-0.2
5,590,699	-				-0.2
5,590,705	+				-0.7
5,590,706	-				+0.2
5,590,706	-				-1.0
5,590,741	+				-1.7
5,590,742	-				-1.5
5,590,742	-				-1.1
5,590,742	-				-0.3
5,590,772	+				-2.0
5,590,772	+				+0.5
5,590,772	+				+0.9
5,590,772	+				-0.7
5,590,773	-				-0.1
5,590,773	-				-1.1
5,590,773	-				-0.1
5,590,773	-				-0.6
5,590,799	+				+0.5
5,590,800	-				-0.7
5,590,977	-		AO353_25350	0.24	+0.9
5,591,032	+		AO353_25350	0.30	-1.1
5,591,283	+		AO353_25350	0.56	+0.7
5,591,283	+		AO353_25350	0.56	+0.7
5,591,284	-		AO353_25350	0.56	-0.1
5,591,284	-		AO353_25350	0.56	+0.5
5,591,284	-		AO353_25350	0.56	-0.5
5,591,284	-		AO353_25350	0.56	+0.2
5,591,298	+		AO353_25350	0.57	-0.6
5,591,298	+		AO353_25350	0.57	-1.1
5,591,299	-		AO353_25350	0.57	-0.9
5,591,299	-		AO353_25350	0.57	+1.9
5,591,299	-		AO353_25350	0.57	+1.0
5,591,299	-		AO353_25350	0.57	-1.1
5,591,299	-		AO353_25350	0.57	+1.5
5,591,308	+		AO353_25350	0.58	+0.3
5,591,308	+		AO353_25350	0.58	-0.6
5,591,316	+		AO353_25350	0.59	+0.1
5,591,316	+		AO353_25350	0.59	+1.2
5,591,316	+		AO353_25350	0.59	+0.7
5,591,316	+		AO353_25350	0.59	+0.2
5,591,317	-		AO353_25350	0.59	+1.5
5,591,317	-		AO353_25350	0.59	+0.5
5,591,348	-		AO353_25350	0.62	+0.7
5,591,532	+		AO353_25350	0.81	+1.2
5,591,532	+		AO353_25350	0.81	+1.5
5,591,532	+		AO353_25350	0.81	+0.1
5,591,532	+		AO353_25350	0.81	+2.1
5,591,532	+		AO353_25350	0.81	-1.3
5,591,532	+		AO353_25350	0.81	+0.2
5,591,533	-		AO353_25350	0.81	-1.7
5,591,533	-		AO353_25350	0.81	+1.5
5,591,533	-		AO353_25350	0.81	+2.1
5,591,613	+		AO353_25350	0.90	-0.6
5,591,613	+		AO353_25350	0.90	+1.5
5,591,614	-		AO353_25350	0.90	-0.1
5,591,614	-		AO353_25350	0.90	-1.1
5,591,614	-		AO353_25350	0.90	+0.9
5,591,614	-		AO353_25350	0.90	-1.4
5,591,709	+				-0.9
5,591,710	-				-0.0
5,591,799	+		AO353_25355	0.12	-1.3
5,591,799	+		AO353_25355	0.12	+0.6
5,591,799	+		AO353_25355	0.12	+0.1
5,591,799	+		AO353_25355	0.12	-1.1
5,591,800	-		AO353_25355	0.13	-0.7
5,591,800	-		AO353_25355	0.13	+0.1
5,591,800	-		AO353_25355	0.13	-0.1
5,591,955	+				-1.1
5,591,991	+				-0.0
5,591,991	+				+0.2
5,591,991	+				-0.4
5,591,992	-				-0.7
5,591,992	-				+0.5
5,591,992	-				-0.3
5,591,994	+				-0.3
5,591,994	+				+0.5
5,591,994	+				-0.7
5,591,994	+				-0.5
5,591,995	-				+1.5
5,591,995	-				-0.7
5,591,995	-				-0.6
5,591,995	-				+0.5
5,592,009	+				+1.1
5,592,009	+				+0.0
5,592,009	+				+0.1
5,592,009	+				-0.1
5,592,009	+				+1.1
5,592,009	+				-0.2
5,592,010	-				+0.9
5,592,010	-				+0.7
5,592,010	-				-0.3
5,592,010	-				+0.2
5,592,010	-				-1.7
5,592,010	-				+0.7
5,592,010	-				-0.0
5,592,108	-		AO353_25360	0.16	+0.5
5,592,144	+		AO353_25360	0.19	-1.3
5,592,144	+		AO353_25360	0.19	-0.9
5,592,144	+		AO353_25360	0.19	-0.5
5,592,145	-		AO353_25360	0.19	+0.1
5,592,145	-		AO353_25360	0.19	-0.2
5,592,145	-		AO353_25360	0.19	+1.5
5,592,375	+		AO353_25360	0.42	+0.9
5,592,376	-		AO353_25360	0.42	-0.7
5,592,427	+		AO353_25360	0.47	-1.5
5,592,428	-		AO353_25360	0.47	+0.1
5,592,521	-		AO353_25360	0.56	-1.2
5,592,521	-		AO353_25360	0.56	-0.2
5,592,521	-		AO353_25360	0.56	-1.1
5,592,544	+		AO353_25360	0.59	-0.7
5,592,545	-		AO353_25360	0.59	+0.7
5,592,546	+		AO353_25360	0.59	-1.7
5,592,547	-		AO353_25360	0.59	+0.9
5,592,547	-		AO353_25360	0.59	-0.4
5,592,547	-		AO353_25360	0.59	-2.4
5,592,671	+		AO353_25360	0.71	-0.1
5,592,672	-		AO353_25360	0.71	+1.5
5,592,705	+		AO353_25360	0.74	+1.5
5,592,705	+		AO353_25360	0.74	+0.1
5,592,705	+		AO353_25360	0.74	-0.3
5,592,705	+		AO353_25360	0.74	+0.5
5,592,706	-		AO353_25360	0.75	-0.1