Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT2730 and BT2731 are separated by 143 nucleotides BT2731 and BT2732 are separated by 136 nucleotides BT2732 and BT2733 are separated by 142 nucleotides
BT2730: BT2730 - 30S ribosomal protein S7 (NCBI ptt file), at 3,380,941 to 3,381,417
BT2730
BT2731: BT2731 - 30S ribosomal protein S12 (NCBI ptt file), at 3,381,561 to 3,381,962
BT2731
BT2732: BT2732 - hypothetical protein (NCBI ptt file), at 3,382,099 to 3,382,404
BT2732
BT2733: BT2733 - DNA-directed RNA polymerase beta' chain (NCBI ptt file), at 3,382,547 to 3,386,830
BT2733
Position (kb)
3382
3383 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3381.993 kb on - strand at 3382.038 kb on - strand at 3382.123 kb on + strand at 3382.159 kb on - strand, within BT2732 at 3382.159 kb on - strand, within BT2732 at 3382.186 kb on + strand, within BT2732 at 3382.187 kb on - strand, within BT2732 at 3382.187 kb on - strand, within BT2732 at 3382.192 kb on - strand, within BT2732 at 3382.235 kb on - strand, within BT2732 at 3382.238 kb on - strand, within BT2732 at 3382.239 kb on + strand, within BT2732 at 3382.239 kb on + strand, within BT2732 at 3382.240 kb on - strand, within BT2732 at 3382.240 kb on - strand, within BT2732 at 3382.243 kb on - strand, within BT2732 at 3382.286 kb on - strand, within BT2732 at 3382.320 kb on + strand, within BT2732 at 3382.354 kb on + strand, within BT2732 at 3382.378 kb on + strand at 3382.390 kb on - strand at 3382.412 kb on - strand at 3382.412 kb on - strand at 3382.464 kb on + strand at 3382.572 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 3,381,993 - -1.8 3,382,038 - +1.3 3,382,123 + -0.2 3,382,159 - BT2732 0.20 -3.3 3,382,159 - BT2732 0.20 +0.3 3,382,186 + BT2732 0.28 -3.0 3,382,187 - BT2732 0.29 +0.3 3,382,187 - BT2732 0.29 -2.0 3,382,192 - BT2732 0.30 -4.1 3,382,235 - BT2732 0.44 -1.5 3,382,238 - BT2732 0.45 -2.5 3,382,239 + BT2732 0.46 +0.8 3,382,239 + BT2732 0.46 +0.3 3,382,240 - BT2732 0.46 +1.3 3,382,240 - BT2732 0.46 -0.3 3,382,243 - BT2732 0.47 -3.8 3,382,286 - BT2732 0.61 -3.5 3,382,320 + BT2732 0.72 -0.3 3,382,354 + BT2732 0.83 -2.6 3,382,378 + -1.4 3,382,390 - -1.0 3,382,412 - -0.3 3,382,412 - +0.0 3,382,464 + +1.5 3,382,572 - +3.3
Or see this region's nucleotide sequence