Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2118

Experiment: Flask growth in 60 uE Light-Dark 12:12

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask growth in 60 uE Light-Dark 12:12
2,199,630	+				-2.1
2,199,638	-				-0.1
2,199,691	+				-2.3
2,199,700	-				-0.8
2,199,704	+				-0.5
2,199,705	-				-2.8
2,199,711	+				-3.3
2,199,719	-				+0.5
2,199,729	-		Synpcc7942_2118	0.12	-2.1
2,199,731	+		Synpcc7942_2118	0.13	-3.3
2,199,731	-		Synpcc7942_2118	0.13	+0.6
2,199,746	+		Synpcc7942_2118	0.18	-1.3
2,199,770	+		Synpcc7942_2118	0.26	-2.2
2,199,821	+		Synpcc7942_2118	0.44	-2.7
2,199,831	+		Synpcc7942_2118	0.48	-2.5
2,199,882	-		Synpcc7942_2118	0.65	-3.2
2,199,882	-		Synpcc7942_2118	0.65	-3.9
2,199,882	-		Synpcc7942_2118	0.65	-2.7
2,199,917	+		Synpcc7942_2118	0.77	-3.6
2,199,942	+		Synpcc7942_2118	0.86	-2.6
2,200,014	+				-2.8
2,200,032	+				-2.7
2,200,032	+				-3.5
2,200,033	-				-3.4
2,200,043	-				-2.7
2,200,046	+				-2.2
2,200,051	+				-4.0
2,200,053	+				-1.8
2,200,053	+				-2.3
2,200,058	+				-2.5
2,200,061	-				-2.3
2,200,061	-				-1.8
2,200,088	+				+0.2
2,200,093	+				-1.4
2,200,093	+				-1.2
2,200,102	+				+0.1
2,200,154	+				-2.7
2,200,164	+				+0.6
2,200,170	-				-1.6
2,200,186	+				-1.6
2,200,229	+				-1.5
2,200,229	+				+1.5
2,200,242	-				-0.1
2,200,266	-		Synpcc7942_2119	0.11	+0.8
2,200,358	-		Synpcc7942_2119	0.17	+1.6
2,200,448	-		Synpcc7942_2119	0.23	-1.1
2,200,501	-		Synpcc7942_2119	0.26	-2.2
2,200,676	-		Synpcc7942_2119	0.37	-1.7