Experiment: sn-glycero-3-phosphocholine (C) 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFR28_03150 and PFR28_03151 are separated by 118 nucleotides PFR28_03151 and PFR28_03152 are separated by 201 nucleotides
PFR28_03150: PFR28_03150 - Lipid A biosynthesis lauroyltransferase, at 3,658,890 to 3,659,822
_03150
PFR28_03151: PFR28_03151 - Septum site-determining protein MinC, at 3,659,941 to 3,660,678
_03151
PFR28_03152: PFR28_03152 - Septum site-determining protein MinD, at 3,660,880 to 3,661,692
_03152
Position (kb)
3659
3660
3661 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3659.824 kb on - strand at 3659.835 kb on - strand at 3659.856 kb on + strand at 3659.856 kb on + strand at 3659.856 kb on + strand at 3659.856 kb on + strand at 3659.856 kb on + strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.857 kb on - strand at 3659.897 kb on + strand at 3659.898 kb on - strand at 3659.899 kb on + strand at 3659.900 kb on - strand at 3659.900 kb on - strand at 3659.931 kb on + strand at 3659.932 kb on - strand at 3660.397 kb on + strand, within PFR28_03151 at 3660.397 kb on + strand, within PFR28_03151 at 3660.397 kb on + strand, within PFR28_03151 at 3660.397 kb on + strand, within PFR28_03151 at 3660.476 kb on + strand, within PFR28_03151 at 3660.477 kb on - strand, within PFR28_03151 at 3660.477 kb on - strand, within PFR28_03151 at 3660.479 kb on - strand, within PFR28_03151 at 3660.738 kb on + strand at 3660.771 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction sn-glycero-3-phosphocholine (C) 10 mM remove 3,659,824 - -1.8 3,659,835 - +0.2 3,659,856 + -1.3 3,659,856 + -0.1 3,659,856 + -0.6 3,659,856 + -0.0 3,659,856 + +0.3 3,659,857 - +0.4 3,659,857 - +0.3 3,659,857 - +0.3 3,659,857 - -0.5 3,659,857 - +0.5 3,659,857 - -0.3 3,659,857 - -0.1 3,659,857 - +0.6 3,659,857 - -0.7 3,659,897 + +0.3 3,659,898 - -0.6 3,659,899 + -0.6 3,659,900 - -0.4 3,659,900 - +1.4 3,659,931 + -0.1 3,659,932 - -0.5 3,660,397 + PFR28_03151 0.62 -2.0 3,660,397 + PFR28_03151 0.62 -1.9 3,660,397 + PFR28_03151 0.62 +1.1 3,660,397 + PFR28_03151 0.62 -2.1 3,660,476 + PFR28_03151 0.72 -3.1 3,660,477 - PFR28_03151 0.73 -0.9 3,660,477 - PFR28_03151 0.73 -0.9 3,660,479 - PFR28_03151 0.73 -1.0 3,660,738 + +0.9 3,660,771 + -0.6
Or see this region's nucleotide sequence