Strain Fitness in Pseudomonas sp. RS175 around PFR28_02289

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
2,737,033	+		PFR28_02288	0.68	+0.5
2,737,033	+		PFR28_02288	0.68	-0.3
2,737,034	-		PFR28_02288	0.68	-0.8
2,737,041	+		PFR28_02288	0.68	-0.9
2,737,128	+		PFR28_02288	0.75	+0.5
2,737,128	+		PFR28_02288	0.75	-0.3
2,737,128	+		PFR28_02288	0.75	-0.0
2,737,128	+		PFR28_02288	0.75	+0.6
2,737,128	+		PFR28_02288	0.75	+0.2
2,737,128	+		PFR28_02288	0.75	+0.1
2,737,128	+		PFR28_02288	0.75	-0.5
2,737,128	+		PFR28_02288	0.75	+0.9
2,737,129	-		PFR28_02288	0.75	+1.4
2,737,129	-		PFR28_02288	0.75	+0.5
2,737,129	-		PFR28_02288	0.75	+0.1
2,737,129	-		PFR28_02288	0.75	-0.2
2,737,129	-		PFR28_02288	0.75	+1.9
2,737,129	-		PFR28_02288	0.75	-0.2
2,737,129	-		PFR28_02288	0.75	+0.3
2,737,129	-		PFR28_02288	0.75	+1.2
2,737,129	-		PFR28_02288	0.75	+2.4
2,737,129	-		PFR28_02288	0.75	+0.9
2,737,129	-		PFR28_02288	0.75	-0.8
2,737,129	-		PFR28_02288	0.75	+0.0
2,737,129	-		PFR28_02288	0.75	+0.1
2,737,183	+		PFR28_02288	0.78	+0.2
2,737,183	+		PFR28_02288	0.78	+0.8
2,737,183	+		PFR28_02288	0.78	-0.0
2,737,183	+		PFR28_02288	0.78	+0.0
2,737,184	-		PFR28_02288	0.79	+0.5
2,737,184	-		PFR28_02288	0.79	+1.4
2,737,234	+		PFR28_02288	0.82	-0.4
2,737,234	+		PFR28_02288	0.82	-0.2
2,737,234	+		PFR28_02288	0.82	+0.8
2,737,381	-				+0.1
2,737,394	+				+0.5
2,737,490	+				-1.8
2,737,575	+				+0.6
2,737,593	-				-0.5
2,737,593	-				-1.0
2,737,626	-				-0.1
2,737,651	-				+0.4
2,737,656	+				-0.7
2,737,656	+				+0.7
2,737,656	+				+1.1
2,737,656	+				+0.6
2,737,657	-				+2.0
2,737,657	-				+0.1
2,737,657	-				-0.4
2,737,657	-				+2.4
2,737,691	+				-2.1
2,737,691	+				-0.6
2,737,691	+				+0.0
2,737,692	-				+0.2
2,737,692	-				+0.2
2,737,692	-				-0.7
2,737,733	+				-0.4
2,737,734	-				-0.8
2,737,774	+				+1.1
2,737,884	+				-2.3
2,738,056	+		PFR28_02289	0.25	+2.4
2,738,057	-		PFR28_02289	0.25	+0.6
2,738,555	+				-0.6
2,738,555	+				+1.1
2,738,557	+				+0.7
2,738,557	+				+1.2
2,738,557	+				+1.4
2,738,557	+				-0.4
2,738,557	+				-1.0
2,738,558	-				-1.2
2,738,558	-				+0.4
2,738,558	-				+1.1
2,738,677	+				-0.4
2,738,677	+				-0.8
2,738,677	+				-0.8
2,738,677	+				-0.4
2,738,677	+				-0.2
2,738,678	-				-0.4
2,738,678	-				-2.9
2,738,678	-				-0.5
2,738,679	+				-0.6
2,738,680	-				+0.2
2,738,680	-				+1.1
2,738,680	-				+0.6
2,738,680	-				+0.0
2,738,680	-				+0.3
2,738,680	-				-0.8
2,738,680	-				-0.1
2,738,681	+				+1.4
2,738,681	+				-0.2
2,738,681	+				-0.2
2,738,681	+				+1.0
2,738,681	+				-0.5
2,738,681	+				-0.3
2,738,681	+				-0.0
2,738,681	+				-0.9
2,738,681	+				-0.4
2,738,681	+				-0.2
2,738,681	+				-0.7
2,738,681	+				-0.7
2,738,681	+				-0.2
2,738,681	+				+0.4
2,738,681	+				+0.9
2,738,681	+				-0.4
2,738,681	+				+0.3
2,738,681	+				+0.4
2,738,681	+				+0.5
2,738,681	+				+1.8
2,738,681	+				+0.6
2,738,681	+				+0.9
2,738,681	+				-0.2
2,738,681	+				-0.2
2,738,681	+				-0.5
2,738,681	+				+0.3
2,738,681	+				+1.1
2,738,681	+				-0.1
2,738,681	+				-2.0
2,738,681	+				-0.3
2,738,682	-				+0.4
2,738,682	-				-0.8
2,738,682	-				+0.3
2,738,682	-				-0.3
2,738,682	-				+1.2
2,738,682	-				-0.5
2,738,682	-				-0.4
2,738,682	-				+0.7
2,738,682	-				-2.1
2,738,682	-				+1.7
2,738,682	-				+0.5
2,738,682	-				-0.3
2,738,682	-				+0.2
2,738,682	-				+0.4
2,738,682	-				+0.8
2,738,682	-				+0.7
2,738,682	-				+0.3
2,738,682	-				-0.2
2,738,682	-				+0.9
2,738,682	-				+0.4
2,738,682	-				+0.2
2,738,682	-				-0.0
2,738,795	+		PFR28_02290	0.20	+0.1
2,738,795	+		PFR28_02290	0.20	+0.4
2,738,795	+		PFR28_02290	0.20	-0.5
2,738,795	+		PFR28_02290	0.20	-0.9
2,738,795	+		PFR28_02290	0.20	+0.5
2,738,795	+		PFR28_02290	0.20	+0.6
2,738,795	+		PFR28_02290	0.20	-0.0
2,738,795	+		PFR28_02290	0.20	-1.0
2,738,796	-		PFR28_02290	0.20	-1.1
2,738,796	-		PFR28_02290	0.20	-0.8
2,738,796	-		PFR28_02290	0.20	+0.0
2,738,796	-		PFR28_02290	0.20	-0.4
2,738,796	-		PFR28_02290	0.20	-1.2
2,738,810	+		PFR28_02290	0.21	+0.4
2,738,839	-		PFR28_02290	0.24	-1.2
2,738,839	-		PFR28_02290	0.24	-0.2
2,739,002	+		PFR28_02290	0.39	-1.4
2,739,020	+		PFR28_02290	0.40	+0.6
2,739,021	-		PFR28_02290	0.40	+2.6
2,739,021	-		PFR28_02290	0.40	-0.9
2,739,021	-		PFR28_02290	0.40	-0.1
2,739,029	+		PFR28_02290	0.41	+0.8
2,739,029	+		PFR28_02290	0.41	-0.1
2,739,029	+		PFR28_02290	0.41	-0.1
2,739,030	-		PFR28_02290	0.41	+1.4
2,739,030	-		PFR28_02290	0.41	+1.2
2,739,030	-		PFR28_02290	0.41	-0.6
2,739,069	-		PFR28_02290	0.45	-0.3
2,739,235	+		PFR28_02290	0.60	+0.7
2,739,260	+		PFR28_02290	0.62	+0.4
2,739,261	-		PFR28_02290	0.62	-1.0
2,739,440	+		PFR28_02290	0.78	+0.2
2,739,441	-		PFR28_02290	0.78	+0.3
2,739,441	-		PFR28_02290	0.78	+0.2
2,739,512	+		PFR28_02290	0.85	-1.2
2,739,512	+		PFR28_02290	0.85	+1.9
2,739,512	+		PFR28_02290	0.85	+0.4
2,739,512	+		PFR28_02290	0.85	-1.0
2,739,513	-		PFR28_02290	0.85	-0.3
2,739,513	-		PFR28_02290	0.85	+1.3