Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS19900 and ABZR86_RS19905 are separated by 154 nucleotides ABZR86_RS19905 and ABZR86_RS19910 are separated by 10 nucleotides ABZR86_RS19910 and ABZR86_RS19915 are separated by 4 nucleotides ABZR86_RS19915 and ABZR86_RS19920 are separated by 111 nucleotides
ABZR86_RS19900: ABZR86_RS19900 - hemolysin family protein, at 474,970 to 476,292
_RS19900
ABZR86_RS19905: ABZR86_RS19905 - DUF47 domain-containing protein, at 476,447 to 477,076
_RS19905
ABZR86_RS19910: ABZR86_RS19910 - inorganic phosphate transporter, at 477,087 to 478,205
_RS19910
ABZR86_RS19915: ABZR86_RS19915 - hypothetical protein, at 478,210 to 478,614
_RS19915
ABZR86_RS19920: ABZR86_RS19920 - MGMT family protein, at 478,726 to 479,067
_RS19920
Position (kb) 477
478
479 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 476.333 kb on + strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.334 kb on - strand at 476.395 kb on - strand at 476.399 kb on + strand at 476.399 kb on + strand at 476.399 kb on + strand at 476.400 kb on - strand at 476.400 kb on - strand at 476.489 kb on + strand at 476.490 kb on - strand at 476.490 kb on - strand at 476.705 kb on + strand, within ABZR86_RS19905 at 476.706 kb on - strand, within ABZR86_RS19905 at 476.706 kb on - strand, within ABZR86_RS19905 at 476.745 kb on - strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.948 kb on + strand, within ABZR86_RS19905 at 476.949 kb on - strand, within ABZR86_RS19905 at 476.949 kb on - strand, within ABZR86_RS19905 at 477.051 kb on - strand at 477.051 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.133 kb on - strand at 477.588 kb on + strand, within ABZR86_RS19910 at 477.588 kb on + strand, within ABZR86_RS19910 at 478.203 kb on + strand at 478.204 kb on - strand at 478.313 kb on + strand, within ABZR86_RS19915 at 478.313 kb on + strand, within ABZR86_RS19915 at 478.314 kb on - strand, within ABZR86_RS19915 at 478.496 kb on + strand, within ABZR86_RS19915 at 478.496 kb on + strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.497 kb on - strand, within ABZR86_RS19915 at 478.547 kb on + strand, within ABZR86_RS19915 at 478.547 kb on + strand, within ABZR86_RS19915 at 478.678 kb on + strand at 478.679 kb on - strand at 478.691 kb on + strand at 478.691 kb on + strand at 478.691 kb on + strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.692 kb on - strand at 478.792 kb on + strand, within ABZR86_RS19920 at 478.793 kb on - strand, within ABZR86_RS19920 at 479.066 kb on - strand at 479.146 kb on + strand at 479.147 kb on - strand at 479.147 kb on - strand at 479.155 kb on + strand at 479.155 kb on + strand at 479.156 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.162 kb on - strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.183 kb on + strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand at 479.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 476,333 + -0.5 476,334 - +1.6 476,334 - +0.1 476,334 - +0.2 476,334 - +0.8 476,334 - -0.2 476,395 - -0.2 476,399 + +0.6 476,399 + -0.2 476,399 + +0.5 476,400 - +1.1 476,400 - -0.2 476,489 + -1.2 476,490 - -2.4 476,490 - -1.9 476,705 + ABZR86_RS19905 0.41 -1.2 476,706 - ABZR86_RS19905 0.41 -1.3 476,706 - ABZR86_RS19905 0.41 -0.0 476,745 - ABZR86_RS19905 0.47 -3.0 476,948 + ABZR86_RS19905 0.80 -1.8 476,948 + ABZR86_RS19905 0.80 +2.1 476,948 + ABZR86_RS19905 0.80 -1.3 476,949 - ABZR86_RS19905 0.80 -0.5 476,949 - ABZR86_RS19905 0.80 -3.0 477,051 - -0.9 477,051 - +0.5 477,133 - -2.3 477,133 - -2.1 477,133 - -1.2 477,133 - -1.3 477,588 + ABZR86_RS19910 0.45 -1.8 477,588 + ABZR86_RS19910 0.45 -0.8 478,203 + +0.4 478,204 - -1.4 478,313 + ABZR86_RS19915 0.25 +0.1 478,313 + ABZR86_RS19915 0.25 +0.3 478,314 - ABZR86_RS19915 0.26 -0.4 478,496 + ABZR86_RS19915 0.71 -0.4 478,496 + ABZR86_RS19915 0.71 +0.4 478,497 - ABZR86_RS19915 0.71 -0.0 478,497 - ABZR86_RS19915 0.71 -0.4 478,497 - ABZR86_RS19915 0.71 +0.4 478,497 - ABZR86_RS19915 0.71 +0.2 478,497 - ABZR86_RS19915 0.71 +1.1 478,497 - ABZR86_RS19915 0.71 +0.9 478,497 - ABZR86_RS19915 0.71 -0.8 478,497 - ABZR86_RS19915 0.71 -0.4 478,497 - ABZR86_RS19915 0.71 -0.8 478,547 + ABZR86_RS19915 0.83 -1.8 478,547 + ABZR86_RS19915 0.83 +0.1 478,678 + +0.9 478,679 - -0.5 478,691 + +0.2 478,691 + +0.1 478,691 + +0.1 478,692 - +0.5 478,692 - -0.6 478,692 - +0.2 478,692 - +0.7 478,692 - +1.3 478,692 - +0.7 478,692 - +0.2 478,792 + ABZR86_RS19920 0.19 -0.2 478,793 - ABZR86_RS19920 0.20 -0.7 479,066 - +0.5 479,146 + +0.2 479,147 - -0.9 479,147 - -0.8 479,155 + +0.4 479,155 + -0.2 479,156 - -1.2 479,162 - -2.3 479,162 - +0.5 479,162 - +0.1 479,162 - +1.5 479,183 + -0.5 479,183 + -2.4 479,183 + +1.3 479,183 + -0.2 479,183 + -0.4 479,183 + -0.3 479,184 - +0.6 479,184 - +0.4 479,184 - +0.2 479,184 - -0.5 479,184 - +0.4 479,184 - -0.8 479,184 - -0.3 479,184 - -0.5
Or see this region's nucleotide sequence