Strain Fitness in Pseudomonas sp. RS175 around PFR28_03612

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
4,171,489	+		PFR28_03611	0.42	-0.8
4,171,489	+		PFR28_03611	0.42	-0.5
4,171,490	-		PFR28_03611	0.42	+0.2
4,171,490	-		PFR28_03611	0.42	-1.6
4,171,490	-		PFR28_03611	0.42	+0.7
4,171,490	-		PFR28_03611	0.42	-0.7
4,171,490	-		PFR28_03611	0.42	-1.2
4,171,612	+		PFR28_03611	0.54	-0.9
4,171,612	+		PFR28_03611	0.54	-1.2
4,171,612	+		PFR28_03611	0.54	-0.9
4,171,612	+		PFR28_03611	0.54	+0.8
4,171,612	+		PFR28_03611	0.54	-0.4
4,171,612	+		PFR28_03611	0.54	+0.3
4,171,612	+		PFR28_03611	0.54	-0.4
4,171,612	+		PFR28_03611	0.54	+0.5
4,171,612	+		PFR28_03611	0.54	-0.5
4,171,612	+		PFR28_03611	0.54	-1.0
4,171,612	+		PFR28_03611	0.54	+0.5
4,171,612	+		PFR28_03611	0.54	-0.3
4,171,612	+		PFR28_03611	0.54	+0.2
4,171,612	+		PFR28_03611	0.54	-0.1
4,171,612	+		PFR28_03611	0.54	-0.8
4,171,612	+		PFR28_03611	0.54	-0.7
4,171,613	-		PFR28_03611	0.54	-1.5
4,171,613	-		PFR28_03611	0.54	+0.3
4,171,613	-		PFR28_03611	0.54	-0.4
4,171,613	-		PFR28_03611	0.54	-0.1
4,171,613	-		PFR28_03611	0.54	-0.7
4,171,613	-		PFR28_03611	0.54	-0.5
4,171,613	-		PFR28_03611	0.54	-1.2
4,171,613	-		PFR28_03611	0.54	-0.3
4,171,613	-		PFR28_03611	0.54	-1.2
4,171,613	-		PFR28_03611	0.54	+0.2
4,171,613	-		PFR28_03611	0.54	-0.1
4,171,613	-		PFR28_03611	0.54	-1.4
4,171,613	-		PFR28_03611	0.54	-0.9
4,171,618	+		PFR28_03611	0.55	-0.0
4,171,618	+		PFR28_03611	0.55	-0.9
4,171,618	+		PFR28_03611	0.55	-0.7
4,171,618	+		PFR28_03611	0.55	-0.7
4,171,618	+		PFR28_03611	0.55	-0.5
4,171,618	+		PFR28_03611	0.55	-0.2
4,171,618	+		PFR28_03611	0.55	-0.0
4,171,619	-		PFR28_03611	0.55	-0.7
4,171,619	-		PFR28_03611	0.55	-0.3
4,171,619	-		PFR28_03611	0.55	-0.4
4,171,619	-		PFR28_03611	0.55	+1.3
4,171,619	-		PFR28_03611	0.55	+0.3
4,171,619	-		PFR28_03611	0.55	-0.8
4,171,619	-		PFR28_03611	0.55	-0.6
4,171,619	-		PFR28_03611	0.55	-0.6
4,171,619	-		PFR28_03611	0.55	-1.9
4,171,619	-		PFR28_03611	0.55	-0.5
4,171,679	-		PFR28_03611	0.61	+1.4
4,171,679	-		PFR28_03611	0.61	+0.0
4,171,679	-		PFR28_03611	0.61	-0.1
4,171,679	-		PFR28_03611	0.61	+0.5
4,171,679	-		PFR28_03611	0.61	-0.8
4,171,679	-		PFR28_03611	0.61	+0.0
4,171,679	-		PFR28_03611	0.61	-0.1
4,171,696	+		PFR28_03611	0.63	+0.1
4,171,696	+		PFR28_03611	0.63	+0.0
4,171,696	+		PFR28_03611	0.63	-1.0
4,171,696	+		PFR28_03611	0.63	+1.2
4,171,696	+		PFR28_03611	0.63	+0.8
4,171,697	-		PFR28_03611	0.63	+0.8
4,171,697	-		PFR28_03611	0.63	-0.1
4,171,697	-		PFR28_03611	0.63	+0.0
4,171,697	-		PFR28_03611	0.63	-0.5
4,171,888	+		PFR28_03611	0.82	+0.6
4,171,888	+		PFR28_03611	0.82	-1.5
4,171,889	-		PFR28_03611	0.82	-0.8
4,171,889	-		PFR28_03611	0.82	+0.2
4,171,907	+		PFR28_03611	0.84	-0.4
4,171,908	-		PFR28_03611	0.84	+0.1
4,171,908	-		PFR28_03611	0.84	-0.1
4,171,908	-		PFR28_03611	0.84	-1.3
4,171,963	+		PFR28_03611	0.89	-0.4
4,171,963	+		PFR28_03611	0.89	+0.5
4,171,963	+		PFR28_03611	0.89	-0.6
4,171,963	+		PFR28_03611	0.89	+0.3
4,171,963	+		PFR28_03611	0.89	-0.6
4,171,963	+		PFR28_03611	0.89	-0.2
4,171,963	+		PFR28_03611	0.89	+0.3
4,171,964	-		PFR28_03611	0.90	-0.7
4,171,964	-		PFR28_03611	0.90	+0.1
4,171,964	-		PFR28_03611	0.90	-0.2
4,171,964	-		PFR28_03611	0.90	-0.8
4,171,964	-		PFR28_03611	0.90	-0.7
4,171,964	-		PFR28_03611	0.90	-0.1
4,171,964	-		PFR28_03611	0.90	-0.1
4,172,260	+				+0.6
4,172,356	+				-1.3
4,172,357	-				-2.2
4,172,357	-				-1.6
4,172,357	-				-1.1
4,172,410	+		PFR28_03612	0.15	-2.6
4,172,521	+		PFR28_03612	0.26	-2.2
4,172,522	-		PFR28_03612	0.26	-0.6
4,172,522	-		PFR28_03612	0.26	-0.2
4,172,714	-		PFR28_03612	0.45	-0.7
4,172,845	+		PFR28_03612	0.57	-2.4
4,172,845	+		PFR28_03612	0.57	-0.5
4,172,846	-		PFR28_03612	0.58	+0.7
4,173,133	+		PFR28_03612	0.86	-0.3
4,173,133	+		PFR28_03612	0.86	-0.9
4,173,133	+		PFR28_03612	0.86	-1.4
4,173,134	-		PFR28_03612	0.86	-1.7
4,173,134	-		PFR28_03612	0.86	-0.5
4,173,134	-		PFR28_03612	0.86	-3.0
4,173,166	+		PFR28_03612	0.89	-1.3
4,173,166	+		PFR28_03612	0.89	-2.3
4,173,167	-		PFR28_03612	0.89	-0.4
4,173,257	-				-1.7
4,173,342	+				-2.9
4,173,342	+				-0.8
4,173,342	+				-0.3
4,173,353	+				-1.3
4,173,353	+				+0.3
4,173,353	+				-1.4
4,173,354	-				-0.1
4,173,354	-				+0.6
4,173,354	-				+0.2
4,173,390	+				-0.1
4,173,391	-				-0.8