Strain Fitness in Pseudomonas sp. RS175 around PFR28_01930

Experiment: trans-aconitic (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	trans-aconitic (C) 5 mM
2,188,024	-		PFR28_01929	0.40	+0.0
2,188,041	+		PFR28_01929	0.42	-0.4
2,188,041	+		PFR28_01929	0.42	-1.3
2,188,042	-		PFR28_01929	0.42	-0.1
2,188,043	+		PFR28_01929	0.42	-1.2
2,188,467	+		PFR28_01929	0.75	-0.1
2,188,494	+		PFR28_01929	0.77	+0.2
2,188,494	+		PFR28_01929	0.77	+0.6
2,188,494	+		PFR28_01929	0.77	+0.9
2,188,494	+		PFR28_01929	0.77	-0.2
2,188,494	+		PFR28_01929	0.77	-0.1
2,188,494	+		PFR28_01929	0.77	+0.6
2,188,494	+		PFR28_01929	0.77	-1.3
2,188,494	+		PFR28_01929	0.77	-0.3
2,188,495	-		PFR28_01929	0.77	-0.0
2,188,496	+		PFR28_01929	0.77	+0.3
2,188,496	+		PFR28_01929	0.77	-0.0
2,188,496	+		PFR28_01929	0.77	+0.3
2,188,497	-		PFR28_01929	0.77	-0.2
2,188,497	-		PFR28_01929	0.77	+0.5
2,188,497	-		PFR28_01929	0.77	+0.6
2,188,579	-		PFR28_01929	0.84	+0.3
2,188,706	-				-0.4
2,188,707	+				-0.8
2,188,707	+				-0.1
2,188,707	+				-0.2
2,188,708	-				-1.3
2,188,708	-				+0.1
2,188,708	-				-0.2
2,188,864	-				-0.0
2,188,864	-				-0.3
2,188,873	-				+0.0
2,188,935	+				-0.4
2,188,935	+				-0.0
2,188,935	+				+0.3
2,188,936	-				+0.4
2,188,992	+				-1.6
2,188,995	+				-2.6
2,188,995	+				-1.5
2,188,996	-				-2.3
2,189,451	+		PFR28_01930	0.75	-1.5
2,189,451	+		PFR28_01930	0.75	-1.5
2,189,452	-		PFR28_01930	0.75	-2.5
2,189,452	-		PFR28_01930	0.75	-2.4
2,189,453	+		PFR28_01930	0.75	-2.2
2,189,453	+		PFR28_01930	0.75	-2.4
2,189,453	+		PFR28_01930	0.75	-2.6
2,189,454	-		PFR28_01930	0.75	-0.7
2,189,473	-		PFR28_01930	0.78	-1.2
2,189,473	-		PFR28_01930	0.78	-1.6
2,189,619	+				+0.5
2,189,619	+				+0.7
2,190,117	+		PFR28_01931	0.52	-0.2
2,190,118	-		PFR28_01931	0.52	-1.2
2,190,179	+		PFR28_01931	0.59	+1.0
2,190,179	+		PFR28_01931	0.59	-0.4
2,190,179	+		PFR28_01931	0.59	+0.9
2,190,179	+		PFR28_01931	0.59	+0.1
2,190,180	-		PFR28_01931	0.59	+1.5
2,190,180	-		PFR28_01931	0.59	-1.9
2,190,180	-		PFR28_01931	0.59	+0.6
2,190,180	-		PFR28_01931	0.59	-0.1
2,190,180	-		PFR28_01931	0.59	+1.5
2,190,180	-		PFR28_01931	0.59	-0.3
2,190,255	+		PFR28_01931	0.67	-0.1
2,190,255	+		PFR28_01931	0.67	+0.7
2,190,255	+		PFR28_01931	0.67	-0.2
2,190,256	-		PFR28_01931	0.67	-0.1
2,190,256	-		PFR28_01931	0.67	-0.1
2,190,503	+				+0.8
2,190,503	+				-0.2
2,190,504	-				-1.5
2,190,534	+				+0.4
2,190,535	-				+0.9
2,190,607	-				-0.2