Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25580 and AO353_25585 are separated by 294 nucleotides AO353_25585 and AO353_25590 are separated by 83 nucleotides AO353_25590 and AO353_25595 are separated by 10 nucleotides
AO353_25580: AO353_25580 - LysR family transcriptional regulator, at 5,642,698 to 5,643,663
_25580
AO353_25585: AO353_25585 - argininosuccinate lyase, at 5,643,958 to 5,645,385
_25585
AO353_25590: AO353_25590 - ABC transporter permease, at 5,645,469 to 5,646,344
_25590
AO353_25595: AO353_25595 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 5,646,355 to 5,647,119
_25595
Position (kb)
5643
5644
5645
5646 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5643.099 kb on - strand, within AO353_25580 at 5643.110 kb on + strand, within AO353_25580 at 5643.111 kb on - strand, within AO353_25580 at 5643.145 kb on + strand, within AO353_25580 at 5643.170 kb on - strand, within AO353_25580 at 5643.342 kb on + strand, within AO353_25580 at 5643.342 kb on + strand, within AO353_25580 at 5643.343 kb on - strand, within AO353_25580 at 5643.343 kb on - strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.424 kb on - strand, within AO353_25580 at 5643.445 kb on - strand, within AO353_25580 at 5643.565 kb on + strand, within AO353_25580 at 5643.566 kb on - strand, within AO353_25580 at 5643.671 kb on - strand at 5643.671 kb on - strand at 5643.674 kb on + strand at 5643.732 kb on - strand at 5644.049 kb on - strand at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5645.366 kb on - strand at 5645.387 kb on + strand at 5645.388 kb on - strand at 5645.423 kb on + strand at 5645.424 kb on - strand at 5645.424 kb on - strand at 5645.538 kb on + strand at 5645.538 kb on + strand at 5645.539 kb on - strand at 5645.539 kb on - strand at 5645.539 kb on - strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.549 kb on - strand at 5645.549 kb on - strand at 5645.549 kb on - strand at 5645.563 kb on - strand, within AO353_25590 at 5645.649 kb on + strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.794 kb on - strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.876 kb on - strand, within AO353_25590 at 5645.876 kb on - strand, within AO353_25590 at 5645.979 kb on + strand, within AO353_25590 at 5645.979 kb on + strand, within AO353_25590 at 5645.980 kb on - strand, within AO353_25590 at 5645.980 kb on - strand, within AO353_25590 at 5646.192 kb on + strand, within AO353_25590 at 5646.192 kb on + strand, within AO353_25590 at 5646.193 kb on - strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.214 kb on - strand, within AO353_25590 at 5646.214 kb on - strand, within AO353_25590 at 5646.238 kb on + strand, within AO353_25590 at 5646.239 kb on - strand, within AO353_25590 at 5646.261 kb on + strand at 5646.261 kb on + strand at 5646.262 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 5,643,099 - AO353_25580 0.42 +1.0 5,643,110 + AO353_25580 0.43 +0.7 5,643,111 - AO353_25580 0.43 +0.5 5,643,145 + AO353_25580 0.46 +1.5 5,643,170 - AO353_25580 0.49 -0.1 5,643,342 + AO353_25580 0.67 +0.7 5,643,342 + AO353_25580 0.67 +1.3 5,643,343 - AO353_25580 0.67 +0.7 5,643,343 - AO353_25580 0.67 -0.3 5,643,423 + AO353_25580 0.75 -1.3 5,643,423 + AO353_25580 0.75 -0.0 5,643,423 + AO353_25580 0.75 +0.7 5,643,424 - AO353_25580 0.75 +0.1 5,643,445 - AO353_25580 0.77 +2.5 5,643,565 + AO353_25580 0.90 +0.7 5,643,566 - AO353_25580 0.90 -1.3 5,643,671 - +1.3 5,643,671 - -0.9 5,643,674 + -1.3 5,643,732 - +1.1 5,644,049 - +0.5 5,644,918 + AO353_25585 0.67 +1.3 5,644,918 + AO353_25585 0.67 +0.7 5,644,918 + AO353_25585 0.67 +0.8 5,644,918 + AO353_25585 0.67 +1.3 5,644,918 + AO353_25585 0.67 +1.3 5,645,366 - +2.3 5,645,387 + +1.3 5,645,388 - -0.3 5,645,423 + +0.0 5,645,424 - +1.3 5,645,424 - +0.7 5,645,538 + +1.1 5,645,538 + +0.0 5,645,539 - +0.7 5,645,539 - +0.4 5,645,539 - -0.9 5,645,548 + -0.3 5,645,548 + +0.2 5,645,548 + +0.7 5,645,548 + -1.9 5,645,549 - -0.3 5,645,549 - +2.5 5,645,549 - +0.7 5,645,563 - AO353_25590 0.11 +0.3 5,645,649 + AO353_25590 0.21 -0.3 5,645,650 - AO353_25590 0.21 -0.9 5,645,650 - AO353_25590 0.21 -1.9 5,645,650 - AO353_25590 0.21 +2.1 5,645,794 - AO353_25590 0.37 +2.5 5,645,808 + AO353_25590 0.39 -1.3 5,645,808 + AO353_25590 0.39 -0.8 5,645,808 + AO353_25590 0.39 +0.3 5,645,808 + AO353_25590 0.39 -0.3 5,645,808 + AO353_25590 0.39 -1.9 5,645,809 - AO353_25590 0.39 -0.7 5,645,809 - AO353_25590 0.39 +0.7 5,645,809 - AO353_25590 0.39 +0.3 5,645,809 - AO353_25590 0.39 -0.0 5,645,809 - AO353_25590 0.39 -2.3 5,645,876 - AO353_25590 0.46 -0.3 5,645,876 - AO353_25590 0.46 +1.7 5,645,979 + AO353_25590 0.58 -1.3 5,645,979 + AO353_25590 0.58 -0.3 5,645,980 - AO353_25590 0.58 +0.7 5,645,980 - AO353_25590 0.58 -1.9 5,646,192 + AO353_25590 0.83 +0.1 5,646,192 + AO353_25590 0.83 -0.3 5,646,193 - AO353_25590 0.83 +0.7 5,646,210 + AO353_25590 0.85 +1.1 5,646,210 + AO353_25590 0.85 -0.3 5,646,210 + AO353_25590 0.85 -0.3 5,646,210 + AO353_25590 0.85 -0.8 5,646,210 + AO353_25590 0.85 +0.1 5,646,211 - AO353_25590 0.85 +1.5 5,646,211 - AO353_25590 0.85 +1.3 5,646,211 - AO353_25590 0.85 -1.0 5,646,211 - AO353_25590 0.85 +1.5 5,646,211 - AO353_25590 0.85 +1.6 5,646,214 - AO353_25590 0.85 -1.3 5,646,214 - AO353_25590 0.85 -0.9 5,646,238 + AO353_25590 0.88 -0.3 5,646,239 - AO353_25590 0.88 +1.0 5,646,261 + +0.6 5,646,261 + +1.0 5,646,262 - -2.9
Or see this region's nucleotide sequence