Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18670 and AO353_18675 are separated by 291 nucleotides AO353_18675 and AO353_18680 are separated by 15 nucleotides
AO353_18670: AO353_18670 - Fis family transcriptional regulator, at 4,108,559 to 4,109,959
_18670
AO353_18675: AO353_18675 - flagellar hook-basal body protein FliE, at 4,110,251 to 4,110,580
_18675
AO353_18680: AO353_18680 - flagellar M-ring protein FliF, at 4,110,596 to 4,112,383
_18680
Position (kb)
4110
4111 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.420 kb on + strand, within AO353_18670 at 4109.421 kb on - strand, within AO353_18670 at 4109.423 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.521 kb on + strand, within AO353_18670 at 4109.522 kb on - strand, within AO353_18670 at 4109.522 kb on - strand, within AO353_18670 at 4109.598 kb on + strand, within AO353_18670 at 4109.598 kb on + strand, within AO353_18670 at 4109.598 kb on + strand, within AO353_18670 at 4109.598 kb on + strand, within AO353_18670 at 4109.598 kb on + strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.599 kb on - strand, within AO353_18670 at 4109.818 kb on + strand, within AO353_18670 at 4109.824 kb on + strand at 4109.897 kb on + strand at 4109.942 kb on + strand at 4109.942 kb on + strand at 4109.943 kb on - strand at 4109.964 kb on + strand at 4109.970 kb on + strand at 4109.970 kb on + strand at 4109.970 kb on + strand at 4109.971 kb on - strand at 4109.971 kb on - strand at 4110.032 kb on - strand at 4110.124 kb on + strand at 4110.153 kb on + strand at 4110.153 kb on + strand at 4110.153 kb on + strand at 4110.153 kb on + strand at 4110.245 kb on + strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.246 kb on - strand at 4110.263 kb on - strand at 4110.272 kb on - strand at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.477 kb on + strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.478 kb on - strand, within AO353_18675 at 4110.480 kb on - strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.504 kb on + strand, within AO353_18675 at 4110.505 kb on - strand, within AO353_18675 at 4110.505 kb on - strand, within AO353_18675 at 4110.505 kb on - strand, within AO353_18675 at 4110.505 kb on - strand, within AO353_18675 at 4110.505 kb on - strand at 4110.505 kb on - strand, within AO353_18675 at 4110.505 kb on - strand, within AO353_18675 at 4110.551 kb on + strand at 4110.551 kb on + strand at 4110.552 kb on - strand at 4110.552 kb on - strand at 4110.578 kb on + strand at 4110.578 kb on + strand at 4110.579 kb on - strand at 4110.579 kb on - strand at 4110.714 kb on + strand at 4110.715 kb on - strand at 4110.866 kb on + strand, within AO353_18680 at 4110.867 kb on - strand, within AO353_18680 at 4110.867 kb on - strand, within AO353_18680 at 4110.915 kb on + strand, within AO353_18680 at 4110.915 kb on + strand, within AO353_18680 at 4110.915 kb on + strand, within AO353_18680 at 4110.915 kb on + strand, within AO353_18680 at 4110.916 kb on - strand, within AO353_18680 at 4110.916 kb on - strand, within AO353_18680 at 4111.185 kb on - strand, within AO353_18680 at 4111.185 kb on - strand, within AO353_18680 at 4111.185 kb on - strand, within AO353_18680 at 4111.399 kb on + strand, within AO353_18680 at 4111.400 kb on - strand, within AO353_18680 at 4111.400 kb on - strand, within AO353_18680 at 4111.400 kb on - strand, within AO353_18680 at 4111.430 kb on + strand, within AO353_18680 at 4111.430 kb on + strand, within AO353_18680 at 4111.430 kb on + strand, within AO353_18680
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 4,109,420 + AO353_18670 0.61 +2.9 4,109,420 + AO353_18670 0.61 -0.1 4,109,420 + AO353_18670 0.61 +1.5 4,109,420 + AO353_18670 0.61 +0.9 4,109,420 + AO353_18670 0.61 -0.1 4,109,420 + AO353_18670 0.61 +1.5 4,109,420 + AO353_18670 0.61 +0.8 4,109,421 - AO353_18670 0.62 +0.3 4,109,423 + AO353_18670 0.62 -0.7 4,109,521 + AO353_18670 0.69 +0.6 4,109,521 + AO353_18670 0.69 +0.5 4,109,521 + AO353_18670 0.69 -0.1 4,109,522 - AO353_18670 0.69 +2.5 4,109,522 - AO353_18670 0.69 +2.3 4,109,598 + AO353_18670 0.74 -1.1 4,109,598 + AO353_18670 0.74 -0.4 4,109,598 + AO353_18670 0.74 -0.1 4,109,598 + AO353_18670 0.74 +1.2 4,109,598 + AO353_18670 0.74 +0.1 4,109,599 - AO353_18670 0.74 +0.6 4,109,599 - AO353_18670 0.74 -0.7 4,109,599 - AO353_18670 0.74 +0.5 4,109,599 - AO353_18670 0.74 +1.5 4,109,599 - AO353_18670 0.74 -0.7 4,109,599 - AO353_18670 0.74 -0.4 4,109,818 + AO353_18670 0.90 +0.7 4,109,824 + -0.7 4,109,897 + +1.0 4,109,942 + -1.1 4,109,942 + +1.2 4,109,943 - +2.0 4,109,964 + +0.1 4,109,970 + +0.5 4,109,970 + -0.1 4,109,970 + -2.1 4,109,971 - +0.7 4,109,971 - +0.9 4,110,032 - -0.1 4,110,124 + -0.1 4,110,153 + +0.5 4,110,153 + -0.1 4,110,153 + +1.1 4,110,153 + -1.9 4,110,245 + -0.4 4,110,246 - +0.3 4,110,246 - -2.1 4,110,246 - +1.1 4,110,246 - -1.1 4,110,246 - -0.3 4,110,246 - +0.5 4,110,246 - +0.9 4,110,263 - +1.9 4,110,272 - -0.4 4,110,477 + AO353_18675 0.68 +0.8 4,110,477 + AO353_18675 0.68 +1.5 4,110,477 + AO353_18675 0.68 -1.1 4,110,477 + AO353_18675 0.68 +0.5 4,110,477 + AO353_18675 0.68 +0.3 4,110,477 + AO353_18675 0.68 +1.6 4,110,477 + AO353_18675 0.68 +0.9 4,110,477 + AO353_18675 0.68 +1.2 4,110,477 + AO353_18675 0.68 +1.9 4,110,477 + AO353_18675 0.68 +1.4 4,110,477 + AO353_18675 0.68 +0.5 4,110,478 - AO353_18675 0.69 -1.4 4,110,478 - AO353_18675 0.69 +0.4 4,110,478 - AO353_18675 0.69 +0.9 4,110,478 - AO353_18675 0.69 +0.5 4,110,478 - AO353_18675 0.69 +1.6 4,110,478 - AO353_18675 0.69 +2.9 4,110,478 - AO353_18675 0.69 +0.9 4,110,480 - AO353_18675 0.69 +0.9 4,110,504 + AO353_18675 0.77 +0.3 4,110,504 + AO353_18675 0.77 -0.1 4,110,504 + AO353_18675 0.77 -1.1 4,110,504 + AO353_18675 0.77 +0.1 4,110,504 + AO353_18675 0.77 +0.2 4,110,504 + AO353_18675 0.77 +1.3 4,110,505 - AO353_18675 0.77 +2.3 4,110,505 - AO353_18675 0.77 +0.1 4,110,505 - AO353_18675 0.77 -1.7 4,110,505 - AO353_18675 0.77 +0.9 4,110,505 - +0.9 4,110,505 - AO353_18675 0.77 +0.6 4,110,505 - AO353_18675 0.77 -0.1 4,110,551 + +1.5 4,110,551 + -0.7 4,110,552 - +1.2 4,110,552 - -0.5 4,110,578 + -0.5 4,110,578 + +1.3 4,110,579 - +0.3 4,110,579 - -0.1 4,110,714 + +1.2 4,110,715 - -0.1 4,110,866 + AO353_18680 0.15 -1.7 4,110,867 - AO353_18680 0.15 +0.5 4,110,867 - AO353_18680 0.15 +0.2 4,110,915 + AO353_18680 0.18 -0.1 4,110,915 + AO353_18680 0.18 +0.3 4,110,915 + AO353_18680 0.18 +0.6 4,110,915 + AO353_18680 0.18 -0.1 4,110,916 - AO353_18680 0.18 +0.1 4,110,916 - AO353_18680 0.18 +2.2 4,111,185 - AO353_18680 0.33 +1.9 4,111,185 - AO353_18680 0.33 +0.6 4,111,185 - AO353_18680 0.33 -0.5 4,111,399 + AO353_18680 0.45 +0.6 4,111,400 - AO353_18680 0.45 +0.3 4,111,400 - AO353_18680 0.45 +0.3 4,111,400 - AO353_18680 0.45 -0.1 4,111,430 + AO353_18680 0.47 -1.7 4,111,430 + AO353_18680 0.47 +0.9 4,111,430 + AO353_18680 0.47 +1.2
Or see this region's nucleotide sequence