Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14000 and AO353_14005 are separated by 85 nucleotides AO353_14005 and AO353_14010 are separated by 44 nucleotides AO353_14010 and AO353_14015 are separated by 68 nucleotides
AO353_14000: AO353_14000 - GTP-binding protein, at 3,109,181 to 3,110,152
_14000
AO353_14005: AO353_14005 - GntR family transcriptional regulator, at 3,110,238 to 3,110,960
_14005
AO353_14010: AO353_14010 - GntR family transcriptional regulator, at 3,111,005 to 3,111,709
_14010
AO353_14015: AO353_14015 - C4-dicarboxylate ABC transporter, at 3,111,778 to 3,113,091
_14015
Position (kb)
3111
3112 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3110.027 kb on + strand, within AO353_14000 at 3110.161 kb on - strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.206 kb on + strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.207 kb on - strand at 3110.215 kb on + strand at 3110.239 kb on + strand at 3110.240 kb on - strand at 3110.253 kb on - strand at 3110.277 kb on + strand at 3110.278 kb on - strand at 3110.407 kb on + strand, within AO353_14005 at 3110.407 kb on + strand, within AO353_14005 at 3110.408 kb on - strand, within AO353_14005 at 3110.659 kb on - strand, within AO353_14005 at 3110.659 kb on - strand, within AO353_14005 at 3110.659 kb on - strand, within AO353_14005 at 3110.659 kb on - strand, within AO353_14005 at 3110.659 kb on - strand, within AO353_14005 at 3110.765 kb on + strand, within AO353_14005 at 3110.765 kb on + strand, within AO353_14005 at 3110.766 kb on - strand, within AO353_14005 at 3110.766 kb on - strand, within AO353_14005 at 3110.766 kb on - strand, within AO353_14005 at 3110.766 kb on - strand, within AO353_14005 at 3110.766 kb on - strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.863 kb on + strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.864 kb on - strand, within AO353_14005 at 3110.951 kb on - strand at 3110.951 kb on - strand at 3110.951 kb on - strand at 3110.951 kb on - strand at 3110.951 kb on - strand at 3110.951 kb on - strand at 3110.960 kb on + strand at 3110.961 kb on - strand at 3110.996 kb on + strand at 3110.996 kb on + strand at 3110.996 kb on + strand at 3110.996 kb on + strand at 3110.996 kb on + strand at 3110.997 kb on - strand at 3110.997 kb on - strand at 3110.997 kb on - strand at 3110.997 kb on - strand at 3110.997 kb on - strand at 3110.997 kb on - strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.006 kb on + strand at 3111.007 kb on - strand at 3111.007 kb on - strand at 3111.007 kb on - strand at 3111.180 kb on - strand, within AO353_14010 at 3111.282 kb on + strand, within AO353_14010 at 3111.282 kb on + strand, within AO353_14010 at 3111.282 kb on + strand, within AO353_14010 at 3111.282 kb on + strand, within AO353_14010 at 3111.283 kb on - strand, within AO353_14010 at 3111.283 kb on - strand, within AO353_14010 at 3111.283 kb on - strand, within AO353_14010 at 3111.417 kb on + strand, within AO353_14010 at 3111.417 kb on + strand, within AO353_14010 at 3111.417 kb on + strand, within AO353_14010 at 3111.418 kb on - strand, within AO353_14010 at 3111.574 kb on + strand, within AO353_14010 at 3111.574 kb on + strand, within AO353_14010 at 3111.574 kb on + strand, within AO353_14010 at 3111.575 kb on - strand, within AO353_14010 at 3111.686 kb on + strand at 3111.687 kb on - strand at 3111.687 kb on - strand at 3111.687 kb on - strand at 3111.732 kb on - strand at 3111.813 kb on + strand at 3111.813 kb on + strand at 3111.813 kb on + strand at 3111.814 kb on - strand at 3111.814 kb on - strand at 3111.814 kb on - strand at 3111.831 kb on - strand at 3111.831 kb on - strand at 3111.831 kb on - strand at 3111.831 kb on - strand at 3111.850 kb on + strand at 3111.850 kb on + strand at 3111.850 kb on + strand at 3111.850 kb on + strand at 3111.850 kb on + strand at 3111.850 kb on + strand at 3111.851 kb on - strand at 3111.851 kb on - strand at 3112.166 kb on + strand, within AO353_14015 at 3112.166 kb on + strand, within AO353_14015 at 3112.166 kb on + strand, within AO353_14015 at 3112.166 kb on + strand, within AO353_14015 at 3112.166 kb on + strand, within AO353_14015 at 3112.167 kb on - strand, within AO353_14015 at 3112.167 kb on - strand, within AO353_14015 at 3112.167 kb on - strand, within AO353_14015 at 3112.167 kb on - strand, within AO353_14015 at 3112.196 kb on + strand, within AO353_14015 at 3112.196 kb on + strand, within AO353_14015 at 3112.325 kb on + strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.326 kb on - strand, within AO353_14015 at 3112.409 kb on + strand, within AO353_14015 at 3112.409 kb on + strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.410 kb on - strand, within AO353_14015 at 3112.457 kb on + strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015 at 3112.458 kb on - strand, within AO353_14015
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 3,110,027 + AO353_14000 0.87 +0.9 3,110,161 - -0.2 3,110,206 + -0.8 3,110,206 + +0.2 3,110,206 + +1.2 3,110,206 + -1.0 3,110,206 + +1.2 3,110,206 + -1.8 3,110,206 + +0.8 3,110,206 + -1.8 3,110,206 + +0.4 3,110,207 - +2.2 3,110,207 - +0.7 3,110,207 - +1.4 3,110,207 - -1.0 3,110,207 - +0.2 3,110,207 - -0.4 3,110,207 - +0.5 3,110,215 + +0.2 3,110,239 + -1.4 3,110,240 - +0.6 3,110,253 - -0.1 3,110,277 + +1.4 3,110,278 - -0.3 3,110,407 + AO353_14005 0.23 -0.2 3,110,407 + AO353_14005 0.23 -0.6 3,110,408 - AO353_14005 0.24 +0.2 3,110,659 - AO353_14005 0.58 +0.9 3,110,659 - AO353_14005 0.58 -0.4 3,110,659 - AO353_14005 0.58 +1.2 3,110,659 - AO353_14005 0.58 +1.0 3,110,659 - AO353_14005 0.58 -0.2 3,110,765 + AO353_14005 0.73 -0.4 3,110,765 + AO353_14005 0.73 -0.2 3,110,766 - AO353_14005 0.73 +1.4 3,110,766 - AO353_14005 0.73 +0.2 3,110,766 - AO353_14005 0.73 -1.1 3,110,766 - AO353_14005 0.73 +0.2 3,110,766 - AO353_14005 0.73 -1.0 3,110,863 + AO353_14005 0.86 +0.4 3,110,863 + AO353_14005 0.86 -0.1 3,110,863 + AO353_14005 0.86 +0.8 3,110,863 + AO353_14005 0.86 +0.6 3,110,863 + AO353_14005 0.86 +0.8 3,110,863 + AO353_14005 0.86 -0.1 3,110,863 + AO353_14005 0.86 +0.5 3,110,863 + AO353_14005 0.86 +0.2 3,110,864 - AO353_14005 0.87 +0.2 3,110,864 - AO353_14005 0.87 +0.8 3,110,864 - AO353_14005 0.87 -0.3 3,110,864 - AO353_14005 0.87 -1.8 3,110,864 - AO353_14005 0.87 -2.4 3,110,864 - AO353_14005 0.87 +1.4 3,110,864 - AO353_14005 0.87 +0.2 3,110,864 - AO353_14005 0.87 -0.2 3,110,864 - AO353_14005 0.87 -0.8 3,110,864 - AO353_14005 0.87 -1.8 3,110,864 - AO353_14005 0.87 +0.2 3,110,951 - +0.5 3,110,951 - -1.8 3,110,951 - +1.8 3,110,951 - -0.5 3,110,951 - +0.9 3,110,951 - +0.2 3,110,960 + +0.9 3,110,961 - +0.8 3,110,996 + -1.8 3,110,996 + +0.2 3,110,996 + +0.3 3,110,996 + +0.0 3,110,996 + +1.3 3,110,997 - +0.2 3,110,997 - +1.2 3,110,997 - +0.5 3,110,997 - -0.2 3,110,997 - +0.0 3,110,997 - -0.7 3,111,006 + -0.7 3,111,006 + +1.5 3,111,006 + -0.3 3,111,006 + +0.2 3,111,006 + -0.2 3,111,006 + +3.4 3,111,006 + -0.1 3,111,007 - +1.2 3,111,007 - +0.6 3,111,007 - +2.2 3,111,180 - AO353_14010 0.25 +1.6 3,111,282 + AO353_14010 0.39 +0.2 3,111,282 + AO353_14010 0.39 +0.2 3,111,282 + AO353_14010 0.39 +1.8 3,111,282 + AO353_14010 0.39 +0.9 3,111,283 - AO353_14010 0.39 -0.7 3,111,283 - AO353_14010 0.39 +2.8 3,111,283 - AO353_14010 0.39 +0.4 3,111,417 + AO353_14010 0.58 +1.2 3,111,417 + AO353_14010 0.58 +0.5 3,111,417 + AO353_14010 0.58 +2.2 3,111,418 - AO353_14010 0.59 +1.2 3,111,574 + AO353_14010 0.81 -0.4 3,111,574 + AO353_14010 0.81 +0.2 3,111,574 + AO353_14010 0.81 +0.9 3,111,575 - AO353_14010 0.81 +1.8 3,111,686 + +0.2 3,111,687 - -1.8 3,111,687 - -0.0 3,111,687 - +1.5 3,111,732 - +2.2 3,111,813 + +0.2 3,111,813 + -1.4 3,111,813 + -0.6 3,111,814 - +1.8 3,111,814 - +0.0 3,111,814 - +1.2 3,111,831 - +0.8 3,111,831 - -0.1 3,111,831 - +1.8 3,111,831 - +0.0 3,111,850 + -0.4 3,111,850 + +0.6 3,111,850 + +0.2 3,111,850 + +0.8 3,111,850 + +1.8 3,111,850 + +0.3 3,111,851 - +0.2 3,111,851 - +0.6 3,112,166 + AO353_14015 0.30 -1.8 3,112,166 + AO353_14015 0.30 -0.6 3,112,166 + AO353_14015 0.30 +1.2 3,112,166 + AO353_14015 0.30 +0.2 3,112,166 + AO353_14015 0.30 +0.2 3,112,167 - AO353_14015 0.30 +0.4 3,112,167 - AO353_14015 0.30 +0.2 3,112,167 - AO353_14015 0.30 -1.8 3,112,167 - AO353_14015 0.30 -0.4 3,112,196 + AO353_14015 0.32 +2.1 3,112,196 + AO353_14015 0.32 -0.8 3,112,325 + AO353_14015 0.42 -1.0 3,112,326 - AO353_14015 0.42 +0.8 3,112,326 - AO353_14015 0.42 +0.2 3,112,326 - AO353_14015 0.42 -0.8 3,112,326 - AO353_14015 0.42 +1.0 3,112,326 - AO353_14015 0.42 +0.2 3,112,326 - AO353_14015 0.42 +3.0 3,112,409 + AO353_14015 0.48 -0.1 3,112,409 + AO353_14015 0.48 -0.8 3,112,410 - AO353_14015 0.48 +0.2 3,112,410 - AO353_14015 0.48 -1.6 3,112,410 - AO353_14015 0.48 +0.2 3,112,410 - AO353_14015 0.48 +1.8 3,112,410 - AO353_14015 0.48 -1.4 3,112,410 - AO353_14015 0.48 +1.8 3,112,457 + AO353_14015 0.52 -0.8 3,112,458 - AO353_14015 0.52 +1.3 3,112,458 - AO353_14015 0.52 +0.6 3,112,458 - AO353_14015 0.52 +1.2 3,112,458 - AO353_14015 0.52 +0.2 3,112,458 - AO353_14015 0.52 -0.8
Or see this region's nucleotide sequence