Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS17595

Experiment: R2A with D-Cycloserine 0.2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.2 mg/ml
4,383,912	+		CA265_RS17590	0.64	+0.2
4,383,912	+		CA265_RS17590	0.64	+1.6
4,383,913	-		CA265_RS17590	0.64	+1.0
4,383,913	-		CA265_RS17590	0.64	-0.7
4,383,913	-		CA265_RS17590	0.64	+0.6
4,383,913	-		CA265_RS17590	0.64	+0.5
4,383,963	+		CA265_RS17590	0.66	+0.1
4,383,964	-		CA265_RS17590	0.66	-0.1
4,383,991	+		CA265_RS17590	0.67	-0.4
4,383,995	+		CA265_RS17590	0.68	+1.1
4,384,148	-		CA265_RS17590	0.74	+1.0
4,384,169	+		CA265_RS17590	0.75	+0.7
4,384,203	+		CA265_RS17590	0.76	+1.3
4,384,237	+		CA265_RS17590	0.78	+0.1
4,384,237	+		CA265_RS17590	0.78	+0.2
4,384,238	-		CA265_RS17590	0.78	-0.8
4,384,268	+		CA265_RS17590	0.79	+0.1
4,384,380	-		CA265_RS17590	0.84	-1.2
4,384,406	+		CA265_RS17590	0.85	-0.1
4,384,519	+		CA265_RS17590	0.89	+0.1
4,384,520	-		CA265_RS17590	0.89	+0.5
4,384,540	-				+0.9
4,384,602	-				+0.4
4,384,623	-				-0.3
4,384,649	+				-1.4
4,384,649	+				+0.0
4,384,753	+				-0.1
4,384,770	+				-0.4
4,384,776	+				-0.1
4,384,776	+				+1.6
4,384,809	+				+0.1
4,384,810	-				+0.5
4,384,822	-				-0.2
4,384,843	+				+0.2
4,384,863	-				+1.2
4,384,875	+				+2.5
4,384,883	-				+0.8
4,384,899	+		CA265_RS17595	0.11	+1.5
4,385,073	+		CA265_RS17595	0.51	+1.2
4,385,073	+		CA265_RS17595	0.51	+1.2
4,385,074	-		CA265_RS17595	0.52	+1.4
4,385,081	-		CA265_RS17595	0.53	+1.3
4,385,097	+		CA265_RS17595	0.57	+1.2
4,385,158	+		CA265_RS17595	0.71	+0.7
4,385,158	+		CA265_RS17595	0.71	+1.6
4,385,163	+		CA265_RS17595	0.72	+0.8
4,385,164	-		CA265_RS17595	0.72	+2.0
4,385,166	+		CA265_RS17595	0.73	+1.5
4,385,182	-		CA265_RS17595	0.77	+2.3
4,385,223	+		CA265_RS17595	0.86	+0.2
4,385,232	+		CA265_RS17595	0.88	+1.8
4,385,250	+				+1.6
4,385,375	-				-0.5
4,385,379	+				+1.4
4,385,380	-				-0.3
4,385,380	-				-1.8
4,385,461	-				+0.3
4,385,461	-				-1.3
4,385,548	+		CA265_RS17600	0.15	+0.9
4,385,549	-		CA265_RS17600	0.15	-0.7
4,385,553	+		CA265_RS17600	0.15	+0.3
4,385,553	+		CA265_RS17600	0.15	-0.5
4,385,558	+		CA265_RS17600	0.16	+0.4
4,385,559	-		CA265_RS17600	0.16	-0.5
4,385,559	-		CA265_RS17600	0.16	-0.5
4,385,768	-		CA265_RS17600	0.38	+0.8
4,385,797	-		CA265_RS17600	0.41	-0.1
4,385,898	+		CA265_RS17600	0.51	-0.0
4,385,909	+		CA265_RS17600	0.52	+0.3
4,385,909	+		CA265_RS17600	0.52	+0.9
4,385,910	-		CA265_RS17600	0.52	-0.4
4,386,002	-		CA265_RS17600	0.62	+0.8
4,386,002	-		CA265_RS17600	0.62	-1.6
4,386,037	-		CA265_RS17600	0.65	-0.9
4,386,076	+		CA265_RS17600	0.69	+0.4
4,386,077	-		CA265_RS17600	0.70	-0.7
4,386,147	-		CA265_RS17600	0.77	+0.1
4,386,147	-		CA265_RS17600	0.77	-0.8
4,386,212	-		CA265_RS17600	0.84	-1.1
4,386,216	-		CA265_RS17600	0.84	-1.2
4,386,278	-				-0.9