Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03240

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
3,403,369	-		CCNA_03239	0.18	-0.4
3,403,376	-		CCNA_03239	0.18	-1.7
3,403,400	-		CCNA_03239	0.20	-2.0
3,403,413	+		CCNA_03239	0.21	-0.7
3,403,437	+		CCNA_03239	0.24	-0.1
3,403,445	-		CCNA_03239	0.24	-1.6
3,403,447	+		CCNA_03239	0.25	-1.7
3,403,455	-		CCNA_03239	0.25	-1.9
3,403,463	-		CCNA_03239	0.26	-2.5
3,403,490	+		CCNA_03239	0.28	-3.4
3,403,549	+		CCNA_03239	0.34	+0.9
3,403,554	+		CCNA_03239	0.34	-2.2
3,403,589	+		CCNA_03239	0.37	-1.4
3,403,638	+		CCNA_03239	0.42	-2.8
3,403,641	-		CCNA_03239	0.42	-2.1
3,403,646	-		CCNA_03239	0.43	-1.7
3,403,646	-		CCNA_03239	0.43	-2.0
3,403,646	-		CCNA_03239	0.43	-3.0
3,403,646	-		CCNA_03239	0.43	-0.7
3,403,646	-		CCNA_03239	0.43	-3.5
3,403,648	+		CCNA_03239	0.43	-0.9
3,403,703	+		CCNA_03239	0.48	-1.3
3,403,711	-		CCNA_03239	0.48	-0.9
3,403,711	-		CCNA_03239	0.48	-1.1
3,403,711	-		CCNA_03239	0.48	-1.6
3,403,724	-		CCNA_03239	0.50	-0.9
3,403,729	+		CCNA_03239	0.50	-2.4
3,403,732	-		CCNA_03239	0.50	-2.0
3,403,740	+		CCNA_03239	0.51	-1.3
3,403,740	+		CCNA_03239	0.51	-1.8
3,403,740	+		CCNA_03239	0.51	-1.9
3,403,740	+		CCNA_03239	0.51	-1.4
3,403,748	-		CCNA_03239	0.52	-2.3
3,403,748	-		CCNA_03239	0.52	-3.2
3,403,763	-		CCNA_03239	0.53	-1.8
3,403,787	+		CCNA_03239	0.55	-2.4
3,403,788	+		CCNA_03239	0.55	-0.1
3,403,788	+		CCNA_03239	0.55	-0.1
3,403,788	+		CCNA_03239	0.55	-0.4
3,403,796	-		CCNA_03239	0.56	-3.3
3,403,796	-		CCNA_03239	0.56	+1.9
3,403,796	-		CCNA_03239	0.56	-2.2
3,403,796	-		CCNA_03239	0.56	-0.2
3,403,796	-		CCNA_03239	0.56	-1.4
3,403,796	-		CCNA_03239	0.56	-1.4
3,403,796	-		CCNA_03239	0.56	+0.3
3,403,796	-		CCNA_03239	0.56	-1.1
3,403,796	-		CCNA_03239	0.56	-0.4
3,403,796	-		CCNA_03239	0.56	-1.4
3,403,796	-		CCNA_03239	0.56	-3.0
3,403,802	-		CCNA_03239	0.57	-1.8
3,403,818	-		CCNA_03239	0.58	-2.7
3,403,836	-		CCNA_03239	0.60	-1.9
3,403,841	-		CCNA_03239	0.60	-2.5
3,403,841	-		CCNA_03239	0.60	+0.3
3,403,841	-		CCNA_03239	0.60	-1.1
3,403,873	-		CCNA_03239	0.63	-2.6
3,403,941	-		CCNA_03239	0.69	-1.4
3,403,951	-		CCNA_03239	0.70	-0.9
3,404,053	+		CCNA_03239	0.79	-1.3
3,404,090	-		CCNA_03239	0.83	-1.4
3,404,112	-		CCNA_03239	0.85	-3.6
3,404,118	-		CCNA_03239	0.85	-3.0
3,404,133	+		CCNA_03239	0.87	+0.9
3,404,160	+		CCNA_03239	0.89	-2.3
3,404,160	+		CCNA_03239	0.89	-0.1
3,404,160	+		CCNA_03239	0.89	-1.5
3,404,160	+		CCNA_03239	0.89	-0.1
3,404,168	-		CCNA_03239	0.90	-0.1
3,404,168	-		CCNA_03239	0.90	-3.4
3,404,168	-		CCNA_03239	0.90	-1.4
3,404,168	-		CCNA_03239	0.90	-3.0
3,404,168	-		CCNA_03239	0.90	-1.8
3,404,168	-		CCNA_03239	0.90	-0.4
3,404,168	-		CCNA_03239	0.90	+0.3
3,404,184	+				-0.4
3,404,192	-				-3.0
3,404,197	-				-2.6
3,404,219	+				-2.5
3,404,237	+				-2.8
3,404,245	-				-1.7
3,404,252	+				-0.1
3,404,260	-				-2.0
3,404,274	-				-2.7
3,404,302	-				-0.1
3,404,315	-				-2.3
3,404,315	-				-2.9
3,404,325	-				-2.0
3,404,336	+				-2.3
3,404,336	+				-1.4
3,404,416	+				-1.6
3,404,424	-				-3.8
3,404,424	-				-2.0
3,404,491	-				-1.1
3,404,510	-		CCNA_03240	0.11	-3.3
3,404,531	+		CCNA_03240	0.12	-3.0
3,404,539	+		CCNA_03240	0.13	-1.3
3,404,558	+		CCNA_03240	0.14	-1.3
3,404,558	+		CCNA_03240	0.14	-1.7
3,404,566	-		CCNA_03240	0.15	-4.1
3,404,613	+		CCNA_03240	0.18	-2.2
3,404,623	+		CCNA_03240	0.19	-1.7
3,404,626	-		CCNA_03240	0.19	-2.6
3,404,644	-		CCNA_03240	0.21	-2.5
3,404,644	-		CCNA_03240	0.21	-2.8
3,404,649	-		CCNA_03240	0.21	-3.2
3,404,701	-		CCNA_03240	0.25	-4.4
3,404,717	+		CCNA_03240	0.26	-3.4
3,404,723	+		CCNA_03240	0.26	+0.9
3,404,742	+		CCNA_03240	0.28	-2.9
3,404,744	+		CCNA_03240	0.28	-2.1
3,404,861	+		CCNA_03240	0.36	-2.5
3,404,871	+		CCNA_03240	0.37	-2.7
3,404,871	+		CCNA_03240	0.37	-2.6
3,404,872	+		CCNA_03240	0.37	-1.8
3,404,879	-		CCNA_03240	0.38	-1.1
3,404,974	-		CCNA_03240	0.44	-2.3
3,404,974	-		CCNA_03240	0.44	-2.8
3,405,009	+		CCNA_03240	0.47	-2.1
3,405,017	-		CCNA_03240	0.48	-2.2
3,405,017	-		CCNA_03240	0.48	-2.0
3,405,037	-		CCNA_03240	0.49	-2.1
3,405,065	+		CCNA_03240	0.51	-3.1
3,405,103	-		CCNA_03240	0.54	-1.8
3,405,103	-		CCNA_03240	0.54	-2.2
3,405,194	+		CCNA_03240	0.60	-1.7
3,405,204	+		CCNA_03240	0.61	-2.7
3,405,206	+		CCNA_03240	0.61	-4.0
3,405,219	-		CCNA_03240	0.62	+0.3
3,405,221	-		CCNA_03240	0.62	-3.0
3,405,304	-		CCNA_03240	0.68	-1.9
3,405,304	-		CCNA_03240	0.68	-2.4
3,405,336	-		CCNA_03240	0.71	-1.0
3,405,352	+		CCNA_03240	0.72	-2.8
3,405,360	-		CCNA_03240	0.72	-2.5
3,405,408	-		CCNA_03240	0.76	-2.2
3,405,422	+		CCNA_03240	0.77	-1.4
3,405,422	+		CCNA_03240	0.77	-0.7
3,405,429	-		CCNA_03240	0.77	+0.9
3,405,430	-		CCNA_03240	0.77	-2.6
3,405,430	-		CCNA_03240	0.77	-0.9
3,405,456	+		CCNA_03240	0.79	-2.4
3,405,462	+		CCNA_03240	0.80	-3.9
3,405,463	+		CCNA_03240	0.80	-0.4
3,405,471	-		CCNA_03240	0.80	-2.5
3,405,472	+		CCNA_03240	0.80	+0.7
3,405,520	-		CCNA_03240	0.84	-2.5
3,405,520	-		CCNA_03240	0.84	-2.6
3,405,525	-		CCNA_03240	0.84	+0.6
3,405,525	-		CCNA_03240	0.84	-2.6
3,405,525	-		CCNA_03240	0.84	-2.2
3,405,530	-		CCNA_03240	0.85	-1.1
3,405,536	-		CCNA_03240	0.85	-3.4
3,405,536	-		CCNA_03240	0.85	-1.7
3,405,572	-		CCNA_03240	0.88	-1.2
3,405,577	-		CCNA_03240	0.88	-2.4
3,405,583	-		CCNA_03240	0.89	-1.3
3,405,602	+		CCNA_03240	0.90	-1.3
3,405,611	-				-3.7
3,405,639	+				-2.9
3,405,664	-				-3.3
3,405,772	+				-2.5
3,405,821	+				-0.4
3,405,829	-				-3.0
3,405,829	-				-3.0
3,405,829	-				-3.9
3,405,839	-				-2.4
3,405,846	-				+0.3
3,405,852	+				-2.2
3,405,897	-		CCNA_03241	0.11	+3.9
3,405,951	-		CCNA_03241	0.15	-0.7
3,405,953	+		CCNA_03241	0.15	-1.3
3,405,956	-		CCNA_03241	0.16	+0.1
3,405,982	+		CCNA_03241	0.17	-2.3
3,405,982	+		CCNA_03241	0.17	-2.5
3,405,982	+		CCNA_03241	0.17	-1.4
3,405,982	+		CCNA_03241	0.17	-0.7
3,405,990	-		CCNA_03241	0.18	-2.3
3,405,990	-		CCNA_03241	0.18	-0.4
3,405,990	-		CCNA_03241	0.18	-1.1
3,405,990	-		CCNA_03241	0.18	-2.7
3,406,034	+		CCNA_03241	0.21	-0.4
3,406,080	-		CCNA_03241	0.24	-0.1
3,406,086	-		CCNA_03241	0.25	-0.1
3,406,124	+		CCNA_03241	0.28	-1.3
3,406,138	-		CCNA_03241	0.29	-2.1
3,406,151	+		CCNA_03241	0.29	-1.8
3,406,151	+		CCNA_03241	0.29	-0.1
3,406,151	+		CCNA_03241	0.29	-0.9
3,406,151	+		CCNA_03241	0.29	-2.5
3,406,159	-		CCNA_03241	0.30	-1.4
3,406,159	-		CCNA_03241	0.30	-3.3
3,406,159	-		CCNA_03241	0.30	-0.7
3,406,159	-		CCNA_03241	0.30	-1.8
3,406,159	-		CCNA_03241	0.30	-2.3
3,406,164	-		CCNA_03241	0.30	-2.9
3,406,170	-		CCNA_03241	0.31	-0.9
3,406,172	+		CCNA_03241	0.31	-3.3
3,406,192	-		CCNA_03241	0.32	-0.1
3,406,218	-		CCNA_03241	0.34	-2.7
3,406,218	-		CCNA_03241	0.34	-2.5
3,406,220	+		CCNA_03241	0.34	-2.4
3,406,256	-		CCNA_03241	0.37	-2.8
3,406,262	+		CCNA_03241	0.37	-2.4
3,406,268	+		CCNA_03241	0.38	-2.7
3,406,323	-		CCNA_03241	0.42	-1.2
3,406,328	-		CCNA_03241	0.42	-2.4
3,406,337	+		CCNA_03241	0.43	-0.1
3,406,340	-		CCNA_03241	0.43	-1.8
3,406,381	-		CCNA_03241	0.46	-0.9
3,406,381	-		CCNA_03241	0.46	-4.9
3,406,436	-		CCNA_03241	0.50	+0.9
3,406,517	+		CCNA_03241	0.56	-2.0
3,406,526	-				+0.3
3,406,601	+		CCNA_03241	0.62	-1.6
3,406,643	-		CCNA_03241	0.65	-1.7
3,406,643	-		CCNA_03241	0.65	-0.7
3,406,656	+		CCNA_03241	0.66	-3.3
3,406,664	-		CCNA_03241	0.66	-1.0
3,406,669	+		CCNA_03241	0.66	-0.9
3,406,712	+		CCNA_03241	0.70	-3.7
3,406,721	-		CCNA_03241	0.70	-2.5
3,406,726	+		CCNA_03241	0.71	-2.5