Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00865 and AO353_00870 overlap by 42 nucleotides AO353_00870 and AO353_00875 are separated by 14 nucleotides AO353_00875 and AO353_00880 are separated by 20 nucleotides
AO353_00865: AO353_00865 - phosphoenolpyruvate synthase, at 195,134 to 197,509
_00865
AO353_00870: AO353_00870 - hypothetical protein, at 197,468 to 197,671
_00870
AO353_00875: AO353_00875 - transcriptional regulator, at 197,686 to 198,504
_00875
AO353_00880: AO353_00880 - 2-methylcitrate dehydratase, at 198,525 to 200,009
_00880
Position (kb) 197
198
199 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 196.719 kb on + strand, within AO353_00865 at 196.719 kb on + strand, within AO353_00865 at 196.719 kb on + strand, within AO353_00865 at 196.800 kb on + strand, within AO353_00865 at 196.801 kb on - strand, within AO353_00865 at 196.829 kb on + strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.830 kb on - strand, within AO353_00865 at 196.864 kb on + strand, within AO353_00865 at 196.911 kb on - strand, within AO353_00865 at 196.949 kb on + strand, within AO353_00865 at 196.949 kb on + strand, within AO353_00865 at 196.975 kb on + strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 196.976 kb on - strand, within AO353_00865 at 197.002 kb on - strand, within AO353_00865 at 197.036 kb on + strand, within AO353_00865 at 197.036 kb on + strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.037 kb on - strand, within AO353_00865 at 197.339 kb on + strand at 197.340 kb on - strand at 197.358 kb on + strand at 197.416 kb on + strand at 197.417 kb on - strand at 197.417 kb on - strand at 197.417 kb on - strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.462 kb on + strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.463 kb on - strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.496 kb on - strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.499 kb on + strand at 197.500 kb on - strand at 197.500 kb on - strand at 197.504 kb on + strand at 197.504 kb on + strand at 197.504 kb on + strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.505 kb on - strand at 197.525 kb on - strand, within AO353_00870 at 197.581 kb on + strand, within AO353_00870 at 197.582 kb on - strand, within AO353_00870 at 197.582 kb on - strand, within AO353_00870 at 197.601 kb on + strand, within AO353_00870 at 197.602 kb on - strand, within AO353_00870 at 197.602 kb on - strand, within AO353_00870 at 197.642 kb on + strand, within AO353_00870 at 197.642 kb on + strand at 197.643 kb on - strand, within AO353_00870 at 197.643 kb on - strand, within AO353_00870 at 197.643 kb on - strand, within AO353_00870 at 197.648 kb on - strand, within AO353_00870 at 197.669 kb on + strand at 197.707 kb on - strand at 197.707 kb on - strand at 197.727 kb on + strand at 197.728 kb on - strand at 197.728 kb on - strand at 197.775 kb on + strand, within AO353_00875 at 197.792 kb on + strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.793 kb on - strand, within AO353_00875 at 197.800 kb on + strand, within AO353_00875 at 197.800 kb on + strand, within AO353_00875 at 197.801 kb on - strand, within AO353_00875 at 197.801 kb on - strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.834 kb on + strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.835 kb on - strand, within AO353_00875 at 197.907 kb on + strand, within AO353_00875 at 197.908 kb on - strand, within AO353_00875 at 197.908 kb on - strand, within AO353_00875 at 198.004 kb on + strand, within AO353_00875 at 198.005 kb on - strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.046 kb on + strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.047 kb on - strand, within AO353_00875 at 198.109 kb on + strand, within AO353_00875 at 198.110 kb on - strand, within AO353_00875 at 198.110 kb on - strand, within AO353_00875 at 198.112 kb on + strand, within AO353_00875 at 198.113 kb on - strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.175 kb on + strand, within AO353_00875 at 198.176 kb on - strand, within AO353_00875 at 198.176 kb on - strand, within AO353_00875 at 198.358 kb on + strand, within AO353_00875 at 198.358 kb on + strand, within AO353_00875 at 198.359 kb on - strand, within AO353_00875 at 198.502 kb on + strand at 198.502 kb on + strand at 198.793 kb on + strand, within AO353_00880 at 198.806 kb on - strand, within AO353_00880 at 198.884 kb on - strand, within AO353_00880 at 198.884 kb on - strand, within AO353_00880 at 198.884 kb on - strand, within AO353_00880 at 198.884 kb on - strand, within AO353_00880 at 198.931 kb on + strand, within AO353_00880 at 198.932 kb on - strand, within AO353_00880 at 198.932 kb on - strand, within AO353_00880 at 198.932 kb on - strand, within AO353_00880 at 198.990 kb on - strand, within AO353_00880 at 198.990 kb on - strand, within AO353_00880 at 198.990 kb on - strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.144 kb on + strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.145 kb on - strand, within AO353_00880 at 199.153 kb on + strand, within AO353_00880 at 199.153 kb on + strand, within AO353_00880 at 199.176 kb on - strand, within AO353_00880 at 199.176 kb on - strand, within AO353_00880 at 199.176 kb on - strand, within AO353_00880 at 199.176 kb on - strand, within AO353_00880 at 199.176 kb on - strand, within AO353_00880 at 199.234 kb on + strand, within AO353_00880 at 199.234 kb on + strand, within AO353_00880 at 199.235 kb on - strand, within AO353_00880 at 199.235 kb on - strand at 199.375 kb on + strand, within AO353_00880 at 199.376 kb on - strand, within AO353_00880
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 196,719 + AO353_00865 0.67 +2.4 196,719 + AO353_00865 0.67 +0.3 196,719 + AO353_00865 0.67 -1.5 196,800 + AO353_00865 0.70 -0.8 196,801 - AO353_00865 0.70 -0.7 196,829 + AO353_00865 0.71 -1.8 196,830 - AO353_00865 0.71 +1.0 196,830 - AO353_00865 0.71 -0.2 196,830 - AO353_00865 0.71 +0.8 196,864 + AO353_00865 0.73 -0.7 196,911 - AO353_00865 0.75 +1.0 196,949 + AO353_00865 0.76 -2.2 196,949 + AO353_00865 0.76 +2.4 196,975 + AO353_00865 0.77 +1.0 196,976 - AO353_00865 0.78 +0.8 196,976 - AO353_00865 0.78 +0.1 196,976 - AO353_00865 0.78 -0.5 197,002 - AO353_00865 0.79 -1.2 197,036 + AO353_00865 0.80 +1.8 197,036 + AO353_00865 0.80 -0.2 197,037 - AO353_00865 0.80 +0.2 197,037 - AO353_00865 0.80 -0.2 197,037 - AO353_00865 0.80 -1.8 197,037 - AO353_00865 0.80 -1.4 197,037 - AO353_00865 0.80 -0.2 197,339 + -1.5 197,340 - -0.2 197,358 + -0.6 197,416 + +2.4 197,417 - -1.0 197,417 - +0.6 197,417 - -0.2 197,462 + -0.2 197,462 + +0.8 197,462 + +1.1 197,462 + -0.5 197,462 + +0.9 197,462 + -0.2 197,462 + +1.4 197,462 + -1.8 197,462 + +0.8 197,463 - -0.8 197,463 - +1.4 197,463 - -0.2 197,463 - -0.2 197,463 - -0.8 197,463 - -0.2 197,463 - +2.4 197,463 - +2.4 197,463 - -0.8 197,463 - +0.8 197,463 - -1.2 197,463 - +0.1 197,495 + +1.1 197,495 + -0.8 197,495 + +0.8 197,495 + -0.2 197,495 + +1.8 197,495 + +0.8 197,495 + +0.6 197,495 + +1.4 197,495 + +1.8 197,495 + +0.8 197,495 + -0.2 197,495 + -0.2 197,496 - -0.6 197,496 - -0.2 197,496 - -0.4 197,496 - +0.4 197,496 - -0.5 197,496 - -0.2 197,496 - -1.2 197,496 - -0.2 197,499 + -0.8 197,499 + +0.4 197,499 + -1.2 197,499 + -1.2 197,499 + +0.5 197,499 + +3.0 197,500 - +0.6 197,500 - +1.6 197,504 + -0.2 197,504 + +1.1 197,504 + -0.9 197,505 - -0.2 197,505 - -1.2 197,505 - +0.8 197,505 - +1.1 197,505 - -0.2 197,505 - -2.2 197,525 - AO353_00870 0.28 +0.1 197,581 + AO353_00870 0.55 -0.5 197,582 - AO353_00870 0.56 +1.4 197,582 - AO353_00870 0.56 -1.8 197,601 + AO353_00870 0.65 -0.7 197,602 - AO353_00870 0.66 -1.2 197,602 - AO353_00870 0.66 -2.5 197,642 + AO353_00870 0.85 +1.8 197,642 + -1.2 197,643 - AO353_00870 0.86 -1.2 197,643 - AO353_00870 0.86 -0.2 197,643 - AO353_00870 0.86 +1.1 197,648 - AO353_00870 0.88 -1.8 197,669 + +1.1 197,707 - -1.4 197,707 - -2.0 197,727 + +0.5 197,728 - -0.8 197,728 - +0.8 197,775 + AO353_00875 0.11 +1.4 197,792 + AO353_00875 0.13 -0.8 197,793 - AO353_00875 0.13 -2.2 197,793 - AO353_00875 0.13 +0.8 197,793 - AO353_00875 0.13 +0.8 197,800 + AO353_00875 0.14 +0.8 197,800 + AO353_00875 0.14 +0.2 197,801 - AO353_00875 0.14 -0.0 197,801 - AO353_00875 0.14 -0.6 197,834 + AO353_00875 0.18 +0.2 197,834 + AO353_00875 0.18 -0.8 197,834 + AO353_00875 0.18 -1.0 197,834 + AO353_00875 0.18 +1.4 197,834 + AO353_00875 0.18 +1.8 197,834 + AO353_00875 0.18 -1.8 197,834 + AO353_00875 0.18 +0.8 197,835 - AO353_00875 0.18 +0.4 197,835 - AO353_00875 0.18 -1.2 197,835 - AO353_00875 0.18 +0.8 197,835 - AO353_00875 0.18 -0.2 197,907 + AO353_00875 0.27 -1.2 197,908 - AO353_00875 0.27 -1.0 197,908 - AO353_00875 0.27 +0.1 198,004 + AO353_00875 0.39 -0.2 198,005 - AO353_00875 0.39 -1.2 198,046 + AO353_00875 0.44 -0.2 198,046 + AO353_00875 0.44 -1.2 198,046 + AO353_00875 0.44 +0.2 198,046 + AO353_00875 0.44 -1.2 198,046 + AO353_00875 0.44 -0.2 198,046 + AO353_00875 0.44 +0.8 198,046 + AO353_00875 0.44 +1.2 198,046 + AO353_00875 0.44 -1.2 198,046 + AO353_00875 0.44 +0.4 198,046 + AO353_00875 0.44 +0.8 198,047 - AO353_00875 0.44 -1.9 198,047 - AO353_00875 0.44 -1.2 198,047 - AO353_00875 0.44 -0.9 198,047 - AO353_00875 0.44 -0.6 198,047 - AO353_00875 0.44 -0.2 198,047 - AO353_00875 0.44 -1.8 198,109 + AO353_00875 0.52 -0.5 198,110 - AO353_00875 0.52 -0.8 198,110 - AO353_00875 0.52 -1.6 198,112 + AO353_00875 0.52 -0.2 198,113 - AO353_00875 0.52 -2.2 198,175 + AO353_00875 0.60 -1.2 198,175 + AO353_00875 0.60 -1.5 198,175 + AO353_00875 0.60 +0.8 198,175 + AO353_00875 0.60 -0.2 198,176 - AO353_00875 0.60 -2.0 198,176 - AO353_00875 0.60 -0.5 198,358 + AO353_00875 0.82 -0.2 198,358 + AO353_00875 0.82 +0.5 198,359 - AO353_00875 0.82 -0.7 198,502 + +1.6 198,502 + -0.2 198,793 + AO353_00880 0.18 -0.4 198,806 - AO353_00880 0.19 +1.4 198,884 - AO353_00880 0.24 +1.1 198,884 - AO353_00880 0.24 -1.5 198,884 - AO353_00880 0.24 -0.8 198,884 - AO353_00880 0.24 +0.8 198,931 + AO353_00880 0.27 -0.4 198,932 - AO353_00880 0.27 +0.2 198,932 - AO353_00880 0.27 +0.8 198,932 - AO353_00880 0.27 +0.8 198,990 - AO353_00880 0.31 -1.8 198,990 - AO353_00880 0.31 -1.8 198,990 - AO353_00880 0.31 +1.4 199,144 + AO353_00880 0.42 -1.5 199,144 + AO353_00880 0.42 -0.2 199,144 + AO353_00880 0.42 -0.9 199,144 + AO353_00880 0.42 +0.4 199,144 + AO353_00880 0.42 +1.1 199,144 + AO353_00880 0.42 +0.6 199,144 + AO353_00880 0.42 +0.4 199,145 - AO353_00880 0.42 +0.2 199,145 - AO353_00880 0.42 -0.8 199,145 - AO353_00880 0.42 -0.2 199,145 - AO353_00880 0.42 -0.9 199,145 - AO353_00880 0.42 -0.2 199,145 - AO353_00880 0.42 -0.2 199,145 - AO353_00880 0.42 -0.2 199,153 + AO353_00880 0.42 +1.4 199,153 + AO353_00880 0.42 +0.5 199,176 - AO353_00880 0.44 +0.8 199,176 - AO353_00880 0.44 +0.5 199,176 - AO353_00880 0.44 +0.1 199,176 - AO353_00880 0.44 -0.2 199,176 - AO353_00880 0.44 +1.0 199,234 + AO353_00880 0.48 -0.2 199,234 + AO353_00880 0.48 -0.2 199,235 - AO353_00880 0.48 -0.5 199,235 - +0.8 199,375 + AO353_00880 0.57 +0.4 199,376 - AO353_00880 0.57 -0.8
Or see this region's nucleotide sequence