Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22180 and AO353_22185 are separated by 28 nucleotides AO353_22185 and AO353_22190 overlap by 4 nucleotides AO353_22190 and AO353_22195 overlap by 4 nucleotides
AO353_22180: AO353_22180 - 2-oxobutyrate oxidase, at 4,857,864 to 4,858,901
_22180
AO353_22185: AO353_22185 - metal ABC transporter substrate-binding protein, at 4,858,930 to 4,859,745
_22185
AO353_22190: AO353_22190 - methionine ABC transporter ATP-binding protein, at 4,859,742 to 4,860,722
_22190
AO353_22195: AO353_22195 - metal ABC transporter permease, at 4,860,719 to 4,861,390
_22195
Position (kb)
4858
4859
4860 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4858.120 kb on - strand, within AO353_22180 at 4858.121 kb on + strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.122 kb on - strand, within AO353_22180 at 4858.386 kb on + strand, within AO353_22180 at 4858.387 kb on - strand, within AO353_22180 at 4858.451 kb on + strand, within AO353_22180 at 4858.451 kb on + strand, within AO353_22180 at 4858.452 kb on - strand, within AO353_22180 at 4858.452 kb on - strand, within AO353_22180 at 4858.452 kb on - strand, within AO353_22180 at 4858.601 kb on - strand, within AO353_22180 at 4858.601 kb on - strand, within AO353_22180 at 4858.623 kb on + strand, within AO353_22180 at 4858.623 kb on + strand, within AO353_22180 at 4858.815 kb on + strand at 4858.816 kb on - strand at 4858.861 kb on - strand at 4858.863 kb on + strand at 4858.863 kb on + strand at 4858.863 kb on + strand at 4858.864 kb on - strand at 4858.923 kb on + strand at 4858.923 kb on + strand at 4858.923 kb on + strand at 4858.923 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.929 kb on + strand at 4858.930 kb on - strand at 4858.930 kb on - strand at 4858.930 kb on - strand at 4858.930 kb on - strand at 4858.930 kb on - strand at 4859.053 kb on + strand, within AO353_22185 at 4859.053 kb on + strand, within AO353_22185 at 4859.053 kb on + strand, within AO353_22185 at 4859.053 kb on + strand, within AO353_22185 at 4859.054 kb on - strand, within AO353_22185 at 4859.054 kb on - strand, within AO353_22185 at 4859.054 kb on - strand, within AO353_22185 at 4859.054 kb on - strand, within AO353_22185 at 4859.119 kb on - strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.144 kb on + strand, within AO353_22185 at 4859.145 kb on - strand, within AO353_22185 at 4859.145 kb on - strand, within AO353_22185 at 4859.145 kb on - strand, within AO353_22185 at 4859.155 kb on + strand, within AO353_22185 at 4859.155 kb on + strand, within AO353_22185 at 4859.155 kb on + strand, within AO353_22185 at 4859.156 kb on - strand, within AO353_22185 at 4859.156 kb on - strand, within AO353_22185 at 4859.156 kb on - strand, within AO353_22185 at 4859.156 kb on - strand, within AO353_22185 at 4859.173 kb on + strand, within AO353_22185 at 4859.173 kb on + strand, within AO353_22185 at 4859.174 kb on - strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.251 kb on + strand, within AO353_22185 at 4859.252 kb on - strand, within AO353_22185 at 4859.252 kb on - strand, within AO353_22185 at 4859.252 kb on - strand, within AO353_22185 at 4859.252 kb on - strand, within AO353_22185 at 4859.300 kb on + strand, within AO353_22185 at 4859.341 kb on + strand, within AO353_22185 at 4859.341 kb on + strand, within AO353_22185 at 4859.342 kb on - strand, within AO353_22185 at 4859.342 kb on - strand, within AO353_22185 at 4859.510 kb on + strand, within AO353_22185 at 4859.510 kb on + strand, within AO353_22185 at 4859.511 kb on - strand, within AO353_22185 at 4859.521 kb on + strand, within AO353_22185 at 4859.522 kb on - strand, within AO353_22185 at 4859.522 kb on - strand, within AO353_22185 at 4859.522 kb on - strand, within AO353_22185 at 4859.522 kb on - strand, within AO353_22185 at 4859.522 kb on - strand, within AO353_22185 at 4859.864 kb on + strand, within AO353_22190 at 4860.074 kb on + strand, within AO353_22190 at 4860.097 kb on + strand, within AO353_22190 at 4860.106 kb on + strand, within AO353_22190 at 4860.107 kb on - strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.216 kb on + strand, within AO353_22190 at 4860.216 kb on + strand, within AO353_22190 at 4860.217 kb on - strand, within AO353_22190 at 4860.217 kb on - strand, within AO353_22190 at 4860.220 kb on + strand, within AO353_22190 at 4860.220 kb on + strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.465 kb on + strand, within AO353_22190 at 4860.466 kb on - strand, within AO353_22190 at 4860.550 kb on + strand, within AO353_22190 at 4860.550 kb on + strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.728 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,858,120 - AO353_22180 0.25 -0.4 4,858,121 + AO353_22180 0.25 -0.4 4,858,122 - AO353_22180 0.25 -0.4 4,858,122 - AO353_22180 0.25 -0.9 4,858,122 - AO353_22180 0.25 -0.4 4,858,122 - AO353_22180 0.25 -1.9 4,858,122 - AO353_22180 0.25 +0.3 4,858,122 - AO353_22180 0.25 -0.9 4,858,122 - AO353_22180 0.25 +0.4 4,858,386 + AO353_22180 0.50 +1.6 4,858,387 - AO353_22180 0.50 -2.4 4,858,451 + AO353_22180 0.57 -2.4 4,858,451 + AO353_22180 0.57 +0.6 4,858,452 - AO353_22180 0.57 -0.1 4,858,452 - AO353_22180 0.57 +1.2 4,858,452 - AO353_22180 0.57 +1.4 4,858,601 - AO353_22180 0.71 -1.8 4,858,601 - AO353_22180 0.71 +0.8 4,858,623 + AO353_22180 0.73 -0.4 4,858,623 + AO353_22180 0.73 -0.1 4,858,815 + +0.2 4,858,816 - -0.4 4,858,861 - -0.6 4,858,863 + +1.0 4,858,863 + +0.2 4,858,863 + +0.4 4,858,864 - +2.2 4,858,923 + +0.2 4,858,923 + +0.6 4,858,923 + -0.4 4,858,923 + -0.8 4,858,929 + -0.4 4,858,929 + +0.2 4,858,929 + +0.6 4,858,929 + +1.6 4,858,929 + +0.4 4,858,929 + -0.4 4,858,929 + +1.2 4,858,929 + +0.6 4,858,930 - +0.2 4,858,930 - -0.9 4,858,930 - -0.4 4,858,930 - +1.4 4,858,930 - +1.0 4,859,053 + AO353_22185 0.15 -0.4 4,859,053 + AO353_22185 0.15 +0.6 4,859,053 + AO353_22185 0.15 +1.2 4,859,053 + AO353_22185 0.15 +0.1 4,859,054 - AO353_22185 0.15 -1.2 4,859,054 - AO353_22185 0.15 -0.4 4,859,054 - AO353_22185 0.15 -0.7 4,859,054 - AO353_22185 0.15 +0.6 4,859,119 - AO353_22185 0.23 +0.6 4,859,144 + AO353_22185 0.26 +0.4 4,859,144 + AO353_22185 0.26 +0.4 4,859,144 + AO353_22185 0.26 +1.6 4,859,144 + AO353_22185 0.26 -0.9 4,859,144 + AO353_22185 0.26 +0.9 4,859,144 + AO353_22185 0.26 -0.4 4,859,144 + AO353_22185 0.26 +0.5 4,859,145 - AO353_22185 0.26 +1.1 4,859,145 - AO353_22185 0.26 +1.6 4,859,145 - AO353_22185 0.26 +0.3 4,859,155 + AO353_22185 0.28 -0.0 4,859,155 + AO353_22185 0.28 +1.2 4,859,155 + AO353_22185 0.28 +0.4 4,859,156 - AO353_22185 0.28 -0.4 4,859,156 - AO353_22185 0.28 +1.0 4,859,156 - AO353_22185 0.28 +0.6 4,859,156 - AO353_22185 0.28 -0.8 4,859,173 + AO353_22185 0.30 -0.4 4,859,173 + AO353_22185 0.30 +0.9 4,859,174 - AO353_22185 0.30 -0.8 4,859,251 + AO353_22185 0.39 +0.3 4,859,251 + AO353_22185 0.39 -0.2 4,859,251 + AO353_22185 0.39 +1.2 4,859,251 + AO353_22185 0.39 +1.2 4,859,251 + AO353_22185 0.39 -1.9 4,859,251 + AO353_22185 0.39 +1.5 4,859,251 + AO353_22185 0.39 -1.4 4,859,251 + AO353_22185 0.39 -0.8 4,859,252 - AO353_22185 0.39 +0.6 4,859,252 - AO353_22185 0.39 +1.0 4,859,252 - AO353_22185 0.39 +0.8 4,859,252 - AO353_22185 0.39 +1.0 4,859,300 + AO353_22185 0.45 +0.8 4,859,341 + AO353_22185 0.50 -0.4 4,859,341 + AO353_22185 0.50 -1.7 4,859,342 - AO353_22185 0.50 -0.4 4,859,342 - AO353_22185 0.50 +0.2 4,859,510 + AO353_22185 0.71 +0.2 4,859,510 + AO353_22185 0.71 +0.4 4,859,511 - AO353_22185 0.71 +0.4 4,859,521 + AO353_22185 0.72 +1.6 4,859,522 - AO353_22185 0.73 +0.4 4,859,522 - AO353_22185 0.73 +0.8 4,859,522 - AO353_22185 0.73 -0.4 4,859,522 - AO353_22185 0.73 -0.8 4,859,522 - AO353_22185 0.73 -1.9 4,859,864 + AO353_22190 0.12 -0.4 4,860,074 + AO353_22190 0.34 +0.3 4,860,097 + AO353_22190 0.36 +1.2 4,860,106 + AO353_22190 0.37 +0.5 4,860,107 - AO353_22190 0.37 +0.9 4,860,118 + AO353_22190 0.38 -0.4 4,860,118 + AO353_22190 0.38 +0.6 4,860,118 + AO353_22190 0.38 -1.7 4,860,216 + AO353_22190 0.48 +0.2 4,860,216 + AO353_22190 0.48 -0.1 4,860,217 - AO353_22190 0.48 -0.1 4,860,217 - AO353_22190 0.48 -0.1 4,860,220 + AO353_22190 0.49 +0.6 4,860,220 + AO353_22190 0.49 -0.1 4,860,221 - AO353_22190 0.49 +1.2 4,860,221 - AO353_22190 0.49 -2.4 4,860,221 - AO353_22190 0.49 +0.1 4,860,221 - AO353_22190 0.49 -0.4 4,860,221 - AO353_22190 0.49 +0.6 4,860,465 + AO353_22190 0.74 -0.6 4,860,466 - AO353_22190 0.74 +0.9 4,860,550 + AO353_22190 0.82 +0.2 4,860,550 + AO353_22190 0.82 -1.1 4,860,551 - AO353_22190 0.82 -2.7 4,860,551 - AO353_22190 0.82 -0.6 4,860,551 - AO353_22190 0.82 +0.3 4,860,551 - AO353_22190 0.82 -0.4 4,860,728 - -2.9
Or see this region's nucleotide sequence