Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01566 and CCNA_01567 are separated by 259 nucleotides
CCNA_01566: CCNA_01566 - hypothetical protein, at 1,682,996 to 1,683,307
_01566
CCNA_01567: CCNA_01567 - proline iminopeptidase, at 1,683,567 to 1,684,652
_01567
Position (kb)
1682
1683
1684 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1682.038 kb on + strand at 1682.044 kb on + strand at 1682.063 kb on + strand at 1682.110 kb on - strand at 1682.110 kb on - strand at 1682.110 kb on - strand at 1682.110 kb on - strand at 1682.124 kb on + strand at 1682.124 kb on + strand at 1682.148 kb on - strand at 1682.177 kb on - strand at 1682.250 kb on + strand at 1682.324 kb on + strand at 1682.332 kb on - strand at 1682.332 kb on - strand at 1682.332 kb on - strand at 1682.365 kb on + strand at 1682.366 kb on - strand at 1682.368 kb on + strand at 1682.404 kb on + strand at 1682.480 kb on + strand at 1682.480 kb on + strand at 1682.485 kb on + strand at 1682.485 kb on + strand at 1682.485 kb on + strand at 1682.488 kb on - strand at 1682.493 kb on - strand at 1682.493 kb on - strand at 1682.493 kb on - strand at 1682.556 kb on - strand at 1682.556 kb on - strand at 1682.560 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.566 kb on - strand at 1682.645 kb on + strand at 1682.645 kb on + strand at 1682.672 kb on + strand at 1682.672 kb on + strand at 1682.672 kb on + strand at 1682.680 kb on - strand at 1682.707 kb on + strand at 1682.707 kb on + strand at 1682.707 kb on + strand at 1682.714 kb on + strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.715 kb on - strand at 1682.731 kb on + strand at 1682.734 kb on - strand at 1682.739 kb on - strand at 1682.739 kb on - strand at 1682.739 kb on - strand at 1682.843 kb on + strand at 1682.843 kb on + strand at 1682.843 kb on + strand at 1682.879 kb on + strand at 1682.879 kb on + strand at 1682.879 kb on + strand at 1682.882 kb on - strand at 1682.887 kb on - strand at 1682.887 kb on - strand at 1682.922 kb on - strand at 1683.016 kb on + strand at 1683.024 kb on - strand at 1683.058 kb on + strand, within CCNA_01566 at 1683.058 kb on + strand, within CCNA_01566 at 1683.069 kb on - strand, within CCNA_01566 at 1683.128 kb on + strand, within CCNA_01566 at 1683.183 kb on - strand, within CCNA_01566 at 1683.200 kb on + strand, within CCNA_01566 at 1683.221 kb on + strand, within CCNA_01566 at 1683.249 kb on + strand, within CCNA_01566 at 1683.271 kb on - strand, within CCNA_01566 at 1683.302 kb on + strand at 1683.327 kb on + strand at 1683.337 kb on + strand at 1683.443 kb on - strand at 1683.507 kb on + strand at 1683.515 kb on - strand at 1683.515 kb on - strand at 1683.515 kb on - strand at 1683.529 kb on + strand at 1683.539 kb on + strand at 1683.547 kb on - strand at 1683.604 kb on + strand at 1683.607 kb on - strand at 1683.609 kb on + strand at 1683.617 kb on - strand at 1683.646 kb on - strand at 1683.664 kb on - strand at 1683.664 kb on - strand at 1683.688 kb on - strand, within CCNA_01567 at 1683.693 kb on + strand, within CCNA_01567 at 1683.693 kb on + strand, within CCNA_01567 at 1683.693 kb on + strand, within CCNA_01567 at 1683.701 kb on - strand, within CCNA_01567 at 1683.701 kb on - strand, within CCNA_01567 at 1683.924 kb on + strand, within CCNA_01567 at 1683.924 kb on + strand, within CCNA_01567 at 1683.986 kb on + strand, within CCNA_01567 at 1683.989 kb on - strand, within CCNA_01567 at 1683.989 kb on - strand, within CCNA_01567 at 1684.074 kb on + strand, within CCNA_01567 at 1684.074 kb on + strand, within CCNA_01567 at 1684.100 kb on + strand, within CCNA_01567 at 1684.106 kb on + strand, within CCNA_01567 at 1684.106 kb on + strand, within CCNA_01567 at 1684.109 kb on - strand, within CCNA_01567 at 1684.114 kb on - strand, within CCNA_01567 at 1684.210 kb on + strand, within CCNA_01567 at 1684.218 kb on - strand, within CCNA_01567 at 1684.233 kb on + strand, within CCNA_01567 at 1684.241 kb on - strand at 1684.241 kb on - strand, within CCNA_01567 at 1684.241 kb on - strand, within CCNA_01567 at 1684.265 kb on + strand, within CCNA_01567 at 1684.265 kb on + strand, within CCNA_01567 at 1684.265 kb on + strand, within CCNA_01567 at 1684.265 kb on + strand, within CCNA_01567 at 1684.265 kb on + strand, within CCNA_01567 at 1684.273 kb on - strand, within CCNA_01567 at 1684.273 kb on - strand, within CCNA_01567 at 1684.273 kb on - strand, within CCNA_01567 at 1684.273 kb on - strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.275 kb on + strand, within CCNA_01567 at 1684.278 kb on - strand, within CCNA_01567 at 1684.280 kb on + strand, within CCNA_01567 at 1684.283 kb on - strand, within CCNA_01567 at 1684.283 kb on - strand, within CCNA_01567 at 1684.288 kb on - strand, within CCNA_01567 at 1684.288 kb on - strand, within CCNA_01567 at 1684.288 kb on - strand, within CCNA_01567 at 1684.288 kb on - strand, within CCNA_01567 at 1684.290 kb on + strand, within CCNA_01567
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 1,682,038 + -2.1 1,682,044 + -1.7 1,682,063 + +0.7 1,682,110 - +0.5 1,682,110 - +0.9 1,682,110 - +0.4 1,682,110 - +1.3 1,682,124 + -0.8 1,682,124 + -0.9 1,682,148 - -0.3 1,682,177 - +0.9 1,682,250 + +1.3 1,682,324 + +0.7 1,682,332 - -0.9 1,682,332 - -0.5 1,682,332 - -0.1 1,682,365 + -0.4 1,682,366 - +1.3 1,682,368 + +0.4 1,682,404 + +0.3 1,682,480 + -0.1 1,682,480 + -1.3 1,682,485 + +0.3 1,682,485 + +0.4 1,682,485 + +1.1 1,682,488 - +0.5 1,682,493 - -0.7 1,682,493 - +0.8 1,682,493 - +0.3 1,682,556 - -0.1 1,682,556 - -1.2 1,682,560 - -0.5 1,682,566 - -0.9 1,682,566 - -0.8 1,682,566 - +0.5 1,682,566 - -2.4 1,682,566 - -1.3 1,682,566 - -0.0 1,682,566 - +1.3 1,682,645 + -0.4 1,682,645 + -1.5 1,682,672 + -0.3 1,682,672 + -0.7 1,682,672 + +2.7 1,682,680 - -0.1 1,682,707 + -0.3 1,682,707 + -1.2 1,682,707 + +3.0 1,682,714 + +0.2 1,682,715 - +1.2 1,682,715 - -2.1 1,682,715 - -1.0 1,682,715 - -1.1 1,682,715 - -0.5 1,682,715 - -1.4 1,682,715 - -0.8 1,682,731 + +0.2 1,682,734 - -0.8 1,682,739 - -0.9 1,682,739 - +0.0 1,682,739 - +0.5 1,682,843 + -2.1 1,682,843 + -0.3 1,682,843 + -1.3 1,682,879 + +3.5 1,682,879 + -1.6 1,682,879 + -0.3 1,682,882 - +0.6 1,682,887 - -1.7 1,682,887 - -0.9 1,682,922 - -0.2 1,683,016 + +0.3 1,683,024 - +0.2 1,683,058 + CCNA_01566 0.20 -0.9 1,683,058 + CCNA_01566 0.20 -1.7 1,683,069 - CCNA_01566 0.23 +1.3 1,683,128 + CCNA_01566 0.42 -0.9 1,683,183 - CCNA_01566 0.60 -0.1 1,683,200 + CCNA_01566 0.65 -1.4 1,683,221 + CCNA_01566 0.72 -1.6 1,683,249 + CCNA_01566 0.81 -0.3 1,683,271 - CCNA_01566 0.88 +0.8 1,683,302 + -1.3 1,683,327 + -0.3 1,683,337 + -0.1 1,683,443 - -0.7 1,683,507 + -1.3 1,683,515 - +0.8 1,683,515 - -1.9 1,683,515 - -1.0 1,683,529 + -1.8 1,683,539 + +1.2 1,683,547 - -0.9 1,683,604 + +1.5 1,683,607 - +2.3 1,683,609 + -0.7 1,683,617 - +0.1 1,683,646 - -1.6 1,683,664 - -0.0 1,683,664 - -0.2 1,683,688 - CCNA_01567 0.11 +1.1 1,683,693 + CCNA_01567 0.12 -1.1 1,683,693 + CCNA_01567 0.12 +2.5 1,683,693 + CCNA_01567 0.12 -0.9 1,683,701 - CCNA_01567 0.12 +0.3 1,683,701 - CCNA_01567 0.12 -0.3 1,683,924 + CCNA_01567 0.33 +0.4 1,683,924 + CCNA_01567 0.33 -2.2 1,683,986 + CCNA_01567 0.39 -1.3 1,683,989 - CCNA_01567 0.39 -0.3 1,683,989 - CCNA_01567 0.39 +0.5 1,684,074 + CCNA_01567 0.47 +1.1 1,684,074 + CCNA_01567 0.47 -1.7 1,684,100 + CCNA_01567 0.49 -0.3 1,684,106 + CCNA_01567 0.50 -0.5 1,684,106 + CCNA_01567 0.50 -1.3 1,684,109 - CCNA_01567 0.50 +0.2 1,684,114 - CCNA_01567 0.50 +1.5 1,684,210 + CCNA_01567 0.59 -0.5 1,684,218 - CCNA_01567 0.60 +0.5 1,684,233 + CCNA_01567 0.61 -0.4 1,684,241 - +2.5 1,684,241 - CCNA_01567 0.62 +0.9 1,684,241 - CCNA_01567 0.62 -0.7 1,684,265 + CCNA_01567 0.64 -1.2 1,684,265 + CCNA_01567 0.64 -0.4 1,684,265 + CCNA_01567 0.64 +0.5 1,684,265 + CCNA_01567 0.64 -3.3 1,684,265 + CCNA_01567 0.64 +2.4 1,684,273 - CCNA_01567 0.65 -1.8 1,684,273 - CCNA_01567 0.65 +0.5 1,684,273 - CCNA_01567 0.65 -1.7 1,684,273 - CCNA_01567 0.65 +2.5 1,684,275 + CCNA_01567 0.65 +0.4 1,684,275 + CCNA_01567 0.65 +0.9 1,684,275 + CCNA_01567 0.65 +0.9 1,684,275 + CCNA_01567 0.65 -1.9 1,684,275 + CCNA_01567 0.65 -0.2 1,684,275 + CCNA_01567 0.65 -0.7 1,684,275 + CCNA_01567 0.65 -0.1 1,684,275 + CCNA_01567 0.65 -1.6 1,684,275 + CCNA_01567 0.65 +0.6 1,684,278 - CCNA_01567 0.65 +0.2 1,684,280 + CCNA_01567 0.66 +0.5 1,684,283 - CCNA_01567 0.66 +0.1 1,684,283 - CCNA_01567 0.66 +0.5 1,684,288 - CCNA_01567 0.66 +0.3 1,684,288 - CCNA_01567 0.66 -1.8 1,684,288 - CCNA_01567 0.66 +0.9 1,684,288 - CCNA_01567 0.66 -0.3 1,684,290 + CCNA_01567 0.67 +1.4
Or see this region's nucleotide sequence