Strain Fitness in Shewanella amazonensis SB2B around Sama_1656

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,020,037	-		Sama_1655	0.28	+1.0
2,020,066	+		Sama_1655	0.30	+1.2
2,020,066	+		Sama_1655	0.30	-0.5
2,020,066	+		Sama_1655	0.30	+1.2
2,020,066	+		Sama_1655	0.30	+0.6
2,020,067	-		Sama_1655	0.31	+0.0
2,020,067	-		Sama_1655	0.31	+1.4
2,020,078	+		Sama_1655	0.32	+0.8
2,020,145	+		Sama_1655	0.38	+2.4
2,020,145	+		Sama_1655	0.38	+0.8
2,020,172	-		Sama_1655	0.40	-0.2
2,020,174	+		Sama_1655	0.40	+1.5
2,020,205	+		Sama_1655	0.43	+0.3
2,020,206	-		Sama_1655	0.43	+0.6
2,020,206	-		Sama_1655	0.43	-0.6
2,020,320	+		Sama_1655	0.53	+1.5
2,020,320	+		Sama_1655	0.53	+1.6
2,020,323	+		Sama_1655	0.54	-1.0
2,020,323	+		Sama_1655	0.54	+1.5
2,020,324	-		Sama_1655	0.54	+0.0
2,020,338	+		Sama_1655	0.55	+0.8
2,020,338	+		Sama_1655	0.55	+0.7
2,020,339	-		Sama_1655	0.55	+0.2
2,020,435	+		Sama_1655	0.64	+1.3
2,020,435	+		Sama_1655	0.64	+0.5
2,020,436	-		Sama_1655	0.64	+0.2
2,020,522	+		Sama_1655	0.72	+1.8
2,020,643	+		Sama_1655	0.83	+0.2
2,020,643	+		Sama_1655	0.83	+1.3
2,020,644	-		Sama_1655	0.83	+2.4
2,020,651	+		Sama_1655	0.84	+1.4
2,020,687	+		Sama_1655	0.87	+0.4
2,020,687	+		Sama_1655	0.87	-0.4
2,020,687	+		Sama_1655	0.87	-0.1
2,020,688	-		Sama_1655	0.87	+1.2
2,020,776	+				-1.5
2,020,882	+				+0.5
2,020,972	+				-0.2
2,020,972	+				-0.2
2,020,973	-				+0.4
2,020,986	+				-0.5
2,020,987	-				+1.0
2,021,006	+				+0.9
2,021,007	-				-1.1
2,021,042	+				-0.5
2,021,042	+				-0.2
2,021,043	-				+1.3
2,021,043	-				-1.8
2,021,046	+				-1.0
2,021,086	+				-0.8
2,021,090	+				+0.2
2,021,130	+				-2.4
2,021,130	+				-1.0
2,021,131	-				-1.3
2,021,199	+				-1.4
2,021,200	-				-0.8
2,021,237	+				+0.2
2,021,237	+				-1.2
2,021,238	-				+0.6
2,021,238	-				-0.4
2,021,241	+				+0.0
2,021,241	+				+3.8
2,021,241	+				+0.1
2,021,242	-				-1.2
2,021,242	-				-2.1
2,021,242	-				-1.8
2,021,242	-				+1.6
2,021,309	+		Sama_1656	0.12	-1.0
2,021,309	+		Sama_1656	0.12	+0.6
2,021,384	+		Sama_1656	0.15	+0.0
2,021,385	-		Sama_1656	0.15	+1.0
2,021,385	-		Sama_1656	0.15	+0.2
2,021,404	-		Sama_1656	0.16	-1.9
2,021,404	-		Sama_1656	0.16	-0.3
2,021,632	-		Sama_1656	0.26	-0.8
2,021,632	-		Sama_1656	0.26	-1.5
2,021,689	-		Sama_1656	0.28	+1.2
2,021,689	-		Sama_1656	0.28	-0.4
2,021,690	+		Sama_1656	0.28	+0.2
2,021,691	-		Sama_1656	0.28	+1.8
2,021,691	-		Sama_1656	0.28	+1.8
2,021,722	+		Sama_1656	0.29	+0.5
2,021,727	+		Sama_1656	0.29	-1.1
2,021,750	+		Sama_1656	0.30	+0.8
2,021,750	+		Sama_1656	0.30	+0.5
2,021,750	+		Sama_1656	0.30	-0.4
2,021,751	-		Sama_1656	0.30	+0.8
2,021,771	+		Sama_1656	0.31	-0.6
2,021,853	+		Sama_1656	0.35	-1.0
2,021,853	+		Sama_1656	0.35	+0.2
2,021,853	+		Sama_1656	0.35	+1.5
2,021,853	+		Sama_1656	0.35	+1.5
2,021,854	-		Sama_1656	0.35	-0.5
2,021,854	-		Sama_1656	0.35	-1.1
2,021,854	-		Sama_1656	0.35	+1.3
2,021,854	-		Sama_1656	0.35	-1.2
2,021,854	-		Sama_1656	0.35	-0.2
2,021,917	-		Sama_1656	0.37	-0.2
2,021,917	-		Sama_1656	0.37	+0.8
2,021,938	-		Sama_1656	0.38	-1.6
2,022,052	-		Sama_1656	0.43	-0.2
2,022,052	-		Sama_1656	0.43	+0.4
2,022,095	-		Sama_1656	0.44	-0.9
2,022,095	-		Sama_1656	0.44	+0.8
2,022,095	-		Sama_1656	0.44	-1.5
2,022,276	-		Sama_1656	0.52	-0.4
2,022,301	+		Sama_1656	0.53	-1.0
2,022,301	+		Sama_1656	0.53	+0.8
2,022,301	+		Sama_1656	0.53	-1.2
2,022,301	+		Sama_1656	0.53	+0.2
2,022,301	+		Sama_1656	0.53	-2.4
2,022,301	+		Sama_1656	0.53	-2.4
2,022,302	-		Sama_1656	0.53	+1.0
2,022,302	-		Sama_1656	0.53	-0.8
2,022,307	-		Sama_1656	0.53	-0.2
2,022,580	+		Sama_1656	0.64	-1.2
2,022,580	+		Sama_1656	0.64	+0.0
2,022,581	-		Sama_1656	0.64	-1.0
2,022,583	+		Sama_1656	0.64	-0.9
2,022,583	+		Sama_1656	0.64	+0.0
2,022,584	-		Sama_1656	0.64	-1.4
2,022,584	-		Sama_1656	0.64	-1.0
2,022,584	-		Sama_1656	0.64	+0.8
2,022,584	-		Sama_1656	0.64	-1.4
2,022,584	-		Sama_1656	0.64	-0.4
2,022,584	-		Sama_1656	0.64	+0.8
2,022,622	-		Sama_1656	0.66	+1.4
2,022,712	-		Sama_1656	0.70	-0.4
2,022,842	+		Sama_1656	0.75	+0.5
2,022,842	+		Sama_1656	0.75	-1.1
2,022,842	+		Sama_1656	0.75	-0.1
2,022,843	-		Sama_1656	0.75	-0.3
2,022,939	+		Sama_1656	0.79	-1.0
2,022,968	-		Sama_1656	0.80	-0.2
2,023,044	+		Sama_1656	0.83	+0.3
2,023,061	+		Sama_1656	0.84	-0.6
2,023,117	-		Sama_1656	0.86	+1.8
2,023,163	+		Sama_1656	0.88	+0.8
2,023,163	+		Sama_1656	0.88	-1.2
2,023,163	+		Sama_1656	0.88	+0.6
2,023,163	+		Sama_1656	0.88	+0.8
2,023,163	+		Sama_1656	0.88	-1.4
2,023,163	+		Sama_1656	0.88	-0.6
2,023,163	+		Sama_1656	0.88	+0.2
2,023,163	+		Sama_1656	0.88	+0.6
2,023,164	-		Sama_1656	0.88	-1.0
2,023,164	-		Sama_1656	0.88	+0.0
2,023,164	-		Sama_1656	0.88	-0.8
2,023,164	-		Sama_1656	0.88	+0.4
2,023,164	-		Sama_1656	0.88	-1.5
2,023,164	-		Sama_1656	0.88	-0.8
2,023,164	-		Sama_1656	0.88	+0.2
2,023,199	+		Sama_1656	0.89	-1.4
2,023,230	+				-1.0
2,023,230	+				-1.6
2,023,231	-				+0.4
2,023,238	+				+0.9
2,023,238	+				+0.6
2,023,238	+				-2.3
2,023,238	+				+1.8
2,023,239	-				-0.2
2,023,239	-				-0.5
2,023,239	-				+0.8
2,023,253	+				-1.4
2,023,253	+				-0.2
2,023,253	+				-1.0
2,023,254	-				-0.1
2,023,254	-				-0.8
2,023,254	-				+0.6
2,023,273	+				-0.4
2,023,273	+				+0.5
2,023,274	-				+0.2
2,023,475	+				+0.8
2,023,479	+				+0.4
2,023,479	+				+0.8
2,023,479	+				+0.2
2,023,479	+				+1.8
2,023,479	+				-0.6
2,023,480	-				+1.2
2,023,535	+				-0.7
2,023,535	+				-1.4
2,023,535	+				+0.7
2,023,538	+				-2.1
2,023,556	+				+1.2
2,023,556	+				+1.2
2,023,587	+				+1.8
2,023,587	+				+1.0
2,023,587	+				+0.8
2,023,587	+				+0.0
2,023,588	-				+0.4
2,023,588	-				-1.6
2,023,588	-				-0.9
2,023,588	-				+1.1
2,023,588	-				+1.8
2,023,588	-				+0.0
2,023,588	-				-0.4
2,023,590	-				+1.3
2,023,590	-				+1.0
2,023,686	+		Sama_1657	0.13	+2.0
2,023,686	+		Sama_1657	0.13	+0.1
2,023,686	+		Sama_1657	0.13	+2.1
2,023,687	-		Sama_1657	0.13	-0.2
2,023,687	-		Sama_1657	0.13	+1.3
2,023,687	-		Sama_1657	0.13	-1.0
2,023,687	-		Sama_1657	0.13	-1.0
2,023,687	-		Sama_1657	0.13	+0.5
2,023,687	-		Sama_1657	0.13	+0.6
2,023,687	-		Sama_1657	0.13	+0.5
2,023,687	-		Sama_1657	0.13	+1.4
2,023,687	-		Sama_1657	0.13	+0.6
2,023,687	-		Sama_1657	0.13	-1.2
2,023,687	-		Sama_1657	0.13	+0.2
2,023,688	+		Sama_1657	0.13	+0.7
2,023,688	+		Sama_1657	0.13	+0.8
2,023,689	-		Sama_1657	0.14	-0.8
2,023,689	-		Sama_1657	0.14	+0.4
2,023,689	-		Sama_1657	0.14	-0.1
2,023,689	-		Sama_1657	0.14	+0.8
2,023,689	-		Sama_1657	0.14	-1.4
2,023,689	-		Sama_1657	0.14	+1.2
2,023,732	-		Sama_1657	0.16	+0.2
2,023,812	+		Sama_1657	0.21	+0.0
2,023,813	-		Sama_1657	0.22	+0.4
2,023,877	+		Sama_1657	0.26	-0.4
2,023,877	+		Sama_1657	0.26	+1.8
2,023,878	-		Sama_1657	0.26	+0.5
2,023,882	+		Sama_1657	0.26	+1.5
2,023,882	+		Sama_1657	0.26	+0.6
2,023,883	-		Sama_1657	0.26	+1.8
2,023,883	-		Sama_1657	0.26	+0.5
2,023,883	-		Sama_1657	0.26	-0.2
2,023,883	-		Sama_1657	0.26	+0.8
2,023,883	-		Sama_1657	0.26	+0.0
2,023,883	-		Sama_1657	0.26	+2.1
2,023,883	-		Sama_1657	0.26	-0.5
2,023,883	-		Sama_1657	0.26	+1.7
2,023,883	-		Sama_1657	0.26	+0.4
2,023,883	-		Sama_1657	0.26	-0.2
2,023,929	+		Sama_1657	0.29	+0.8
2,023,929	+		Sama_1657	0.29	+1.8
2,023,929	+		Sama_1657	0.29	-0.5
2,023,929	+		Sama_1657	0.29	+0.8
2,023,929	+		Sama_1657	0.29	+6.9
2,023,972	-		Sama_1657	0.32	+0.0
2,023,972	-		Sama_1657	0.32	-0.5
2,024,007	+		Sama_1657	0.34	+1.4
2,024,007	+		Sama_1657	0.34	+0.6
2,024,008	-		Sama_1657	0.34	+0.4
2,024,008	-		Sama_1657	0.34	+1.6
2,024,032	-		Sama_1657	0.36	+0.2
2,024,120	+		Sama_1657	0.41	+0.2
2,024,121	-		Sama_1657	0.41	-0.2
2,024,121	-		Sama_1657	0.41	-0.4
2,024,172	-		Sama_1657	0.45	+1.8
2,024,188	-		Sama_1657	0.46	+0.6
2,024,213	+		Sama_1657	0.47	-1.6
2,024,213	+		Sama_1657	0.47	+0.8
2,024,214	-		Sama_1657	0.47	+0.6
2,024,214	-		Sama_1657	0.47	+1.8
2,024,232	+		Sama_1657	0.48	+0.8
2,024,232	+		Sama_1657	0.48	+0.0
2,024,233	-		Sama_1657	0.48	+1.2
2,024,233	-		Sama_1657	0.48	+1.5
2,024,233	-		Sama_1657	0.48	+0.8
2,024,233	-		Sama_1657	0.48	-1.0
2,024,233	-		Sama_1657	0.48	+1.8
2,024,297	+		Sama_1657	0.53	-0.5
2,024,329	+		Sama_1657	0.55	+0.6
2,024,397	+		Sama_1657	0.59	+1.2
2,024,458	-		Sama_1657	0.63	-0.0
2,024,458	-		Sama_1657	0.63	+1.0