Strain Fitness in Shewanella oneidensis MR-1 around SO3207

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
3,345,764	-	cheB-3	SO3206	0.20	+1.0
3,345,800	-	cheB-3	SO3206	0.23	+0.7
3,345,840	-				+2.8
3,345,996	+	cheB-3	SO3206	0.41	-0.1
3,346,075	-	cheB-3	SO3206	0.48	-0.3
3,346,101	+	cheB-3	SO3206	0.50	+0.2
3,346,209	-	cheB-3	SO3206	0.60	+0.5
3,346,369	+	cheB-3	SO3206	0.74	-0.2
3,346,378	+	cheB-3	SO3206	0.75	-0.3
3,346,421	+	cheB-3	SO3206	0.79	-1.2
3,346,434	-	cheB-3	SO3206	0.80	-1.4
3,346,475	+	cheB-3	SO3206	0.83	+0.4
3,346,527	+	cheB-3	SO3206	0.88	-1.2
3,346,535	-	cheB-3	SO3206	0.89	-0.6
3,346,730	-				-2.3
3,346,858	-				+0.2
3,346,861	+				-1.7
3,346,873	-				-1.4
3,346,944	+		SO3207	0.12	-0.6
3,346,993	-		SO3207	0.14	-1.4
3,347,014	-		SO3207	0.15	-1.8
3,347,144	+		SO3207	0.20	-2.2
3,347,152	-		SO3207	0.21	-2.8
3,347,152	-		SO3207	0.21	-0.5
3,347,172	-		SO3207	0.22	-2.2
3,347,172	-		SO3207	0.22	-1.6
3,347,185	-		SO3207	0.22	-1.1
3,347,447	+		SO3207	0.34	-1.3
3,347,447	+		SO3207	0.34	+0.9
3,347,455	-		SO3207	0.34	-1.3
3,347,455	-		SO3207	0.34	-0.7
3,347,504	+		SO3207	0.36	-1.1
3,347,507	-		SO3207	0.36	-2.1
3,348,181	-		SO3207	0.66	-0.4
3,348,325	-		SO3207	0.72	-0.4
3,348,366	-		SO3207	0.74	-0.6
3,348,466	+		SO3207	0.78	-1.1
3,348,575	-		SO3207	0.83	-1.2
3,348,578	-		SO3207	0.83	-2.0
3,348,707	+		SO3207	0.89	-1.7
3,348,712	+		SO3207	0.89	-1.4
3,348,712	+		SO3207	0.89	-0.9
3,348,720	-		SO3207	0.90	-0.9
3,348,720	-		SO3207	0.90	-1.5
3,348,720	-		SO3207	0.90	-1.4
3,348,762	+				-2.3
3,348,782	-				-0.8
3,348,799	+				-0.9
3,348,799	+				-0.7
3,348,840	+				-1.9
3,348,922	+				-1.5
3,349,009	+				-2.4
3,349,017	-				-0.8
3,349,017	-				+0.7
3,349,017	-				+0.1
3,349,017	-				-0.1
3,349,113	+	cheZ	SO3208	0.19	-1.4
3,349,302	+	cheZ	SO3208	0.45	-1.1
3,349,656	-				-0.2
3,349,666	-				-0.2
3,349,689	+				-2.8
3,349,712	+				-3.5
3,349,713	-				+0.3
3,349,720	-				-1.2
3,349,767	-	cheY-3	SO3209	0.11	-2.4
3,349,789	+	cheY-3	SO3209	0.17	-2.5
3,349,899	+	cheY-3	SO3209	0.46	-2.6