Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3150 and Dsui_3151 are separated by 25 nucleotides Dsui_3151 and Dsui_3152 overlap by 4 nucleotides Dsui_3152 and Dsui_3153 are separated by 140 nucleotides
Dsui_3150: Dsui_3150 - electron transfer flavoprotein, beta subunit, at 3,372,031 to 3,372,915
_3150
Dsui_3151: Dsui_3151 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,372,941 to 3,373,630
_3151
Dsui_3152: Dsui_3152 - histidine kinase, at 3,373,627 to 3,375,126
_3152
Dsui_3153: Dsui_3153 - TRAP transporter, DctM subunit, at 3,375,267 to 3,376,550
_3153
Position (kb)
3373
3374
3375
3376 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3372.727 kb on - strand, within Dsui_3150 at 3372.744 kb on + strand, within Dsui_3150 at 3372.817 kb on - strand, within Dsui_3150 at 3373.008 kb on - strand at 3373.045 kb on + strand at 3373.049 kb on - strand, within Dsui_3151 at 3373.294 kb on - strand, within Dsui_3151 at 3373.782 kb on - strand, within Dsui_3152 at 3373.808 kb on - strand at 3373.871 kb on - strand, within Dsui_3152 at 3373.909 kb on - strand, within Dsui_3152 at 3373.958 kb on - strand, within Dsui_3152 at 3374.074 kb on - strand, within Dsui_3152 at 3374.141 kb on + strand at 3374.195 kb on + strand at 3374.251 kb on + strand at 3374.256 kb on + strand at 3374.258 kb on - strand, within Dsui_3152 at 3374.259 kb on - strand, within Dsui_3152 at 3374.304 kb on + strand at 3374.312 kb on - strand, within Dsui_3152 at 3374.320 kb on + strand at 3374.340 kb on + strand at 3374.376 kb on + strand at 3374.431 kb on + strand at 3374.481 kb on - strand, within Dsui_3152 at 3374.529 kb on - strand, within Dsui_3152 at 3374.538 kb on - strand, within Dsui_3152 at 3374.588 kb on - strand, within Dsui_3152 at 3374.588 kb on - strand, within Dsui_3152 at 3374.610 kb on - strand at 3374.756 kb on - strand, within Dsui_3152 at 3374.797 kb on - strand, within Dsui_3152 at 3374.958 kb on - strand, within Dsui_3152 at 3375.080 kb on - strand at 3375.096 kb on + strand at 3375.160 kb on + strand at 3375.170 kb on + strand at 3375.231 kb on - strand at 3375.271 kb on + strand at 3375.282 kb on + strand at 3375.668 kb on + strand, within Dsui_3153 at 3375.693 kb on - strand, within Dsui_3153 at 3375.714 kb on + strand, within Dsui_3153 at 3375.732 kb on - strand, within Dsui_3153 at 3375.807 kb on + strand, within Dsui_3153 at 3375.823 kb on - strand, within Dsui_3153 at 3375.977 kb on + strand, within Dsui_3153
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 3,372,727 - Dsui_3150 0.79 -1.2 3,372,744 + Dsui_3150 0.81 -1.9 3,372,817 - Dsui_3150 0.89 -1.6 3,373,008 - +0.2 3,373,045 + +0.5 3,373,049 - Dsui_3151 0.16 +0.8 3,373,294 - Dsui_3151 0.51 +0.5 3,373,782 - Dsui_3152 0.10 +0.7 3,373,808 - +0.9 3,373,871 - Dsui_3152 0.16 +0.1 3,373,909 - Dsui_3152 0.19 -0.5 3,373,958 - Dsui_3152 0.22 +1.2 3,374,074 - Dsui_3152 0.30 +0.3 3,374,141 + +0.5 3,374,195 + +1.5 3,374,251 + +1.5 3,374,256 + +0.5 3,374,258 - Dsui_3152 0.42 -0.1 3,374,259 - Dsui_3152 0.42 +1.4 3,374,304 + +1.5 3,374,312 - Dsui_3152 0.46 -0.1 3,374,320 + +1.5 3,374,340 + +1.5 3,374,376 + -1.1 3,374,431 + +1.5 3,374,481 - Dsui_3152 0.57 +0.8 3,374,529 - Dsui_3152 0.60 -0.7 3,374,538 - Dsui_3152 0.61 +0.9 3,374,588 - Dsui_3152 0.64 -1.3 3,374,588 - Dsui_3152 0.64 +0.0 3,374,610 - +0.8 3,374,756 - Dsui_3152 0.75 -0.7 3,374,797 - Dsui_3152 0.78 +0.3 3,374,958 - Dsui_3152 0.89 +2.0 3,375,080 - -0.1 3,375,096 + -0.4 3,375,160 + -0.3 3,375,170 + -0.3 3,375,231 - +0.5 3,375,271 + +0.5 3,375,282 + +0.6 3,375,668 + Dsui_3153 0.31 -0.6 3,375,693 - Dsui_3153 0.33 -0.0 3,375,714 + Dsui_3153 0.35 +0.7 3,375,732 - Dsui_3153 0.36 -1.1 3,375,807 + Dsui_3153 0.42 -0.7 3,375,823 - Dsui_3153 0.43 +0.3 3,375,977 + Dsui_3153 0.55 -1.0
Or see this region's nucleotide sequence