Strain Fitness in Dechlorosoma suillum PS around Dsui_2581

Experiment: Anaero. lactate (C), nitrate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2580 and Dsui_2581 are separated by 574 nucleotides Dsui_2580: Dsui_2580 - hypothetical protein, at 2,731,366 to 2,731,740 _2580 Dsui_2581: Dsui_2581 - putative HD superfamily hydrolase, at 2,732,315 to 2,734,300 _2581 Position (kb) 2732 2733 2734 2735Strain fitness (log2 ratio) -2 -1 0 1at 2731.331 kb on + strandat 2731.349 kb on + strandat 2731.350 kb on + strandat 2731.360 kb on - strandat 2731.362 kb on + strandat 2731.388 kb on - strandat 2731.397 kb on + strandat 2731.397 kb on + strandat 2731.405 kb on + strand, within Dsui_2580at 2731.413 kb on - strand, within Dsui_2580at 2731.430 kb on + strand, within Dsui_2580at 2731.430 kb on + strand, within Dsui_2580at 2731.442 kb on + strand, within Dsui_2580at 2731.445 kb on - strand, within Dsui_2580at 2731.450 kb on - strandat 2731.450 kb on - strand, within Dsui_2580at 2731.450 kb on - strand, within Dsui_2580at 2731.474 kb on + strand, within Dsui_2580at 2731.549 kb on - strand, within Dsui_2580at 2731.554 kb on - strandat 2731.559 kb on + strand, within Dsui_2580at 2731.559 kb on + strand, within Dsui_2580at 2731.559 kb on + strand, within Dsui_2580at 2731.599 kb on + strand, within Dsui_2580at 2731.616 kb on + strand, within Dsui_2580at 2731.624 kb on - strand, within Dsui_2580at 2731.624 kb on - strand, within Dsui_2580at 2731.633 kb on + strand, within Dsui_2580at 2731.638 kb on + strand, within Dsui_2580at 2731.638 kb on + strand, within Dsui_2580at 2731.638 kb on + strand, within Dsui_2580at 2731.646 kb on - strand, within Dsui_2580at 2731.646 kb on - strand, within Dsui_2580at 2731.648 kb on + strand, within Dsui_2580at 2731.648 kb on + strand, within Dsui_2580at 2731.649 kb on - strand, within Dsui_2580at 2731.656 kb on - strand, within Dsui_2580at 2731.658 kb on + strand, within Dsui_2580at 2731.667 kb on - strandat 2731.713 kb on - strandat 2731.720 kb on + strandat 2731.727 kb on - strandat 2731.747 kb on + strandat 2731.804 kb on + strandat 2731.804 kb on + strandat 2731.804 kb on + strandat 2731.804 kb on + strandat 2731.804 kb on + strandat 2731.804 kb on + strandat 2731.807 kb on - strandat 2731.812 kb on - strandat 2731.812 kb on - strandat 2731.812 kb on - strandat 2731.845 kb on + strandat 2731.845 kb on - strandat 2731.846 kb on + strandat 2731.875 kb on + strandat 2731.875 kb on + strandat 2731.896 kb on + strandat 2731.896 kb on + strandat 2731.901 kb on + strandat 2731.901 kb on + strandat 2731.948 kb on + strandat 2731.962 kb on + strandat 2731.963 kb on + strandat 2731.970 kb on + strandat 2731.970 kb on - strandat 2731.979 kb on - strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.981 kb on + strandat 2731.984 kb on - strandat 2731.989 kb on - strandat 2731.989 kb on - strandat 2731.989 kb on - strandat 2731.991 kb on + strandat 2731.999 kb on - strandat 2732.044 kb on - strandat 2732.052 kb on - strandat 2732.054 kb on + strandat 2732.056 kb on + strandat 2732.056 kb on + strandat 2732.108 kb on + strandat 2732.110 kb on + strandat 2732.112 kb on - strandat 2732.117 kb on + strandat 2732.117 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.122 kb on + strandat 2732.130 kb on - strandat 2732.130 kb on - strandat 2732.130 kb on - strandat 2732.130 kb on - strandat 2732.130 kb on - strandat 2732.141 kb on + strandat 2732.184 kb on + strandat 2732.199 kb on + strandat 2732.208 kb on + strandat 2732.218 kb on + strandat 2732.261 kb on + strandat 2732.299 kb on + strandat 2732.304 kb on + strandat 2732.306 kb on + strandat 2732.312 kb on - strandat 2732.320 kb on - strandat 2732.320 kb on - strandat 2732.321 kb on - strandat 2732.339 kb on + strandat 2732.340 kb on - strandat 2732.352 kb on + strandat 2732.370 kb on + strandat 2732.378 kb on + strandat 2732.383 kb on + strandat 2732.391 kb on - strandat 2732.398 kb on + strandat 2732.398 kb on + strandat 2732.398 kb on + strandat 2732.406 kb on - strandat 2732.406 kb on - strandat 2732.421 kb on - strandat 2732.464 kb on - strandat 2732.518 kb on - strand, within Dsui_2581at 2732.520 kb on + strand, within Dsui_2581at 2732.520 kb on + strand, within Dsui_2581at 2732.530 kb on + strand, within Dsui_2581at 2732.530 kb on + strand, within Dsui_2581at 2732.558 kb on - strand, within Dsui_2581at 2732.578 kb on + strand, within Dsui_2581at 2732.578 kb on + strand, within Dsui_2581at 2732.586 kb on - strand, within Dsui_2581at 2732.596 kb on - strand, within Dsui_2581at 2732.668 kb on + strand, within Dsui_2581at 2732.694 kb on + strand, within Dsui_2581at 2732.722 kb on + strand, within Dsui_2581at 2732.727 kb on + strand, within Dsui_2581at 2732.740 kb on - strand, within Dsui_2581at 2732.757 kb on - strand, within Dsui_2581at 2732.810 kb on + strand, within Dsui_2581at 2732.813 kb on - strand, within Dsui_2581at 2732.895 kb on - strand, within Dsui_2581at 2732.932 kb on + strand, within Dsui_2581at 2732.932 kb on + strand, within Dsui_2581at 2732.939 kb on + strand, within Dsui_2581at 2732.940 kb on - strand, within Dsui_2581at 2733.044 kb on + strand, within Dsui_2581at 2733.053 kb on - strand, within Dsui_2581at 2733.096 kb on + strand, within Dsui_2581at 2733.098 kb on - strand, within Dsui_2581at 2733.102 kb on + strand, within Dsui_2581at 2733.102 kb on + strand, within Dsui_2581at 2733.125 kb on + strand, within Dsui_2581at 2733.147 kb on + strand, within Dsui_2581at 2733.147 kb on + strand, within Dsui_2581at 2733.155 kb on - strand, within Dsui_2581at 2733.158 kb on + strand, within Dsui_2581at 2733.171 kb on - strand, within Dsui_2581at 2733.178 kb on + strand, within Dsui_2581at 2733.178 kb on + strand, within Dsui_2581at 2733.178 kb on + strand, within Dsui_2581at 2733.186 kb on - strand, within Dsui_2581at 2733.195 kb on - strand, within Dsui_2581at 2733.287 kb on - strand, within Dsui_2581at 2733.332 kb on - strand, within Dsui_2581at 2733.464 kb on - strand, within Dsui_2581at 2733.519 kb on + strand, within Dsui_2581at 2733.519 kb on + strand, within Dsui_2581at 2733.548 kb on - strand, within Dsui_2581at 2733.614 kb on - strand, within Dsui_2581at 2733.618 kb on + strand, within Dsui_2581at 2733.618 kb on + strand, within Dsui_2581at 2733.623 kb on + strand, within Dsui_2581at 2733.626 kb on - strand, within Dsui_2581at 2733.671 kb on - strand, within Dsui_2581at 2733.673 kb on + strand, within Dsui_2581at 2733.715 kb on - strand, within Dsui_2581at 2733.722 kb on + strand, within Dsui_2581at 2733.787 kb on + strand, within Dsui_2581at 2733.801 kb on + strand, within Dsui_2581at 2733.807 kb on - strand, within Dsui_2581at 2733.972 kb on + strand, within Dsui_2581at 2733.977 kb on + strand, within Dsui_2581at 2733.990 kb on - strand, within Dsui_2581at 2734.010 kb on + strand, within Dsui_2581at 2734.010 kb on + strand, within Dsui_2581at 2734.011 kb on - strand, within Dsui_2581at 2734.018 kb on - strand, within Dsui_2581at 2734.018 kb on - strand, within Dsui_2581at 2734.018 kb on - strand, within Dsui_2581at 2734.094 kb on + strand, within Dsui_2581at 2734.123 kb on - strandat 2734.379 kb on - strandat 2734.400 kb on - strandat 2734.428 kb on + strandat 2734.480 kb on + strandat 2734.608 kb on - strandat 2734.620 kb on - strandat 2734.620 kb on - strandat 2734.641 kb on + strandat 2734.642 kb on + strandat 2734.693 kb on - strandat 2734.804 kb on + strandat 2734.812 kb on - strandat 2734.812 kb on - strandat 2734.875 kb on - strandat 2734.877 kb on + strandat 2734.966 kb on + strandat 2735.048 kb on + strandat 2735.064 kb on + strandat 2735.114 kb on + strandat 2735.204 kb on + strandat 2735.216 kb on + strandat 2735.224 kb on - strandat 2735.225 kb on - strandat 2735.261 kb on - strandat 2735.263 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor
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2,731,331 + +0.4
2,731,349 + +0.4
2,731,350 + -0.1
2,731,360 - -0.3
2,731,362 + +0.3
2,731,388 - +0.8
2,731,397 + +0.4
2,731,397 + +0.2
2,731,405 + Dsui_2580 0.10 +0.0
2,731,413 - Dsui_2580 0.13 +0.6
2,731,430 + Dsui_2580 0.17 +0.4
2,731,430 + Dsui_2580 0.17 +0.2
2,731,442 + Dsui_2580 0.20 -0.0
2,731,445 - Dsui_2580 0.21 +0.2
2,731,450 - +0.3
2,731,450 - Dsui_2580 0.22 -0.3
2,731,450 - Dsui_2580 0.22 -0.3
2,731,474 + Dsui_2580 0.29 +0.3
2,731,549 - Dsui_2580 0.49 +0.1
2,731,554 - +1.6
2,731,559 + Dsui_2580 0.51 +0.2
2,731,559 + Dsui_2580 0.51 +0.2
2,731,559 + Dsui_2580 0.51 +0.3
2,731,599 + Dsui_2580 0.62 +0.2
2,731,616 + Dsui_2580 0.67 +0.2
2,731,624 - Dsui_2580 0.69 -0.6
2,731,624 - Dsui_2580 0.69 +0.7
2,731,633 + Dsui_2580 0.71 +0.1
2,731,638 + Dsui_2580 0.73 +0.3
2,731,638 + Dsui_2580 0.73 +0.8
2,731,638 + Dsui_2580 0.73 -0.3
2,731,646 - Dsui_2580 0.75 -0.6
2,731,646 - Dsui_2580 0.75 -0.5
2,731,648 + Dsui_2580 0.75 +0.2
2,731,648 + Dsui_2580 0.75 +0.3
2,731,649 - Dsui_2580 0.75 -1.4
2,731,656 - Dsui_2580 0.77 -0.4
2,731,658 + Dsui_2580 0.78 +0.5
2,731,667 - -0.2
2,731,713 - -0.1
2,731,720 + +0.2
2,731,727 - +0.8
2,731,747 + +0.2
2,731,804 + +0.2
2,731,804 + +0.4
2,731,804 + +0.3
2,731,804 + +0.2
2,731,804 + +0.1
2,731,804 + +0.3
2,731,807 - +0.3
2,731,812 - +0.2
2,731,812 - -0.6
2,731,812 - -2.0
2,731,845 + +0.5
2,731,845 - -0.5
2,731,846 + +0.2
2,731,875 + +0.2
2,731,875 + +0.5
2,731,896 + +0.5
2,731,896 + +0.3
2,731,901 + +0.4
2,731,901 + +0.3
2,731,948 + +0.3
2,731,962 + +0.4
2,731,963 + +0.3
2,731,970 + +0.1
2,731,970 - +0.7
2,731,979 - -0.1
2,731,981 + +0.5
2,731,981 + +0.3
2,731,981 + +0.2
2,731,981 + +0.2
2,731,981 + +0.2
2,731,981 + +0.4
2,731,981 + +0.2
2,731,981 + +0.2
2,731,984 - +0.3
2,731,989 - -0.1
2,731,989 - -0.4
2,731,989 - -0.2
2,731,991 + +0.3
2,731,999 - +1.1
2,732,044 - -0.2
2,732,052 - -0.1
2,732,054 + +0.1
2,732,056 + +0.5
2,732,056 + -0.7
2,732,108 + +0.3
2,732,110 + +0.2
2,732,112 - +0.0
2,732,117 + +0.1
2,732,117 + +0.5
2,732,122 + -1.1
2,732,122 + +0.3
2,732,122 + +0.7
2,732,122 + +0.3
2,732,122 + +0.4
2,732,122 + +0.2
2,732,122 + +0.3
2,732,130 - +0.2
2,732,130 - +0.3
2,732,130 - +0.2
2,732,130 - +0.3
2,732,130 - +0.1
2,732,141 + +0.3
2,732,184 + +0.2
2,732,199 + +0.1
2,732,208 + +0.1
2,732,218 + +0.1
2,732,261 + +0.3
2,732,299 + +0.5
2,732,304 + +0.2
2,732,306 + +0.1
2,732,312 - +0.5
2,732,320 - -0.4
2,732,320 - +0.5
2,732,321 - -0.4
2,732,339 + +0.3
2,732,340 - +1.3
2,732,352 + +0.1
2,732,370 + +0.3
2,732,378 + +0.1
2,732,383 + +0.2
2,732,391 - +0.1
2,732,398 + +0.1
2,732,398 + +0.1
2,732,398 + +0.3
2,732,406 - +0.2
2,732,406 - +0.1
2,732,421 - +0.2
2,732,464 - +0.2
2,732,518 - Dsui_2581 0.10 +0.3
2,732,520 + Dsui_2581 0.10 +0.3
2,732,520 + Dsui_2581 0.10 +0.4
2,732,530 + Dsui_2581 0.11 +0.2
2,732,530 + Dsui_2581 0.11 +0.7
2,732,558 - Dsui_2581 0.12 +0.4
2,732,578 + Dsui_2581 0.13 +0.1
2,732,578 + Dsui_2581 0.13 +0.4
2,732,586 - Dsui_2581 0.14 -0.0
2,732,596 - Dsui_2581 0.14 +0.2
2,732,668 + Dsui_2581 0.18 +0.3
2,732,694 + Dsui_2581 0.19 +0.4
2,732,722 + Dsui_2581 0.20 +0.2
2,732,727 + Dsui_2581 0.21 +0.2
2,732,740 - Dsui_2581 0.21 +0.2
2,732,757 - Dsui_2581 0.22 +0.1
2,732,810 + Dsui_2581 0.25 -0.0
2,732,813 - Dsui_2581 0.25 +0.8
2,732,895 - Dsui_2581 0.29 +0.2
2,732,932 + Dsui_2581 0.31 +0.1
2,732,932 + Dsui_2581 0.31 +0.7
2,732,939 + Dsui_2581 0.31 -0.1
2,732,940 - Dsui_2581 0.31 -0.1
2,733,044 + Dsui_2581 0.37 -0.1
2,733,053 - Dsui_2581 0.37 +0.5
2,733,096 + Dsui_2581 0.39 -0.0
2,733,098 - Dsui_2581 0.39 -0.4
2,733,102 + Dsui_2581 0.40 +0.3
2,733,102 + Dsui_2581 0.40 +0.4
2,733,125 + Dsui_2581 0.41 -0.0
2,733,147 + Dsui_2581 0.42 +0.5
2,733,147 + Dsui_2581 0.42 -0.2
2,733,155 - Dsui_2581 0.42 +0.2
2,733,158 + Dsui_2581 0.42 +0.6
2,733,171 - Dsui_2581 0.43 -0.2
2,733,178 + Dsui_2581 0.43 +0.7
2,733,178 + Dsui_2581 0.43 +0.0
2,733,178 + Dsui_2581 0.43 -0.2
2,733,186 - Dsui_2581 0.44 +0.2
2,733,195 - Dsui_2581 0.44 +0.1
2,733,287 - Dsui_2581 0.49 +0.3
2,733,332 - Dsui_2581 0.51 +0.3
2,733,464 - Dsui_2581 0.58 -0.0
2,733,519 + Dsui_2581 0.61 -0.7
2,733,519 + Dsui_2581 0.61 -0.1
2,733,548 - Dsui_2581 0.62 +0.3
2,733,614 - Dsui_2581 0.65 +0.4
2,733,618 + Dsui_2581 0.66 +0.4
2,733,618 + Dsui_2581 0.66 +1.2
2,733,623 + Dsui_2581 0.66 +0.2
2,733,626 - Dsui_2581 0.66 -0.4
2,733,671 - Dsui_2581 0.68 +0.7
2,733,673 + Dsui_2581 0.68 -1.0
2,733,715 - Dsui_2581 0.70 -1.5
2,733,722 + Dsui_2581 0.71 +0.6
2,733,787 + Dsui_2581 0.74 +0.4
2,733,801 + Dsui_2581 0.75 -1.3
2,733,807 - Dsui_2581 0.75 +0.9
2,733,972 + Dsui_2581 0.83 -0.1
2,733,977 + Dsui_2581 0.84 +0.4
2,733,990 - Dsui_2581 0.84 -0.0
2,734,010 + Dsui_2581 0.85 +1.6
2,734,010 + Dsui_2581 0.85 +0.8
2,734,011 - Dsui_2581 0.85 -0.5
2,734,018 - Dsui_2581 0.86 -0.6
2,734,018 - Dsui_2581 0.86 -0.0
2,734,018 - Dsui_2581 0.86 +0.4
2,734,094 + Dsui_2581 0.90 +0.4
2,734,123 - +0.1
2,734,379 - +0.4
2,734,400 - +0.1
2,734,428 + +0.7
2,734,480 + +1.5
2,734,608 - -0.1
2,734,620 - -0.1
2,734,620 - +0.3
2,734,641 + -0.1
2,734,642 + +0.5
2,734,693 - -0.2
2,734,804 + +0.3
2,734,812 - +0.3
2,734,812 - +0.5
2,734,875 - +0.1
2,734,877 + -0.1
2,734,966 + +0.2
2,735,048 + -0.0
2,735,064 + -0.5
2,735,114 + -1.6
2,735,204 + +0.1
2,735,216 + +0.1
2,735,224 - -0.2
2,735,225 - +0.2
2,735,261 - -2.0
2,735,263 + +0.2

Or see this region's nucleotide sequence