Experiment: Anaero. lactate (C), nitrate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2580 and Dsui_2581 are separated by 574 nucleotides
Dsui_2580: Dsui_2580 - hypothetical protein, at 2,731,366 to 2,731,740
_2580
Dsui_2581: Dsui_2581 - putative HD superfamily hydrolase, at 2,732,315 to 2,734,300
_2581
Position (kb)
2732
2733
2734
2735 Strain fitness (log2 ratio)
-2
-1
0
1 at 2731.331 kb on + strand at 2731.349 kb on + strand at 2731.350 kb on + strand at 2731.360 kb on - strand at 2731.362 kb on + strand at 2731.388 kb on - strand at 2731.397 kb on + strand at 2731.397 kb on + strand at 2731.405 kb on + strand, within Dsui_2580 at 2731.413 kb on - strand, within Dsui_2580 at 2731.430 kb on + strand, within Dsui_2580 at 2731.430 kb on + strand, within Dsui_2580 at 2731.442 kb on + strand, within Dsui_2580 at 2731.445 kb on - strand, within Dsui_2580 at 2731.450 kb on - strand at 2731.450 kb on - strand, within Dsui_2580 at 2731.450 kb on - strand, within Dsui_2580 at 2731.474 kb on + strand, within Dsui_2580 at 2731.549 kb on - strand, within Dsui_2580 at 2731.554 kb on - strand at 2731.559 kb on + strand, within Dsui_2580 at 2731.559 kb on + strand, within Dsui_2580 at 2731.559 kb on + strand, within Dsui_2580 at 2731.599 kb on + strand, within Dsui_2580 at 2731.616 kb on + strand, within Dsui_2580 at 2731.624 kb on - strand, within Dsui_2580 at 2731.624 kb on - strand, within Dsui_2580 at 2731.633 kb on + strand, within Dsui_2580 at 2731.638 kb on + strand, within Dsui_2580 at 2731.638 kb on + strand, within Dsui_2580 at 2731.638 kb on + strand, within Dsui_2580 at 2731.646 kb on - strand, within Dsui_2580 at 2731.646 kb on - strand, within Dsui_2580 at 2731.648 kb on + strand, within Dsui_2580 at 2731.648 kb on + strand, within Dsui_2580 at 2731.649 kb on - strand, within Dsui_2580 at 2731.656 kb on - strand, within Dsui_2580 at 2731.658 kb on + strand, within Dsui_2580 at 2731.667 kb on - strand at 2731.713 kb on - strand at 2731.720 kb on + strand at 2731.727 kb on - strand at 2731.747 kb on + strand at 2731.804 kb on + strand at 2731.804 kb on + strand at 2731.804 kb on + strand at 2731.804 kb on + strand at 2731.804 kb on + strand at 2731.804 kb on + strand at 2731.807 kb on - strand at 2731.812 kb on - strand at 2731.812 kb on - strand at 2731.812 kb on - strand at 2731.845 kb on + strand at 2731.845 kb on - strand at 2731.846 kb on + strand at 2731.875 kb on + strand at 2731.875 kb on + strand at 2731.896 kb on + strand at 2731.896 kb on + strand at 2731.901 kb on + strand at 2731.901 kb on + strand at 2731.948 kb on + strand at 2731.962 kb on + strand at 2731.963 kb on + strand at 2731.970 kb on + strand at 2731.970 kb on - strand at 2731.979 kb on - strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.981 kb on + strand at 2731.984 kb on - strand at 2731.989 kb on - strand at 2731.989 kb on - strand at 2731.989 kb on - strand at 2731.991 kb on + strand at 2731.999 kb on - strand at 2732.044 kb on - strand at 2732.052 kb on - strand at 2732.054 kb on + strand at 2732.056 kb on + strand at 2732.056 kb on + strand at 2732.108 kb on + strand at 2732.110 kb on + strand at 2732.112 kb on - strand at 2732.117 kb on + strand at 2732.117 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.122 kb on + strand at 2732.130 kb on - strand at 2732.130 kb on - strand at 2732.130 kb on - strand at 2732.130 kb on - strand at 2732.130 kb on - strand at 2732.141 kb on + strand at 2732.184 kb on + strand at 2732.199 kb on + strand at 2732.208 kb on + strand at 2732.218 kb on + strand at 2732.261 kb on + strand at 2732.299 kb on + strand at 2732.304 kb on + strand at 2732.306 kb on + strand at 2732.312 kb on - strand at 2732.320 kb on - strand at 2732.320 kb on - strand at 2732.321 kb on - strand at 2732.339 kb on + strand at 2732.340 kb on - strand at 2732.352 kb on + strand at 2732.370 kb on + strand at 2732.378 kb on + strand at 2732.383 kb on + strand at 2732.391 kb on - strand at 2732.398 kb on + strand at 2732.398 kb on + strand at 2732.398 kb on + strand at 2732.406 kb on - strand at 2732.406 kb on - strand at 2732.421 kb on - strand at 2732.464 kb on - strand at 2732.518 kb on - strand, within Dsui_2581 at 2732.520 kb on + strand, within Dsui_2581 at 2732.520 kb on + strand, within Dsui_2581 at 2732.530 kb on + strand, within Dsui_2581 at 2732.530 kb on + strand, within Dsui_2581 at 2732.558 kb on - strand, within Dsui_2581 at 2732.578 kb on + strand, within Dsui_2581 at 2732.578 kb on + strand, within Dsui_2581 at 2732.586 kb on - strand, within Dsui_2581 at 2732.596 kb on - strand, within Dsui_2581 at 2732.668 kb on + strand, within Dsui_2581 at 2732.694 kb on + strand, within Dsui_2581 at 2732.722 kb on + strand, within Dsui_2581 at 2732.727 kb on + strand, within Dsui_2581 at 2732.740 kb on - strand, within Dsui_2581 at 2732.757 kb on - strand, within Dsui_2581 at 2732.810 kb on + strand, within Dsui_2581 at 2732.813 kb on - strand, within Dsui_2581 at 2732.895 kb on - strand, within Dsui_2581 at 2732.932 kb on + strand, within Dsui_2581 at 2732.932 kb on + strand, within Dsui_2581 at 2732.939 kb on + strand, within Dsui_2581 at 2732.940 kb on - strand, within Dsui_2581 at 2733.044 kb on + strand, within Dsui_2581 at 2733.053 kb on - strand, within Dsui_2581 at 2733.096 kb on + strand, within Dsui_2581 at 2733.098 kb on - strand, within Dsui_2581 at 2733.102 kb on + strand, within Dsui_2581 at 2733.102 kb on + strand, within Dsui_2581 at 2733.125 kb on + strand, within Dsui_2581 at 2733.147 kb on + strand, within Dsui_2581 at 2733.147 kb on + strand, within Dsui_2581 at 2733.155 kb on - strand, within Dsui_2581 at 2733.158 kb on + strand, within Dsui_2581 at 2733.171 kb on - strand, within Dsui_2581 at 2733.178 kb on + strand, within Dsui_2581 at 2733.178 kb on + strand, within Dsui_2581 at 2733.178 kb on + strand, within Dsui_2581 at 2733.186 kb on - strand, within Dsui_2581 at 2733.195 kb on - strand, within Dsui_2581 at 2733.287 kb on - strand, within Dsui_2581 at 2733.332 kb on - strand, within Dsui_2581 at 2733.464 kb on - strand, within Dsui_2581 at 2733.519 kb on + strand, within Dsui_2581 at 2733.519 kb on + strand, within Dsui_2581 at 2733.548 kb on - strand, within Dsui_2581 at 2733.614 kb on - strand, within Dsui_2581 at 2733.618 kb on + strand, within Dsui_2581 at 2733.618 kb on + strand, within Dsui_2581 at 2733.623 kb on + strand, within Dsui_2581 at 2733.626 kb on - strand, within Dsui_2581 at 2733.671 kb on - strand, within Dsui_2581 at 2733.673 kb on + strand, within Dsui_2581 at 2733.715 kb on - strand, within Dsui_2581 at 2733.722 kb on + strand, within Dsui_2581 at 2733.787 kb on + strand, within Dsui_2581 at 2733.801 kb on + strand, within Dsui_2581 at 2733.807 kb on - strand, within Dsui_2581 at 2733.972 kb on + strand, within Dsui_2581 at 2733.977 kb on + strand, within Dsui_2581 at 2733.990 kb on - strand, within Dsui_2581 at 2734.010 kb on + strand, within Dsui_2581 at 2734.010 kb on + strand, within Dsui_2581 at 2734.011 kb on - strand, within Dsui_2581 at 2734.018 kb on - strand, within Dsui_2581 at 2734.018 kb on - strand, within Dsui_2581 at 2734.018 kb on - strand, within Dsui_2581 at 2734.094 kb on + strand, within Dsui_2581 at 2734.123 kb on - strand at 2734.379 kb on - strand at 2734.400 kb on - strand at 2734.428 kb on + strand at 2734.480 kb on + strand at 2734.608 kb on - strand at 2734.620 kb on - strand at 2734.620 kb on - strand at 2734.641 kb on + strand at 2734.642 kb on + strand at 2734.693 kb on - strand at 2734.804 kb on + strand at 2734.812 kb on - strand at 2734.812 kb on - strand at 2734.875 kb on - strand at 2734.877 kb on + strand at 2734.966 kb on + strand at 2735.048 kb on + strand at 2735.064 kb on + strand at 2735.114 kb on + strand at 2735.204 kb on + strand at 2735.216 kb on + strand at 2735.224 kb on - strand at 2735.225 kb on - strand at 2735.261 kb on - strand at 2735.263 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), nitrate electron acceptor remove 2,731,331 + +0.4 2,731,349 + +0.4 2,731,350 + -0.1 2,731,360 - -0.3 2,731,362 + +0.3 2,731,388 - +0.8 2,731,397 + +0.4 2,731,397 + +0.2 2,731,405 + Dsui_2580 0.10 +0.0 2,731,413 - Dsui_2580 0.13 +0.6 2,731,430 + Dsui_2580 0.17 +0.4 2,731,430 + Dsui_2580 0.17 +0.2 2,731,442 + Dsui_2580 0.20 -0.0 2,731,445 - Dsui_2580 0.21 +0.2 2,731,450 - +0.3 2,731,450 - Dsui_2580 0.22 -0.3 2,731,450 - Dsui_2580 0.22 -0.3 2,731,474 + Dsui_2580 0.29 +0.3 2,731,549 - Dsui_2580 0.49 +0.1 2,731,554 - +1.6 2,731,559 + Dsui_2580 0.51 +0.2 2,731,559 + Dsui_2580 0.51 +0.2 2,731,559 + Dsui_2580 0.51 +0.3 2,731,599 + Dsui_2580 0.62 +0.2 2,731,616 + Dsui_2580 0.67 +0.2 2,731,624 - Dsui_2580 0.69 -0.6 2,731,624 - Dsui_2580 0.69 +0.7 2,731,633 + Dsui_2580 0.71 +0.1 2,731,638 + Dsui_2580 0.73 +0.3 2,731,638 + Dsui_2580 0.73 +0.8 2,731,638 + Dsui_2580 0.73 -0.3 2,731,646 - Dsui_2580 0.75 -0.6 2,731,646 - Dsui_2580 0.75 -0.5 2,731,648 + Dsui_2580 0.75 +0.2 2,731,648 + Dsui_2580 0.75 +0.3 2,731,649 - Dsui_2580 0.75 -1.4 2,731,656 - Dsui_2580 0.77 -0.4 2,731,658 + Dsui_2580 0.78 +0.5 2,731,667 - -0.2 2,731,713 - -0.1 2,731,720 + +0.2 2,731,727 - +0.8 2,731,747 + +0.2 2,731,804 + +0.2 2,731,804 + +0.4 2,731,804 + +0.3 2,731,804 + +0.2 2,731,804 + +0.1 2,731,804 + +0.3 2,731,807 - +0.3 2,731,812 - +0.2 2,731,812 - -0.6 2,731,812 - -2.0 2,731,845 + +0.5 2,731,845 - -0.5 2,731,846 + +0.2 2,731,875 + +0.2 2,731,875 + +0.5 2,731,896 + +0.5 2,731,896 + +0.3 2,731,901 + +0.4 2,731,901 + +0.3 2,731,948 + +0.3 2,731,962 + +0.4 2,731,963 + +0.3 2,731,970 + +0.1 2,731,970 - +0.7 2,731,979 - -0.1 2,731,981 + +0.5 2,731,981 + +0.3 2,731,981 + +0.2 2,731,981 + +0.2 2,731,981 + +0.2 2,731,981 + +0.4 2,731,981 + +0.2 2,731,981 + +0.2 2,731,984 - +0.3 2,731,989 - -0.1 2,731,989 - -0.4 2,731,989 - -0.2 2,731,991 + +0.3 2,731,999 - +1.1 2,732,044 - -0.2 2,732,052 - -0.1 2,732,054 + +0.1 2,732,056 + +0.5 2,732,056 + -0.7 2,732,108 + +0.3 2,732,110 + +0.2 2,732,112 - +0.0 2,732,117 + +0.1 2,732,117 + +0.5 2,732,122 + -1.1 2,732,122 + +0.3 2,732,122 + +0.7 2,732,122 + +0.3 2,732,122 + +0.4 2,732,122 + +0.2 2,732,122 + +0.3 2,732,130 - +0.2 2,732,130 - +0.3 2,732,130 - +0.2 2,732,130 - +0.3 2,732,130 - +0.1 2,732,141 + +0.3 2,732,184 + +0.2 2,732,199 + +0.1 2,732,208 + +0.1 2,732,218 + +0.1 2,732,261 + +0.3 2,732,299 + +0.5 2,732,304 + +0.2 2,732,306 + +0.1 2,732,312 - +0.5 2,732,320 - -0.4 2,732,320 - +0.5 2,732,321 - -0.4 2,732,339 + +0.3 2,732,340 - +1.3 2,732,352 + +0.1 2,732,370 + +0.3 2,732,378 + +0.1 2,732,383 + +0.2 2,732,391 - +0.1 2,732,398 + +0.1 2,732,398 + +0.1 2,732,398 + +0.3 2,732,406 - +0.2 2,732,406 - +0.1 2,732,421 - +0.2 2,732,464 - +0.2 2,732,518 - Dsui_2581 0.10 +0.3 2,732,520 + Dsui_2581 0.10 +0.3 2,732,520 + Dsui_2581 0.10 +0.4 2,732,530 + Dsui_2581 0.11 +0.2 2,732,530 + Dsui_2581 0.11 +0.7 2,732,558 - Dsui_2581 0.12 +0.4 2,732,578 + Dsui_2581 0.13 +0.1 2,732,578 + Dsui_2581 0.13 +0.4 2,732,586 - Dsui_2581 0.14 -0.0 2,732,596 - Dsui_2581 0.14 +0.2 2,732,668 + Dsui_2581 0.18 +0.3 2,732,694 + Dsui_2581 0.19 +0.4 2,732,722 + Dsui_2581 0.20 +0.2 2,732,727 + Dsui_2581 0.21 +0.2 2,732,740 - Dsui_2581 0.21 +0.2 2,732,757 - Dsui_2581 0.22 +0.1 2,732,810 + Dsui_2581 0.25 -0.0 2,732,813 - Dsui_2581 0.25 +0.8 2,732,895 - Dsui_2581 0.29 +0.2 2,732,932 + Dsui_2581 0.31 +0.1 2,732,932 + Dsui_2581 0.31 +0.7 2,732,939 + Dsui_2581 0.31 -0.1 2,732,940 - Dsui_2581 0.31 -0.1 2,733,044 + Dsui_2581 0.37 -0.1 2,733,053 - Dsui_2581 0.37 +0.5 2,733,096 + Dsui_2581 0.39 -0.0 2,733,098 - Dsui_2581 0.39 -0.4 2,733,102 + Dsui_2581 0.40 +0.3 2,733,102 + Dsui_2581 0.40 +0.4 2,733,125 + Dsui_2581 0.41 -0.0 2,733,147 + Dsui_2581 0.42 +0.5 2,733,147 + Dsui_2581 0.42 -0.2 2,733,155 - Dsui_2581 0.42 +0.2 2,733,158 + Dsui_2581 0.42 +0.6 2,733,171 - Dsui_2581 0.43 -0.2 2,733,178 + Dsui_2581 0.43 +0.7 2,733,178 + Dsui_2581 0.43 +0.0 2,733,178 + Dsui_2581 0.43 -0.2 2,733,186 - Dsui_2581 0.44 +0.2 2,733,195 - Dsui_2581 0.44 +0.1 2,733,287 - Dsui_2581 0.49 +0.3 2,733,332 - Dsui_2581 0.51 +0.3 2,733,464 - Dsui_2581 0.58 -0.0 2,733,519 + Dsui_2581 0.61 -0.7 2,733,519 + Dsui_2581 0.61 -0.1 2,733,548 - Dsui_2581 0.62 +0.3 2,733,614 - Dsui_2581 0.65 +0.4 2,733,618 + Dsui_2581 0.66 +0.4 2,733,618 + Dsui_2581 0.66 +1.2 2,733,623 + Dsui_2581 0.66 +0.2 2,733,626 - Dsui_2581 0.66 -0.4 2,733,671 - Dsui_2581 0.68 +0.7 2,733,673 + Dsui_2581 0.68 -1.0 2,733,715 - Dsui_2581 0.70 -1.5 2,733,722 + Dsui_2581 0.71 +0.6 2,733,787 + Dsui_2581 0.74 +0.4 2,733,801 + Dsui_2581 0.75 -1.3 2,733,807 - Dsui_2581 0.75 +0.9 2,733,972 + Dsui_2581 0.83 -0.1 2,733,977 + Dsui_2581 0.84 +0.4 2,733,990 - Dsui_2581 0.84 -0.0 2,734,010 + Dsui_2581 0.85 +1.6 2,734,010 + Dsui_2581 0.85 +0.8 2,734,011 - Dsui_2581 0.85 -0.5 2,734,018 - Dsui_2581 0.86 -0.6 2,734,018 - Dsui_2581 0.86 -0.0 2,734,018 - Dsui_2581 0.86 +0.4 2,734,094 + Dsui_2581 0.90 +0.4 2,734,123 - +0.1 2,734,379 - +0.4 2,734,400 - +0.1 2,734,428 + +0.7 2,734,480 + +1.5 2,734,608 - -0.1 2,734,620 - -0.1 2,734,620 - +0.3 2,734,641 + -0.1 2,734,642 + +0.5 2,734,693 - -0.2 2,734,804 + +0.3 2,734,812 - +0.3 2,734,812 - +0.5 2,734,875 - +0.1 2,734,877 + -0.1 2,734,966 + +0.2 2,735,048 + -0.0 2,735,064 + -0.5 2,735,114 + -1.6 2,735,204 + +0.1 2,735,216 + +0.1 2,735,224 - -0.2 2,735,225 - +0.2 2,735,261 - -2.0 2,735,263 + +0.2
Or see this region's nucleotide sequence