Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16290
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 3,380,562 | + | BWI76_RS16285 | 0.50 | -0.5 | |
| 3,380,622 | - | BWI76_RS16285 | 0.54 | +0.9 | |
| 3,380,837 | - | BWI76_RS16285 | 0.69 | -1.0 | |
| 3,380,850 | + | BWI76_RS16285 | 0.69 | +0.6 | |
| 3,381,054 | - | BWI76_RS16285 | 0.83 | -1.1 | |
| 3,381,077 | - | BWI76_RS16285 | 0.85 | -0.2 | |
| 3,381,426 | - | -1.3 | |||
| 3,381,444 | - | BWI76_RS16290 | 0.11 | +0.2 | |
| 3,381,494 | - | BWI76_RS16290 | 0.15 | +0.7 | |
| 3,381,580 | + | BWI76_RS16290 | 0.24 | +1.3 | |
| 3,382,293 | - | +2.7 | |||
| 3,382,358 | + | -0.3 | |||
| 3,382,599 | + | -0.1 | |||
| 3,382,606 | - | +0.3 | |||
| 3,382,624 | - | -0.4 | |||
| 3,382,666 | - | +0.1 | |||
| 3,382,721 | + | BWI76_RS16295 | 0.11 | -0.3 | |
| 3,382,932 | - | BWI76_RS16295 | 0.25 | +0.7 | |
| 3,383,087 | - | BWI76_RS16295 | 0.34 | -0.0 | |
| 3,383,188 | - | BWI76_RS16295 | 0.41 | +0.1 | |
| 3,383,362 | - | BWI76_RS16295 | 0.52 | +0.2 |
Or see this region's nucleotide sequence