Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09090
Experiment: Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 1,918,347 | - | BWI76_RS09085 | 0.40 | -1.5 | |
| 1,918,418 | + | BWI76_RS09085 | 0.46 | -0.3 | |
| 1,918,435 | + | BWI76_RS09085 | 0.47 | -0.3 | |
| 1,918,585 | - | BWI76_RS09085 | 0.59 | +0.2 | |
| 1,918,846 | + | BWI76_RS09085 | 0.81 | +0.2 | |
| 1,919,054 | - | +0.2 | |||
| 1,919,139 | - | +0.8 | |||
| 1,919,319 | + | -0.0 | |||
| 1,919,343 | + | -0.1 | |||
| 1,919,348 | - | -0.5 | |||
| 1,919,353 | - | +0.3 | |||
| 1,919,403 | - | BWI76_RS09090 | 0.15 | +0.3 | |
| 1,919,416 | - | BWI76_RS09090 | 0.16 | +2.0 | |
| 1,919,476 | - | BWI76_RS09090 | 0.23 | +0.5 | |
| 1,919,975 | - | BWI76_RS09090 | 0.76 | +0.8 | |
| 1,920,075 | + | BWI76_RS09090 | 0.86 | -0.2 | |
| 1,920,158 | + | +0.2 | |||
| 1,920,266 | + | -0.3 | |||
| 1,920,323 | + | +0.2 | |||
| 1,920,821 | - | BWI76_RS09095 | 0.33 | -0.2 | |
| 1,921,004 | + | BWI76_RS09095 | 0.42 | -0.8 | |
| 1,921,037 | + | BWI76_RS09095 | 0.44 | +0.1 | |
| 1,921,045 | - | BWI76_RS09095 | 0.45 | +0.2 | |
| 1,921,088 | + | BWI76_RS09095 | 0.47 | -1.4 | |
| 1,921,154 | + | BWI76_RS09095 | 0.51 | +0.1 |
Or see this region's nucleotide sequence