Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31910

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
2,718,372	+				-0.2
2,718,451	-		BPHYT_RS31905	0.20	-0.8
2,718,839	-				-0.2
2,718,894	+				+0.0
2,719,103	-				+1.4
2,719,351	+				-0.0
2,719,547	-		BPHYT_RS31910	0.27	-1.0
2,719,620	-		BPHYT_RS31910	0.37	-1.6
2,720,114	+				-1.8
2,720,133	+				-2.8
2,720,134	-				-0.2
2,720,134	-				-0.6
2,720,134	-				+0.5
2,720,181	-				+0.8
2,720,352	-		BPHYT_RS31915	0.21	-0.2
2,720,530	+		BPHYT_RS31915	0.43	+1.4
2,720,531	-		BPHYT_RS31915	0.43	-1.0
2,720,571	-		BPHYT_RS31915	0.48	-0.9
2,720,798	-		BPHYT_RS31915	0.75	+0.4
2,720,798	-		BPHYT_RS31915	0.75	+0.8
2,721,044	+				-1.1