Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17680

Experiment: P. phyto PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. phyto PHYTO2 MOI 1
3,994,473	+		BPHYT_RS17665	0.75	+0.8
3,994,492	+		BPHYT_RS17665	0.80	-0.6
3,994,549	-				+0.3
3,994,660	+				+0.2
3,994,948	+		BPHYT_RS17670	0.71	-2.9
3,994,949	-		BPHYT_RS17670	0.72	+0.4
3,994,949	-		BPHYT_RS17670	0.72	+0.7
3,994,949	-		BPHYT_RS17670	0.72	-0.6
3,995,009	+		BPHYT_RS17670	0.87	-1.6
3,995,009	+		BPHYT_RS17670	0.87	-2.2
3,995,064	+				+0.0
3,995,064	+				-0.2
3,995,064	+				+0.5
3,995,064	+				+0.9
3,995,064	+				+1.3
3,995,065	-				+0.8
3,995,065	-				-0.2
3,995,065	-				+0.1
3,995,065	-				-0.0
3,995,305	-		BPHYT_RS17675	0.61	+0.9
3,995,536	+				-1.3
3,995,666	+		BPHYT_RS17680	0.25	+0.3
3,995,881	+		BPHYT_RS17680	0.53	-1.0
3,995,882	-		BPHYT_RS17680	0.53	-0.7
3,995,882	-		BPHYT_RS17680	0.53	+0.6
3,996,230	+				+1.1
3,996,230	+				-0.5
3,996,235	-				-0.2
3,996,235	-				-1.2
3,996,482	-				+1.3
3,996,482	-				+0.4
3,996,733	+		BPHYT_RS17685	0.34	+1.5
3,996,754	+		BPHYT_RS17685	0.36	-0.6
3,996,755	-		BPHYT_RS17685	0.37	+1.0
3,996,857	+		BPHYT_RS17685	0.50	-2.8
3,996,857	+		BPHYT_RS17685	0.50	+1.3
3,996,932	-		BPHYT_RS17685	0.60	-0.7
3,996,932	-		BPHYT_RS17685	0.60	-0.1
3,996,932	-		BPHYT_RS17685	0.60	+0.2
3,996,952	+		BPHYT_RS17685	0.63	-1.2
3,996,953	-		BPHYT_RS17685	0.63	-1.5
3,997,188	+				-0.2
3,997,188	+				-0.3
3,997,188	+				+3.1
3,997,189	-				-0.4
3,997,232	+				-2.1
3,997,232	+				-0.8
3,997,233	-				-0.0
3,997,233	-				-0.4
3,997,233	-				+0.4
3,997,233	-				+0.4
3,997,233	-				-0.9