Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05130

Experiment: 4-Aminobutyric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C)
1,142,725	+		PFLU_RS05120	0.34	+0.2
1,142,726	-		PFLU_RS05120	0.34	+0.2
1,142,726	-		PFLU_RS05120	0.34	-1.6
1,142,726	-		PFLU_RS05120	0.34	+2.0
1,142,726	-		PFLU_RS05120	0.34	+0.1
1,142,759	+		PFLU_RS05120	0.41	+0.5
1,142,759	+		PFLU_RS05120	0.41	-1.5
1,142,759	+		PFLU_RS05120	0.41	+2.7
1,142,759	+		PFLU_RS05120	0.41	+1.7
1,142,760	-		PFLU_RS05120	0.41	-1.4
1,142,760	-		PFLU_RS05120	0.41	-0.1
1,142,760	-		PFLU_RS05120	0.41	+0.2
1,142,760	-		PFLU_RS05120	0.41	-0.4
1,142,760	-		PFLU_RS05120	0.41	+0.3
1,142,789	+		PFLU_RS05120	0.47	+0.5
1,142,789	+		PFLU_RS05120	0.47	-0.1
1,142,789	+		PFLU_RS05120	0.47	-1.5
1,142,790	-		PFLU_RS05120	0.47	+0.6
1,142,828	+		PFLU_RS05120	0.55	-2.0
1,142,828	+		PFLU_RS05120	0.55	+0.7
1,142,828	+		PFLU_RS05120	0.55	+1.3
1,142,828	+		PFLU_RS05120	0.55	-0.5
1,142,828	+		PFLU_RS05120	0.55	+1.5
1,142,828	+		PFLU_RS05120	0.55	+0.7
1,142,828	+		PFLU_RS05120	0.55	+1.5
1,142,828	+		PFLU_RS05120	0.55	+0.1
1,142,828	+		PFLU_RS05120	0.55	-1.2
1,142,829	-		PFLU_RS05120	0.55	-1.0
1,142,829	-		PFLU_RS05120	0.55	+1.2
1,142,829	-		PFLU_RS05120	0.55	-1.4
1,142,829	-		PFLU_RS05120	0.55	-0.4
1,142,829	-		PFLU_RS05120	0.55	-1.4
1,142,829	-		PFLU_RS05120	0.55	+0.8
1,142,829	-		PFLU_RS05120	0.55	-2.5
1,142,829	-		PFLU_RS05120	0.55	+1.4
1,142,829	-		PFLU_RS05120	0.55	+0.6
1,142,829	-		PFLU_RS05120	0.55	+1.5
1,142,829	-		PFLU_RS05120	0.55	-0.1
1,142,829	-		PFLU_RS05120	0.55	+0.3
1,142,829	-		PFLU_RS05120	0.55	+2.2
1,142,829	-		PFLU_RS05120	0.55	+1.8
1,142,906	+		PFLU_RS05120	0.71	+0.5
1,142,906	+		PFLU_RS05120	0.71	-0.0
1,142,906	+		PFLU_RS05120	0.71	+0.4
1,142,906	+		PFLU_RS05120	0.71	-1.7
1,142,906	+		PFLU_RS05120	0.71	-2.9
1,142,906	+		PFLU_RS05120	0.71	+0.8
1,142,906	+		PFLU_RS05120	0.71	+0.7
1,142,906	+		PFLU_RS05120	0.71	+2.2
1,142,906	+		PFLU_RS05120	0.71	-1.6
1,142,906	+		PFLU_RS05120	0.71	-1.7
1,142,906	+		PFLU_RS05120	0.71	-0.1
1,142,906	+		PFLU_RS05120	0.71	+3.0
1,142,907	-		PFLU_RS05120	0.71	+1.2
1,142,907	-		PFLU_RS05120	0.71	+1.2
1,142,907	-		PFLU_RS05120	0.71	+1.6
1,142,907	-		PFLU_RS05120	0.71	-2.0
1,142,907	-		PFLU_RS05120	0.71	-1.0
1,142,907	-		PFLU_RS05120	0.71	-0.1
1,142,907	-		PFLU_RS05120	0.71	+0.1
1,142,907	-		PFLU_RS05120	0.71	-0.8
1,142,907	-		PFLU_RS05120	0.71	-1.9
1,142,957	+		PFLU_RS05120	0.82	-0.6
1,142,957	+		PFLU_RS05120	0.82	+2.7
1,142,957	+		PFLU_RS05120	0.82	-1.8
1,142,958	-		PFLU_RS05120	0.82	-3.1
1,142,958	-		PFLU_RS05120	0.82	+1.1
1,142,958	-		PFLU_RS05120	0.82	+0.2
1,142,958	-		PFLU_RS05120	0.82	-0.8
1,142,988	+		PFLU_RS05120	0.88	+1.8
1,142,988	+		PFLU_RS05120	0.88	-1.0
1,142,988	+		PFLU_RS05120	0.88	-2.1
1,142,989	-		PFLU_RS05120	0.88	+1.7
1,142,989	-		PFLU_RS05120	0.88	-0.4
1,142,989	-		PFLU_RS05120	0.88	+3.0
1,142,989	-		PFLU_RS05120	0.88	-0.6
1,142,989	-		PFLU_RS05120	0.88	+1.2
1,142,989	-		PFLU_RS05120	0.88	-0.1
1,142,989	-		PFLU_RS05120	0.88	-1.9
1,142,989	-		PFLU_RS05120	0.88	-1.7
1,142,989	-		PFLU_RS05120	0.88	-2.0
1,142,989	-		PFLU_RS05120	0.88	-0.1
1,142,989	-		PFLU_RS05120	0.88	-0.4
1,143,088	+		PFLU_RS05125	0.14	+0.0
1,143,088	+		PFLU_RS05125	0.14	-0.6
1,143,088	+		PFLU_RS05125	0.14	-0.3
1,143,088	+		PFLU_RS05125	0.14	+2.2
1,143,088	+		PFLU_RS05125	0.14	-1.0
1,143,089	-		PFLU_RS05125	0.15	-0.3
1,143,089	-		PFLU_RS05125	0.15	+0.7
1,143,091	+		PFLU_RS05125	0.15	-0.8
1,143,091	+		PFLU_RS05125	0.15	+1.7
1,143,091	+		PFLU_RS05125	0.15	-1.8
1,143,091	+		PFLU_RS05125	0.15	+0.6
1,143,091	+		PFLU_RS05125	0.15	+0.8
1,143,092	-		PFLU_RS05125	0.16	+0.2
1,143,092	-		PFLU_RS05125	0.16	-2.5
1,143,092	-		PFLU_RS05125	0.16	-0.4
1,143,092	-		PFLU_RS05125	0.16	-1.3
1,143,092	-		PFLU_RS05125	0.16	-0.1
1,143,092	-		PFLU_RS05125	0.16	-1.3
1,143,092	-		PFLU_RS05125	0.16	-0.8
1,143,092	-		PFLU_RS05125	0.16	-1.8
1,143,092	-		PFLU_RS05125	0.16	-0.1
1,143,171	+		PFLU_RS05125	0.41	-0.5
1,143,171	+		PFLU_RS05125	0.41	-2.1
1,143,311	+		PFLU_RS05125	0.85	+0.1
1,143,311	+		PFLU_RS05125	0.85	+1.2
1,143,311	+		PFLU_RS05125	0.85	-0.3
1,143,312	-		PFLU_RS05125	0.85	+1.6
1,143,312	-		PFLU_RS05125	0.85	+0.3
1,143,375	+				+1.4
1,143,375	+				-0.9
1,143,376	-				-0.6
1,143,411	+				-0.1
1,143,411	+				-0.1
1,143,412	-				+1.4
1,143,412	-				-1.3
1,143,412	-				+0.2
1,143,481	+				+2.8
1,143,482	-				+1.1
1,143,482	-				-1.6
1,143,482	-				+2.2
1,143,501	-				-1.8
1,143,738	+				+0.2
1,143,738	+				+1.9
1,143,739	-				+0.3
1,143,739	-				-0.6
1,143,746	+				-0.4
1,143,746	+				+1.9
1,143,746	+				+0.5
1,143,747	-				+1.3
1,143,771	+				-0.4
1,143,771	+				+2.8
1,143,771	+				-1.4
1,143,771	+				+0.7
1,143,771	+				+1.6
1,143,771	+				+0.8
1,143,772	-				+0.9
1,143,772	-				+2.5
1,143,772	-				+1.1
1,143,772	-				+0.2
1,143,772	-				+1.6
1,143,772	-				+0.5
1,143,772	-				-0.0
1,143,772	-				+0.2
1,143,772	-				-1.2
1,143,772	-				-1.4
1,143,772	-				+0.4
1,143,772	-				+2.7
1,143,772	-				+3.8
1,143,772	-				+1.1
1,143,838	+		PFLU_RS05130	0.14	+0.3
1,143,838	+		PFLU_RS05130	0.14	-1.3
1,143,838	+		PFLU_RS05130	0.14	-0.4
1,143,839	-		PFLU_RS05130	0.14	+0.9
1,143,839	-		PFLU_RS05130	0.14	+1.6
1,143,880	+		PFLU_RS05130	0.17	+1.2
1,143,881	-		PFLU_RS05130	0.17	+2.2
1,143,881	-		PFLU_RS05130	0.17	+2.2
1,143,881	-		PFLU_RS05130	0.17	-1.1
1,143,984	+		PFLU_RS05130	0.25	+1.9
1,143,985	-		PFLU_RS05130	0.26	-0.1
1,143,985	-		PFLU_RS05130	0.26	-2.4
1,143,985	-		PFLU_RS05130	0.26	-0.3
1,143,985	-		PFLU_RS05130	0.26	+0.6
1,143,985	-		PFLU_RS05130	0.26	-2.2
1,143,985	-		PFLU_RS05130	0.26	+1.9
1,143,985	-		PFLU_RS05130	0.26	-2.3
1,143,985	-		PFLU_RS05130	0.26	+2.2
1,143,985	-		PFLU_RS05130	0.26	-1.7
1,143,985	-		PFLU_RS05130	0.26	+1.8
1,143,985	-		PFLU_RS05130	0.26	+6.5
1,143,985	-		PFLU_RS05130	0.26	+0.3
1,143,985	-		PFLU_RS05130	0.26	+0.8
1,144,038	+		PFLU_RS05130	0.30	-0.3
1,144,074	+		PFLU_RS05130	0.32	+2.7
1,144,075	-		PFLU_RS05130	0.33	+1.6
1,144,136	+		PFLU_RS05130	0.37	+0.0
1,144,136	+		PFLU_RS05130	0.37	-0.4
1,144,137	-		PFLU_RS05130	0.37	-0.3
1,144,137	-		PFLU_RS05130	0.37	+1.3
1,144,137	-		PFLU_RS05130	0.37	-2.6
1,144,230	+		PFLU_RS05130	0.45	-2.0
1,144,429	-		PFLU_RS05130	0.60	-1.0
1,144,590	+		PFLU_RS05130	0.73	+2.5
1,144,590	+		PFLU_RS05130	0.73	+1.2
1,144,590	+		PFLU_RS05130	0.73	+1.6
1,144,591	-		PFLU_RS05130	0.73	+0.6
1,144,591	-		PFLU_RS05130	0.73	-1.1
1,144,591	-		PFLU_RS05130	0.73	+3.2
1,144,591	-		PFLU_RS05130	0.73	+0.9
1,144,591	-		PFLU_RS05130	0.73	+2.9
1,144,591	-		PFLU_RS05130	0.73	-0.8
1,144,591	-		PFLU_RS05130	0.73	-2.3
1,144,623	+		PFLU_RS05130	0.75	+1.2
1,144,623	+		PFLU_RS05130	0.75	+3.2
1,144,623	+		PFLU_RS05130	0.75	+0.6
1,144,623	+		PFLU_RS05130	0.75	+1.5
1,144,623	+		PFLU_RS05130	0.75	-0.4
1,144,623	+		PFLU_RS05130	0.75	+0.9
1,144,623	+		PFLU_RS05130	0.75	-1.1
1,144,623	+		PFLU_RS05130	0.75	-1.8
1,144,624	-		PFLU_RS05130	0.75	+2.5
1,144,624	-		PFLU_RS05130	0.75	-1.6
1,144,624	-		PFLU_RS05130	0.75	-1.1
1,144,624	-		PFLU_RS05130	0.75	-0.3
1,144,927	+				-1.9
1,144,927	+				+2.2
1,144,927	+				+1.1
1,144,927	+				+1.0
1,144,927	+				-1.9
1,144,927	+				+1.0
1,144,927	+				-2.1
1,144,927	+				-1.1
1,144,927	+				+1.3
1,144,927	+				-1.1
1,144,927	+				+1.9
1,144,927	+				+1.9
1,144,927	+				-0.7
1,144,927	+				-1.6
1,144,927	+				-0.2
1,144,927	+				-0.3
1,144,927	+				-1.8
1,144,927	+				-2.1
1,144,927	+				-0.4
1,144,927	+				+2.9
1,144,927	+				+1.8
1,144,927	+				+1.6
1,144,927	+				-0.0
1,144,928	-				-2.2
1,144,928	-				+1.9
1,144,928	-				+3.4
1,144,928	-				-0.5
1,144,928	-				-1.1
1,144,928	-				-0.3
1,144,928	-				+0.9
1,144,928	-				+0.6
1,144,928	-				+1.0
1,144,928	-				-0.6
1,144,928	-				+1.2
1,144,928	-				+0.8
1,144,928	-				-2.2
1,144,928	-				-1.4
1,144,928	-				-0.5
1,144,931	+				+2.5
1,144,931	+				+2.2
1,144,931	+				-0.6
1,144,931	+				+1.9
1,144,931	+				-0.1
1,144,931	+				-0.7
1,144,931	+				+0.1
1,144,931	+				+0.2
1,144,931	+				+2.0
1,144,931	+				-2.7
1,144,931	+				-1.0
1,144,931	+				-0.6
1,144,931	+				-0.2
1,144,931	+				-1.5
1,144,931	+				-0.8
1,144,931	+				+0.2
1,144,931	+				+1.0
1,144,931	+				-1.4
1,144,931	+				-1.2
1,144,931	+				+0.2
1,144,931	+				-0.1
1,144,931	+				-1.0
1,144,931	+				+1.2
1,144,931	+				+0.6
1,144,932	-				+0.8
1,144,932	-				+2.7
1,144,932	-				+1.3
1,144,932	-				+0.3
1,144,932	-				+2.6
1,144,932	-				+1.3
1,144,932	-				+2.2
1,144,932	-				+0.3
1,144,932	-				-0.8
1,144,932	-				-2.2
1,144,932	-				-0.9
1,144,932	-				-1.5
1,144,932	-				-0.8
1,144,932	-				+0.6
1,144,932	-				-0.6
1,144,932	-				+0.4
1,144,932	-				-1.1
1,144,932	-				+2.0
1,144,932	-				-1.3
1,144,957	+				-3.0
1,144,960	+				-2.1
1,144,961	-				-0.6
1,144,961	-				-1.3
1,144,992	-				-1.5
1,145,054	+				+1.5
1,145,054	+				+2.4
1,145,054	+				+2.2
1,145,055	-				+2.2
1,145,055	-				-0.4
1,145,055	-				-0.1
1,145,055	-				+3.8
1,145,055	-				+2.2
1,145,200	+		PFLU_RS05135	0.14	-0.4
1,145,200	+		PFLU_RS05135	0.14	+0.4
1,145,201	-		PFLU_RS05135	0.14	+2.5
1,145,201	-		PFLU_RS05135	0.14	-0.1
1,145,201	-		PFLU_RS05135	0.14	+2.3
1,145,434	+		PFLU_RS05135	0.31	+0.4
1,145,434	+		PFLU_RS05135	0.31	+3.1
1,145,434	+		PFLU_RS05135	0.31	-0.1
1,145,434	+		PFLU_RS05135	0.31	-0.8
1,145,434	+		PFLU_RS05135	0.31	-0.8
1,145,435	-		PFLU_RS05135	0.31	-1.1
1,145,435	-		PFLU_RS05135	0.31	+0.3
1,145,435	-		PFLU_RS05135	0.31	-1.4
1,145,435	-		PFLU_RS05135	0.31	-2.3
1,145,471	+		PFLU_RS05135	0.34	-0.4
1,145,471	+		PFLU_RS05135	0.34	-0.6
1,145,471	+		PFLU_RS05135	0.34	+2.7
1,145,471	+		PFLU_RS05135	0.34	+2.0
1,145,471	+		PFLU_RS05135	0.34	-2.3
1,145,471	+		PFLU_RS05135	0.34	-2.5
1,145,471	+		PFLU_RS05135	0.34	+2.0
1,145,471	+		PFLU_RS05135	0.34	+0.1
1,145,471	+		PFLU_RS05135	0.34	+2.1
1,145,471	+		PFLU_RS05135	0.34	-1.4
1,145,471	+		PFLU_RS05135	0.34	+2.4
1,145,471	+		PFLU_RS05135	0.34	+3.4
1,145,471	+		PFLU_RS05135	0.34	+1.1
1,145,471	+		PFLU_RS05135	0.34	-0.1
1,145,471	+		PFLU_RS05135	0.34	+2.2
1,145,471	+		PFLU_RS05135	0.34	+0.6
1,145,471	+		PFLU_RS05135	0.34	-0.5
1,145,471	+		PFLU_RS05135	0.34	-0.0
1,145,471	+		PFLU_RS05135	0.34	-0.7
1,145,471	+		PFLU_RS05135	0.34	+0.2
1,145,471	+		PFLU_RS05135	0.34	+2.4
1,145,471	+		PFLU_RS05135	0.34	-1.7
1,145,471	+		PFLU_RS05135	0.34	-0.4
1,145,471	+		PFLU_RS05135	0.34	+1.7
1,145,471	+		PFLU_RS05135	0.34	-1.7
1,145,471	+		PFLU_RS05135	0.34	+1.6
1,145,472	-		PFLU_RS05135	0.34	+0.3
1,145,472	-		PFLU_RS05135	0.34	-1.6
1,145,472	-		PFLU_RS05135	0.34	+0.3
1,145,472	-		PFLU_RS05135	0.34	+1.4
1,145,472	-		PFLU_RS05135	0.34	+1.2
1,145,472	-		PFLU_RS05135	0.34	-1.5
1,145,472	-		PFLU_RS05135	0.34	+1.6
1,145,472	-		PFLU_RS05135	0.34	+2.5
1,145,472	-		PFLU_RS05135	0.34	+1.4
1,145,472	-		PFLU_RS05135	0.34	+1.7
1,145,472	-		PFLU_RS05135	0.34	+1.0
1,145,472	-		PFLU_RS05135	0.34	+1.3
1,145,472	-		PFLU_RS05135	0.34	-2.8
1,145,472	-		PFLU_RS05135	0.34	-1.4
1,145,472	-		PFLU_RS05135	0.34	-1.1
1,145,474	+		PFLU_RS05135	0.34	-2.3
1,145,474	+		PFLU_RS05135	0.34	+1.7
1,145,474	+		PFLU_RS05135	0.34	+0.6
1,145,474	+		PFLU_RS05135	0.34	+0.6
1,145,474	+		PFLU_RS05135	0.34	+2.3
1,145,474	+		PFLU_RS05135	0.34	+0.7
1,145,474	+		PFLU_RS05135	0.34	+0.2
1,145,474	+		PFLU_RS05135	0.34	-2.1
1,145,474	+		PFLU_RS05135	0.34	+1.6
1,145,474	+		PFLU_RS05135	0.34	+0.6
1,145,474	+		PFLU_RS05135	0.34	+1.7
1,145,475	-		PFLU_RS05135	0.34	-0.6
1,145,475	-		PFLU_RS05135	0.34	+1.8
1,145,475	-		PFLU_RS05135	0.34	+0.4
1,145,475	-		PFLU_RS05135	0.34	-0.3
1,145,475	-		PFLU_RS05135	0.34	+2.1
1,145,475	-		PFLU_RS05135	0.34	+2.9
1,145,475	-		PFLU_RS05135	0.34	+2.3
1,145,475	-		PFLU_RS05135	0.34	+2.0
1,145,475	-		PFLU_RS05135	0.34	+0.6
1,145,475	-		PFLU_RS05135	0.34	+2.4
1,145,475	-		PFLU_RS05135	0.34	+0.4
1,145,475	-		PFLU_RS05135	0.34	+3.2
1,145,475	-		PFLU_RS05135	0.34	+1.0
1,145,742	+		PFLU_RS05135	0.54	-3.2
1,145,742	+		PFLU_RS05135	0.54	-2.1
1,145,742	+		PFLU_RS05135	0.54	-0.4
1,145,742	+		PFLU_RS05135	0.54	-2.5
1,145,742	+		PFLU_RS05135	0.54	-0.3
1,145,743	-		PFLU_RS05135	0.54	+1.3
1,145,743	-		PFLU_RS05135	0.54	-0.8
1,145,743	-		PFLU_RS05135	0.54	+2.7
1,145,743	-		PFLU_RS05135	0.54	+1.6
1,145,743	-		PFLU_RS05135	0.54	+1.0
1,145,743	-		PFLU_RS05135	0.54	+0.2
1,145,743	-		PFLU_RS05135	0.54	+2.2
1,145,743	-		PFLU_RS05135	0.54	+2.2
1,145,743	-		PFLU_RS05135	0.54	-2.1
1,145,743	-		PFLU_RS05135	0.54	+2.0
1,145,743	-		PFLU_RS05135	0.54	+1.7
1,145,871	-		PFLU_RS05135	0.63	+1.7