Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3210

Experiment: Ying_OrganicAcid7 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep C; time point 3
3,706,979	-				-0.7
3,706,979	-				-0.5
3,707,002	-				+0.3
3,707,002	-				-0.7
3,707,007	+				-0.7
3,707,007	+				-1.5
3,707,008	-				+0.3
3,707,010	-				-1.7
3,707,227	-				+0.3
3,707,262	-				-0.2
3,707,278	+				+0.3
3,707,282	-				-1.2
3,707,282	-				-0.1
3,707,357	+				-0.4
3,707,358	-				-0.7
3,707,358	-				+0.3
3,707,358	-				-0.7
3,707,358	-				+0.3
3,707,363	+				-0.7
3,707,363	+				-0.7
3,707,363	+				+0.3
3,707,363	+				+0.3
3,707,364	-				+0.3
3,707,381	+				-0.7
3,707,382	-				-0.5
3,707,393	+				+0.3
3,707,399	+				-1.7
3,707,399	+				-0.7
3,707,399	+				+0.3
3,707,399	+				+0.3
3,707,400	-				-0.7
3,707,400	-				-1.7
3,707,420	-				+0.3
3,707,420	-				+0.3
3,707,436	+				-0.7
3,707,451	+				-0.7
3,707,451	+				-0.7
3,707,451	+				-0.7
3,707,451	+				+0.3
3,707,452	-				-1.2
3,707,452	-				-1.2
3,707,452	-				-1.7
3,707,452	-				-1.7
3,707,457	+				-1.7
3,707,458	-				-0.7
3,707,458	-				+0.3
3,707,482	+				+0.3
3,707,483	-				+0.3
3,707,572	+				-0.7
3,707,572	+				-0.7
3,707,573	-				-0.7
3,707,590	-				-0.6
3,707,669	+				-0.9
3,707,669	+				+0.3
3,707,670	-				-0.7
3,707,675	+				-1.2
3,707,675	+				-0.7
3,707,675	+				+0.3
3,707,675	+				-0.7
3,707,676	-				+0.3
3,707,676	-				+0.3
3,707,862	-				-0.7
3,707,867	+				+0.3
3,707,868	-				-0.5
3,707,868	-				+0.3
3,707,898	+				-1.5
3,707,898	+				+0.3
3,707,898	+				-0.5
3,707,898	+				-0.2
3,707,898	+				+0.3
3,707,899	-				-1.2
3,707,899	-				+0.3
3,707,899	-				-0.7
3,707,899	-				-0.3
3,707,990	+				-0.7
3,707,991	-				-0.5
3,708,255	-		Pf6N2E2_3210	0.34	-1.2
3,708,255	-		Pf6N2E2_3210	0.34	-1.2
3,708,380	-		Pf6N2E2_3210	0.45	+0.5
3,708,392	+		Pf6N2E2_3210	0.46	+0.1
3,708,392	+		Pf6N2E2_3210	0.46	+0.3
3,708,392	+		Pf6N2E2_3210	0.46	-1.2
3,708,393	-		Pf6N2E2_3210	0.46	+0.3
3,708,393	-		Pf6N2E2_3210	0.46	-0.7
3,708,393	-		Pf6N2E2_3210	0.46	-0.7
3,708,393	-		Pf6N2E2_3210	0.46	+0.8
3,708,442	-		Pf6N2E2_3210	0.51	+0.2
3,708,442	-		Pf6N2E2_3210	0.51	-0.9
3,708,602	+		Pf6N2E2_3210	0.65	+0.3
3,708,602	+		Pf6N2E2_3210	0.65	+0.3
3,708,603	-		Pf6N2E2_3210	0.66	+0.3
3,708,899	+				-0.7
3,708,899	+				-2.0
3,708,900	-				-0.7
3,708,900	-				+0.3
3,708,900	-				-0.9
3,708,952	+				+0.3
3,708,952	+				-1.0
3,708,953	-				+0.3
3,709,018	+				+0.3
3,709,019	-				-0.7
3,709,042	+				-0.7
3,709,042	+				+0.3
3,709,042	+				+0.3
3,709,057	+				-0.7
3,709,057	+				-0.7
3,709,058	-				-0.7
3,709,148	-				+0.3
3,709,159	+				+0.3
3,709,159	+				+0.3
3,709,160	-				+0.3
3,709,160	-				-0.7
3,709,210	+		Pf6N2E2_3211	0.11	-0.7
3,709,211	-		Pf6N2E2_3211	0.11	+0.3
3,709,297	+		Pf6N2E2_3211	0.14	+0.3
3,709,297	+		Pf6N2E2_3211	0.14	-1.2
3,709,297	+		Pf6N2E2_3211	0.14	+0.3
3,709,297	+		Pf6N2E2_3211	0.14	-0.7
3,709,297	+		Pf6N2E2_3211	0.14	-0.1
3,709,525	+		Pf6N2E2_3211	0.24	-0.5
3,709,525	+		Pf6N2E2_3211	0.24	+0.3
3,709,525	+		Pf6N2E2_3211	0.24	+0.3
3,709,525	+		Pf6N2E2_3211	0.24	+1.3
3,709,529	+		Pf6N2E2_3211	0.24	-2.5
3,709,529	+		Pf6N2E2_3211	0.24	-1.8
3,709,529	+		Pf6N2E2_3211	0.24	-1.2
3,709,530	-		Pf6N2E2_3211	0.24	+0.3
3,709,540	+		Pf6N2E2_3211	0.25	-0.7
3,709,540	+		Pf6N2E2_3211	0.25	+0.3
3,709,541	-		Pf6N2E2_3211	0.25	+0.3
3,709,561	+		Pf6N2E2_3211	0.26	-0.2
3,709,700	-		Pf6N2E2_3211	0.31	-0.7
3,709,720	+		Pf6N2E2_3211	0.32	-0.2
3,709,720	+		Pf6N2E2_3211	0.32	-0.7
3,709,721	-		Pf6N2E2_3211	0.32	+0.3
3,709,747	+		Pf6N2E2_3211	0.33	-0.3