Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_972

Experiment: Ying_OrganicAcid7 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 3
1,139,220	-				+0.1
1,139,220	-				-1.3
1,139,493	+				+0.1
1,139,550	+				+0.1
1,139,550	+				+0.1
1,139,550	+				-0.9
1,139,651	+				-1.7
1,139,653	+				+0.1
1,139,743	-				+0.1
1,139,935	+		Pf6N2E2_971	0.64	-0.2
1,139,935	+		Pf6N2E2_971	0.64	-0.9
1,139,935	+		Pf6N2E2_971	0.64	-0.4
1,140,033	+				+0.1
1,140,286	-		Pf6N2E2_972	0.11	-0.9
1,140,681	+		Pf6N2E2_972	0.31	+0.1
1,140,682	-		Pf6N2E2_972	0.31	+0.1
1,140,851	+		Pf6N2E2_972	0.40	-0.9
1,140,852	-		Pf6N2E2_972	0.40	-0.7
1,141,082	+		Pf6N2E2_972	0.51	+0.1
1,141,122	+		Pf6N2E2_972	0.53	+0.1
1,141,257	+		Pf6N2E2_972	0.60	-0.9
1,141,490	+		Pf6N2E2_972	0.72	+0.4
1,141,507	+		Pf6N2E2_972	0.73	-0.9
1,141,508	-		Pf6N2E2_972	0.73	+0.1
1,141,537	-		Pf6N2E2_972	0.75	+0.1
1,141,537	-		Pf6N2E2_972	0.75	+0.1
1,141,602	+		Pf6N2E2_972	0.78	+0.1
1,141,602	+		Pf6N2E2_972	0.78	+0.1
1,141,603	-		Pf6N2E2_972	0.78	+0.1
1,141,682	+		Pf6N2E2_972	0.82	+0.1
1,141,682	+		Pf6N2E2_972	0.82	+0.1
1,141,683	-		Pf6N2E2_972	0.82	+0.1
1,141,683	-		Pf6N2E2_972	0.82	-0.4
1,141,699	+		Pf6N2E2_972	0.83	+0.1
1,141,758	+		Pf6N2E2_972	0.86	+0.1
1,141,759	-		Pf6N2E2_972	0.86	+0.1
1,141,846	+				+0.1
1,141,883	+				-0.9
1,141,884	-				+0.1
1,141,884	-				-0.9
1,141,920	+				+0.1
1,142,037	+				-0.5
1,142,037	+				+0.1
1,142,037	+				+1.7
1,142,037	+				-2.5
1,142,038	-				-0.9
1,142,038	-				+0.1
1,142,038	-				+0.1
1,142,093	+				-0.3
1,142,093	+				+0.1
1,142,122	+				+0.1
1,142,122	+				-1.0
1,142,122	+				+0.1
1,142,122	+				-0.5
1,142,123	-				+0.7
1,142,125	+				+0.1
1,142,125	+				-1.5
1,142,126	-				-0.9
1,142,126	-				-0.7
1,142,126	-				+0.1
1,142,160	+				+0.1
1,142,161	-				-0.3
1,142,163	+				-0.1
1,142,163	+				-0.9
1,142,163	+				+0.1
1,142,170	+				+0.1
1,142,171	-				+0.1
1,142,171	-				+0.1
1,142,171	-				+0.1
1,142,246	-				+0.1
1,142,258	-				-1.0
1,142,508	+		Pf6N2E2_973	0.53	+0.1
1,142,509	-		Pf6N2E2_973	0.53	+0.1
1,142,509	-		Pf6N2E2_973	0.53	+0.1
1,142,509	-		Pf6N2E2_973	0.53	+0.1
1,142,509	-		Pf6N2E2_973	0.53	-1.7
1,142,509	-		Pf6N2E2_973	0.53	+0.1
1,142,519	+		Pf6N2E2_973	0.55	-0.9
1,142,527	-		Pf6N2E2_973	0.57	+0.1
1,142,591	+		Pf6N2E2_973	0.70	+0.1
1,142,591	+		Pf6N2E2_973	0.70	-0.9
1,142,592	-		Pf6N2E2_973	0.70	+1.1
1,142,595	+		Pf6N2E2_973	0.71	-0.7
1,142,734	+				+0.1
1,142,734	+				+0.1
1,142,734	+				-0.9
1,142,734	+				-0.9
1,142,734	+				+0.1
1,142,734	+				+0.1
1,142,734	+				-0.9
1,142,734	+				-1.0
1,142,735	-				-0.9
1,142,735	-				+0.1
1,142,735	-				+0.1
1,142,735	-				-0.5
1,142,736	+				-2.7
1,142,736	+				-0.9
1,142,889	+		Pf6N2E2_974	0.42	+0.1