Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5893

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
6,711,983	+		Pf6N2E2_5892	0.70	+0.1
6,711,983	+		Pf6N2E2_5892	0.70	+0.4
6,711,983	+		Pf6N2E2_5892	0.70	-0.1
6,711,983	+		Pf6N2E2_5892	0.70	+0.4
6,711,984	-		Pf6N2E2_5892	0.70	+0.4
6,712,333	+		Pf6N2E2_5892	0.87	+0.4
6,712,333	+		Pf6N2E2_5892	0.87	-0.6
6,712,333	+		Pf6N2E2_5892	0.87	-2.8
6,712,359	-		Pf6N2E2_5892	0.89	-1.5
6,712,631	+				+0.4
6,712,631	+				-0.5
6,712,632	-				-0.6
6,712,632	-				-0.6
6,712,639	+				+2.0
6,712,639	+				+0.6
6,712,645	-				+0.4
6,712,776	-				+0.4
6,712,785	-				+0.4
6,712,920	-		Pf6N2E2_5893	0.19	-0.6
6,712,937	+		Pf6N2E2_5893	0.21	+0.4
6,712,937	+		Pf6N2E2_5893	0.21	-1.2
6,712,937	+		Pf6N2E2_5893	0.21	-0.6
6,712,938	-		Pf6N2E2_5893	0.21	-0.4
6,712,938	-		Pf6N2E2_5893	0.21	-0.6
6,712,967	+		Pf6N2E2_5893	0.25	-0.6
6,712,967	+		Pf6N2E2_5893	0.25	+1.4
6,712,968	-		Pf6N2E2_5893	0.25	-0.2
6,712,968	-		Pf6N2E2_5893	0.25	+0.4
6,713,415	+		Pf6N2E2_5893	0.84	+0.4
6,713,416	-		Pf6N2E2_5893	0.84	+0.4
6,713,431	+		Pf6N2E2_5893	0.86	+0.4
6,713,432	-		Pf6N2E2_5893	0.86	+0.4
6,713,432	-		Pf6N2E2_5893	0.86	-0.6
6,713,432	-		Pf6N2E2_5893	0.86	-1.8
6,713,432	-		Pf6N2E2_5893	0.86	+0.4
6,713,432	-		Pf6N2E2_5893	0.86	+0.4
6,713,483	+				+0.4
6,713,483	+				+0.4
6,713,484	-				+0.4
6,713,484	-				+0.4
6,713,562	+				+0.4
6,713,588	-				+0.4
6,713,610	+				-0.3
6,713,610	+				+0.4
6,713,611	-				+0.4
6,713,630	-				-1.2
6,713,649	+				+0.4
6,713,651	+				+0.4
6,713,651	+				-0.5
6,713,651	+				-0.6
6,713,651	+				+0.4
6,713,652	-				-1.9
6,713,702	+				+0.4
6,713,702	+				-0.6
6,713,703	-				-0.9
6,713,704	+				+0.4
6,713,704	+				-0.6
6,713,704	+				-0.6
6,713,705	-				-1.2
6,713,727	+				-0.6
6,713,727	+				+0.4
6,713,727	+				+0.4
6,713,727	+				+0.4
6,713,728	-				-0.6
6,713,728	-				-0.6
6,713,729	+				+0.4
6,713,900	+				+0.4
6,713,900	+				+0.4
6,714,140	+				-0.8
6,714,140	+				-1.2
6,714,394	+				+0.4
6,714,465	+				+0.4
6,714,469	-				-0.6